RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 BTBD18B2RXH4 712 aa13.15□□□□□ -0.3
RORA-207ENST00000558234 PPP6R2O75170 966 aa13.15□□□□□ -0.3
RORA-207ENST00000558234 SLC39A14Q15043 492 aa13.15□□□□□ -0.3
RORA-207ENST00000558234 PCDHA4Q9UN74 947 aa13.15□□□□□ -0.3
RORA-207ENST00000558234 RBM47A0AV96 593 aaKnown RBP13.14□□□□□ -0.31
RORA-207ENST00000558234 CYP3A4P08684 503 aa13.14□□□□□ -0.31
RORA-207ENST00000558234 NKX3-2P78367 333 aa13.14□□□□□ -0.31
RORA-207ENST00000558234 KCNJ14Q9UNX9 436 aa13.14□□□□□ -0.31
RORA-207ENST00000558234 A0A1W2PQ27 194 aa13.14□□□□□ -0.31
RORA-207ENST00000558234 A0A1W2PQ64 194 aa13.14□□□□□ -0.31
RORA-207ENST00000558234 A0A1W2PQD8 194 aa13.14□□□□□ -0.31
RORA-207ENST00000558234 SP3Q02447 781 aa13.14□□□□□ -0.31
RORA-207ENST00000558234 MAP3K21Q5TCX8 1036 aa13.14□□□□□ -0.31
RORA-207ENST00000558234 VPS54Q9P1Q0 977 aa13.14□□□□□ -0.31
RORA-207ENST00000558234 MTMR7Q9Y216 660 aa13.14□□□□□ -0.31
RORA-207ENST00000558234 MRPL11Q9Y3B7 192 aaKnown RBP13.14□□□□□ -0.31
RORA-207ENST00000558234 MSL3Q8N5Y2 521 aaKnown RBP13.14□□□□□ -0.31
RORA-207ENST00000558234 NPLOC4Q8TAT6 608 aa13.14□□□□□ -0.31
RORA-207ENST00000558234 CFAP45Q9UL16 551 aa13.14□□□□□ -0.31
RORA-207ENST00000558234 RGS20O76081 388 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 LIG1P18858 919 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 NR5A1Q13285 461 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 PLEKHH3Q7Z736 793 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 TFIP11Q9UBB9 837 aaKnown RBP13.13□□□□□ -0.31
RORA-207ENST00000558234 PCDHA7Q9UN72 937 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 CYP3A7-CYP3A51PA0A087WV96 503 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 H3BQV1 296 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 CYP3A7P24462 503 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 IFFO2Q5TF58 517 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 DNERQ8NFT8 737 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 LENG9Q96B70 501 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 LOXHD1Q8IVV2 1947 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 GOLGA6L22H0YM25 854 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 RPS6P62753 249 aaKnown RBP13.13□□□□□ -0.31
RORA-207ENST00000558234 TRAF1Q13077 416 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 ADALQ6DHV7 355 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 SMCR8Q8TEV9 937 aaPredicted RBP13.13□□□□□ -0.31
RORA-207ENST00000558234 SYNGAP1Q96PV0 1343 aa13.13□□□□□ -0.31
RORA-207ENST00000558234 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 SREBF1P36956 1147 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 CPLX2Q6PUV4 134 aaKnown RBP13.12□□□□□ -0.31
RORA-207ENST00000558234 DIS3L2Q8IYB7 885 aaKnown RBP13.12□□□□□ -0.31
RORA-207ENST00000558234 VAT1LQ9HCJ6 419 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 GABRQQ9UN88 632 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 DDX49Q9Y6V7 483 aaKnown RBP13.12□□□□□ -0.31
RORA-207ENST00000558234 CIITAP33076 1130 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 MAP2K5Q13163 448 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 AP3B2Q13367 1082 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 ANO1Q5XXA6 986 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 TRIM22Q8IYM9 498 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 FMR1NBQ8N0W7 255 aaPredicted RBP13.12□□□□□ -0.31
RORA-207ENST00000558234 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 SOCS4Q8WXH5 440 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 SEC63Q9UGP8 760 aaKnown RBP13.12□□□□□ -0.31
RORA-207ENST00000558234 ALPK3Q96L96 1907 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 IGLV3-22A0A075B6J6 115 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 FIBPO43427 364 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 FKTNO75072 461 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 ADORA2AP29274 412 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 CCNA1P78396 465 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 HOMER1Q86YM7 354 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
RORA-207ENST00000558234 PXMP2Q9NR77 195 aa13.12□□□□□ -0.31
RORA-207ENST00000558234 FBXO2Q9UK22 296 aaPredicted RBP13.12□□□□□ -0.31
RORA-207ENST00000558234 USH1GQ495M9 461 aa13.11□□□□□ -0.31
RORA-207ENST00000558234 MCF2L2Q86YR7 1114 aa13.11□□□□□ -0.31
RORA-207ENST00000558234 MAML3Q96JK9 1138 aa13.11□□□□□ -0.31
RORA-207ENST00000558234 SPATA32Q96LK8 384 aa13.11□□□□□ -0.31
RORA-207ENST00000558234 PAGR1Q9BTK6 254 aa13.11□□□□□ -0.31
RORA-207ENST00000558234 ISY1Q9ULR0 285 aaKnown RBP13.11□□□□□ -0.31
RORA-207ENST00000558234 HSPA1AP0DMV8 641 aaKnown RBP13.11□□□□□ -0.31
RORA-207ENST00000558234 HSPA1BP0DMV9 641 aaKnown RBP13.11□□□□□ -0.31
RORA-207ENST00000558234 PAXIP1Q6ZW49 1069 aaPredicted RBP13.11□□□□□ -0.31
RORA-207ENST00000558234 HEATR3Q7Z4Q2 680 aa13.11□□□□□ -0.31
RORA-207ENST00000558234 CD99L2Q8TCZ2 262 aa13.11□□□□□ -0.31
RORA-207ENST00000558234 GLT8D2Q9H1C3 349 aa13.11□□□□□ -0.31
RORA-207ENST00000558234 SRRDQ9UH36 339 aa13.11□□□□□ -0.31
RORA-207ENST00000558234 SMCO2A6NFE2 343 aa13.11□□□□□ -0.31
RORA-207ENST00000558234 ALDH5A1P51649 535 aaPredicted RBP13.11□□□□□ -0.31
RORA-207ENST00000558234 MRPS9P82933 396 aaKnown RBP13.11□□□□□ -0.31
RORA-207ENST00000558234 CCDC148Q8NFR7 591 aa13.11□□□□□ -0.31
RORA-207ENST00000558234 IL31RAQ8NI17 732 aa13.11□□□□□ -0.31
RORA-207ENST00000558234 ALAS1P13196 640 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 ADCY7P51828 1080 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 PRMT2P55345 433 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 SEMA3FQ13275 785 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 PGM5Q15124 567 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 IL17AQ16552 155 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 FOXD4L6Q3SYB3 417 aaPredicted RBP13.1□□□□□ -0.31
RORA-207ENST00000558234 FOXD4L3Q6VB84 417 aaPredicted RBP13.1□□□□□ -0.31
RORA-207ENST00000558234 OTOP1Q7RTM1 612 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 ELOA2Q8IYF1 753 aaPredicted RBP13.1□□□□□ -0.31
RORA-207ENST00000558234 PXYLP1Q8TE99 480 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 CUL5Q93034 780 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 MMP19Q99542 508 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 APBA2Q99767 749 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 PSTPIP2Q9H939 334 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 PRDM10Q9NQV6 1147 aa13.1□□□□□ -0.31
RORA-207ENST00000558234 TMEM260Q9NX78 707 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms