RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 FAM47CQ5HY64 1035 aa12.55□□□□□ -0.4
SHF-203ENST00000558294 TMEM67Q5HYA8 995 aa12.55□□□□□ -0.4
SHF-203ENST00000558294 ZNF589Q86UQ0 364 aaPredicted RBP12.55□□□□□ -0.4
SHF-203ENST00000558294 TICAM2Q86XR7 235 aa12.55□□□□□ -0.4
SHF-203ENST00000558294 DNERQ8NFT8 737 aa12.55□□□□□ -0.4
SHF-203ENST00000558294 SLC9A7Q96T83 725 aa12.55□□□□□ -0.4
SHF-203ENST00000558294 MPHOSPH6Q99547 160 aaKnown RBP12.55□□□□□ -0.4
SHF-203ENST00000558294 ARIH2O95376 493 aa12.54□□□□□ -0.4
SHF-203ENST00000558294 IQCF3P0C7M6 154 aa12.54□□□□□ -0.4
SHF-203ENST00000558294 TXNP10599 105 aaKnown RBP12.54□□□□□ -0.4
SHF-203ENST00000558294 PCP11498 1178 aaKnown RBP12.54□□□□□ -0.4
SHF-203ENST00000558294 ACTN1P12814 892 aa12.54□□□□□ -0.4
SHF-203ENST00000558294 POU3F3P20264 500 aaPredicted RBP12.54□□□□□ -0.4
SHF-203ENST00000558294 IRX6P78412 446 aaPredicted RBP12.54□□□□□ -0.4
SHF-203ENST00000558294 NMIQ13287 307 aaPredicted RBP12.54□□□□□ -0.4
SHF-203ENST00000558294 TBC1D10CQ8IV04 446 aa12.54□□□□□ -0.4
SHF-203ENST00000558294 MICALL1Q8N3F8 863 aa12.54□□□□□ -0.4
SHF-203ENST00000558294 RGS22Q8NE09 1264 aa12.54□□□□□ -0.4
SHF-203ENST00000558294 EXOC6Q8TAG9 804 aa12.54□□□□□ -0.4
SHF-203ENST00000558294 PHOSPHO2Q8TCD6 241 aa12.54□□□□□ -0.4
SHF-203ENST00000558294 TSPYL2Q9H2G4 693 aaPredicted RBP12.54□□□□□ -0.4
SHF-203ENST00000558294 ZBTB47Q9UFB7 747 aaPredicted RBP12.54□□□□□ -0.4
SHF-203ENST00000558294 MYO9BQ13459 2157 aa12.54□□□□□ -0.4
SHF-203ENST00000558294 EPOPA6NHQ4 379 aa12.53□□□□□ -0.4
SHF-203ENST00000558294 RFXAPO00287 272 aa12.53□□□□□ -0.4
SHF-203ENST00000558294 BMP1P13497 986 aa12.53□□□□□ -0.4
SHF-203ENST00000558294 USH1GQ495M9 461 aa12.53□□□□□ -0.4
SHF-203ENST00000558294 GPATCH4Q5T3I0 446 aaKnown RBP12.53□□□□□ -0.4
SHF-203ENST00000558294 CCDC62Q6P9F0 684 aa12.53□□□□□ -0.4
SHF-203ENST00000558294 MFSD6Q6ZSS7 791 aa12.53□□□□□ -0.4
SHF-203ENST00000558294 HERC6Q8IVU3 1022 aa12.53□□□□□ -0.4
SHF-203ENST00000558294 RETREG2Q8NC44 543 aa12.53□□□□□ -0.4
SHF-203ENST00000558294 IL27Q8NEV9 243 aa12.53□□□□□ -0.4
SHF-203ENST00000558294 CPVLQ9H3G5 476 aa12.53□□□□□ -0.4
SHF-203ENST00000558294 MTCH2Q9Y6C9 303 aa12.53□□□□□ -0.4
SHF-203ENST00000558294 CCDC171Q6TFL3 1326 aa12.53□□□□□ -0.4
SHF-203ENST00000558294 PTPRSQ13332 1948 aa12.52□□□□□ -0.4
SHF-203ENST00000558294 B4DLN1 442 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 ARHGEF15O94989 841 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 GOLGA8HP0CJ92 632 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 MRPL12P52815 198 aaKnown RBP12.52□□□□□ -0.41
SHF-203ENST00000558294 TFF2Q03403 129 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 TAP1Q03518 808 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 BFSP2Q13515 415 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 HDAC1Q13547 482 aaPredicted RBP12.52□□□□□ -0.41
SHF-203ENST00000558294 SESTD1Q86VW0 696 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 CTAGE1Q96RT6 745 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 ZKSCAN3Q9BRR0 538 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 UBA5Q9GZZ9 404 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 MAF1Q9H063 256 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 CERS4Q9HA82 394 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 LAMA4Q16363 1823 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 NEDD4P46934 1319 aa12.52□□□□□ -0.41
SHF-203ENST00000558294 BAIAP3O94812 1187 aa12.51□□□□□ -0.41
SHF-203ENST00000558294 MMP3P08254 477 aa12.51□□□□□ -0.41
SHF-203ENST00000558294 ARHGAP1Q07960 439 aa12.51□□□□□ -0.41
SHF-203ENST00000558294 GPNMBQ14956 572 aa12.51□□□□□ -0.41
SHF-203ENST00000558294 PTGISQ16647 500 aa12.51□□□□□ -0.41
SHF-203ENST00000558294 DGKHQ86XP1 1220 aa12.51□□□□□ -0.41
SHF-203ENST00000558294 SYTL5Q8TDW5 730 aaPredicted RBP12.51□□□□□ -0.41
SHF-203ENST00000558294 AFG1LQ8WV93 481 aa12.51□□□□□ -0.41
SHF-203ENST00000558294 TBC1D5Q92609 795 aa12.51□□□□□ -0.41
SHF-203ENST00000558294 ESR2Q92731 530 aa12.51□□□□□ -0.41
SHF-203ENST00000558294 NECAB3Q96P71 396 aaPredicted RBP12.51□□□□□ -0.41
SHF-203ENST00000558294 FTOQ9C0B1 505 aaKnown RBP eCLIP12.51□□□□□ -0.41
SHF-203ENST00000558294 RNF41Q9H4P4 317 aaPredicted RBP12.51□□□□□ -0.41
SHF-203ENST00000558294 COL20A1Q9P218 1284 aa12.51□□□□□ -0.41
SHF-203ENST00000558294 RAPGEFL1Q9UHV5 662 aa12.51□□□□□ -0.41
SHF-203ENST00000558294 NOD1Q9Y239 953 aa12.51□□□□□ -0.41
SHF-203ENST00000558294 COL4A4P53420 1690 aaPredicted RBP12.51□□□□□ -0.41
SHF-203ENST00000558294 KIAA1217Q5T5P2 1943 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 TCF20Q9UGU0 1960 aaKnown RBP12.5□□□□□ -0.41
SHF-203ENST00000558294 TET1Q8NFU7 2136 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 TRIM6-TRIM34B2RNG4 842 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 GTPBP6O43824 516 aaPredicted RBP12.5□□□□□ -0.41
SHF-203ENST00000558294 KCNQ1P51787 676 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 SKIV2LQ15477 1246 aaKnown RBP12.5□□□□□ -0.41
SHF-203ENST00000558294 CDC37Q16543 378 aaPredicted RBP12.5□□□□□ -0.41
SHF-203ENST00000558294 LY6KQ17RY6 165 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 AAK1Q2M2I8 961 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 KRT40Q6A162 431 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 GDF6Q6KF10 455 aaPredicted RBP12.5□□□□□ -0.41
SHF-203ENST00000558294 SEPT14Q6ZU15 432 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 PNMA1Q8ND90 353 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 CAGE1Q8TC20 777 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 AFAP1L1Q8TED9 768 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 ARNTL2Q8WYA1 636 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 KAT2BQ92831 832 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 TAAR1Q96RJ0 339 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 ABCB11O95342 1321 aa12.5□□□□□ -0.41
SHF-203ENST00000558294 KIF28PB7ZC32 967 aa12.49□□□□□ -0.41
SHF-203ENST00000558294 GH1P01241 217 aa12.49□□□□□ -0.41
SHF-203ENST00000558294 SDSP20132 328 aa12.49□□□□□ -0.41
SHF-203ENST00000558294 NT5C2P49902 561 aa12.49□□□□□ -0.41
SHF-203ENST00000558294 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
SHF-203ENST00000558294 CHMP4BP1P59074 171 aa12.49□□□□□ -0.41
SHF-203ENST00000558294 RBL2Q08999 1139 aa12.49□□□□□ -0.41
SHF-203ENST00000558294 AAMPQ13685 434 aa12.49□□□□□ -0.41
SHF-203ENST00000558294 STXBP2Q15833 593 aa12.49□□□□□ -0.41
SHF-203ENST00000558294 SPRED2Q7Z698 418 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms