RNA–Protein interactions for RNA: ENST00000557725.5

LGMN-219, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-219ENST00000557725 TCTN1Q2MV58 587 aa13.66□□□□□ -0.22
LGMN-219ENST00000557725 PPP4R3BQ5MIZ7 849 aa13.66□□□□□ -0.22
LGMN-219ENST00000557725 IL27Q8NEV9 243 aa13.66□□□□□ -0.22
LGMN-219ENST00000557725 ZKSCAN3Q9BRR0 538 aa13.66□□□□□ -0.22
LGMN-219ENST00000557725 FTOQ9C0B1 505 aaKnown RBP eCLIP13.66□□□□□ -0.22
LGMN-219ENST00000557725 GPHNQ9NQX3 736 aaPredicted RBP13.66□□□□□ -0.22
LGMN-219ENST00000557725 LCHNA4D1U4 455 aa13.65□□□□□ -0.22
LGMN-219ENST00000557725 SUPT20HL2P0C7V6 817 aa13.65□□□□□ -0.22
LGMN-219ENST00000557725 TXNP10599 105 aaKnown RBP13.65□□□□□ -0.22
LGMN-219ENST00000557725 EDNRBP24530 442 aa13.65□□□□□ -0.22
LGMN-219ENST00000557725 TAP1Q03518 808 aa13.65□□□□□ -0.22
LGMN-219ENST00000557725 ZNF543Q08ER8 600 aa13.65□□□□□ -0.22
LGMN-219ENST00000557725 NMIQ13287 307 aaPredicted RBP13.65□□□□□ -0.22
LGMN-219ENST00000557725 GPNMBQ14956 572 aa13.65□□□□□ -0.22
LGMN-219ENST00000557725 ANKRD45Q5TZF3 282 aa13.65□□□□□ -0.22
LGMN-219ENST00000557725 TBC1D10CQ8IV04 446 aa13.65□□□□□ -0.22
LGMN-219ENST00000557725 CTAGE1Q96RT6 745 aa13.65□□□□□ -0.22
LGMN-219ENST00000557725 SEZ6LQ9BYH1 1024 aa13.65□□□□□ -0.22
LGMN-219ENST00000557725 UBA5Q9GZZ9 404 aa13.65□□□□□ -0.22
LGMN-219ENST00000557725 A6NJR5 290 aa13.64□□□□□ -0.23
LGMN-219ENST00000557725 PFKMP08237 780 aa13.64□□□□□ -0.23
LGMN-219ENST00000557725 HSPD1P10809 573 aaKnown RBP13.64□□□□□ -0.23
LGMN-219ENST00000557725 ALX1Q15699 326 aa13.64□□□□□ -0.23
LGMN-219ENST00000557725 LY6KQ17RY6 165 aa13.64□□□□□ -0.23
LGMN-219ENST00000557725 GDF6Q6KF10 455 aaPredicted RBP13.64□□□□□ -0.23
LGMN-219ENST00000557725 CHST3Q7LGC8 479 aa13.64□□□□□ -0.23
LGMN-219ENST00000557725 HERC6Q8IVU3 1022 aa13.64□□□□□ -0.23
LGMN-219ENST00000557725 HELLSQ9NRZ9 838 aa13.64□□□□□ -0.23
LGMN-219ENST00000557725 COL20A1Q9P218 1284 aa13.64□□□□□ -0.23
LGMN-219ENST00000557725 NEDD4P46934 1319 aa13.64□□□□□ -0.23
LGMN-219ENST00000557725 KIAA1217Q5T5P2 1943 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 ACTN1P12814 892 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 PDE1AP54750 535 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 GRB10Q13322 594 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 PTGISQ16647 500 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 NFRKBQ6P4R8 1299 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 SEPT14Q6ZU15 432 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 RETREG2Q8NC44 543 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 SCFD2Q8WU76 684 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 AFG1LQ8WV93 481 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 DHX38Q92620 1227 aaKnown RBP13.63□□□□□ -0.23
LGMN-219ENST00000557725 EVI5LQ96CN4 794 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 SLC9A7Q96T83 725 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
LGMN-219ENST00000557725 EPHX3Q9H6B9 360 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 TCP11L1Q9NUJ3 509 aa13.63□□□□□ -0.23
LGMN-219ENST00000557725 SORBS3O60504 671 aa13.62□□□□□ -0.23
LGMN-219ENST00000557725 LPXNO60711 386 aa13.62□□□□□ -0.23
LGMN-219ENST00000557725 MMP3P08254 477 aa13.62□□□□□ -0.23
LGMN-219ENST00000557725 SNHG28P0DPA3 235 aa13.62□□□□□ -0.23
LGMN-219ENST00000557725 DEFB103AP81534 67 aa13.62□□□□□ -0.23
LGMN-219ENST00000557725 MCMDC2Q4G0Z9 681 aa13.62□□□□□ -0.23
LGMN-219ENST00000557725 CCDC62Q6P9F0 684 aa13.62□□□□□ -0.23
LGMN-219ENST00000557725 GDPD5Q8WTR4 605 aa13.62□□□□□ -0.23
LGMN-219ENST00000557725 KAT2BQ92831 832 aa13.62□□□□□ -0.23
LGMN-219ENST00000557725 KHSRPQ92945 711 aaKnown RBP eCLIP13.62□□□□□ -0.23
LGMN-219ENST00000557725 TAAR1Q96RJ0 339 aa13.62□□□□□ -0.23
LGMN-219ENST00000557725 NOD1Q9Y239 953 aa13.62□□□□□ -0.23
LGMN-219ENST00000557725 MYH6P13533 1939 aa13.62□□□□□ -0.23
LGMN-219ENST00000557725 MYH7BA7E2Y1 1941 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 LOC102724159A0A0B4J2E5 919 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 PITPNM1O00562 1244 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 NKRFO15226 690 aaKnown RBP eCLIP13.61□□□□□ -0.23
LGMN-219ENST00000557725 GTPBP6O43824 516 aaPredicted RBP13.61□□□□□ -0.23
LGMN-219ENST00000557725 TLL1O43897 1013 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 POU3F3P20264 500 aaPredicted RBP13.61□□□□□ -0.23
LGMN-219ENST00000557725 RFC2P35250 354 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 ARHGAP1Q07960 439 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 PWP2Q15269 919 aaKnown RBP13.61□□□□□ -0.23
LGMN-219ENST00000557725 DNERQ8NFT8 737 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 WNT8BQ93098 351 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 CRBNQ96SW2 442 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 MTUS1Q9ULD2 1270 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 LAMA4Q16363 1823 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 WDR19Q8NEZ3 1342 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 RAD50Q92878 1312 aa13.61□□□□□ -0.23
LGMN-219ENST00000557725 WDR5P61964 334 aaKnown RBP13.6□□□□□ -0.23
LGMN-219ENST00000557725 ZNF200P98182 395 aaPredicted RBP13.6□□□□□ -0.23
LGMN-219ENST00000557725 BFSP2Q13515 415 aa13.6□□□□□ -0.23
LGMN-219ENST00000557725 CDC37Q16543 378 aaPredicted RBP13.6□□□□□ -0.23
LGMN-219ENST00000557725 BRDTQ58F21 947 aaPredicted RBP13.6□□□□□ -0.23
LGMN-219ENST00000557725 FAM117BQ6P1L5 589 aa13.6□□□□□ -0.23
LGMN-219ENST00000557725 MFSD6Q6ZSS7 791 aa13.6□□□□□ -0.23
LGMN-219ENST00000557725 PHOSPHO2Q8TCD6 241 aa13.6□□□□□ -0.23
LGMN-219ENST00000557725 SYTL5Q8TDW5 730 aaPredicted RBP13.6□□□□□ -0.23
LGMN-219ENST00000557725 BRWD1Q9NSI6 2320 aa13.6□□□□□ -0.23
LGMN-219ENST00000557725 CCDC171Q6TFL3 1326 aa13.6□□□□□ -0.23
LGMN-219ENST00000557725 KPNA6O60684 536 aa13.59□□□□□ -0.23
LGMN-219ENST00000557725 NBNO60934 754 aa13.59□□□□□ -0.23
LGMN-219ENST00000557725 ZNF286BP0CG31 522 aa13.59□□□□□ -0.23
LGMN-219ENST00000557725 EIF2AK2P19525 551 aaKnown RBP13.59□□□□□ -0.23
LGMN-219ENST00000557725 PLA2G5P39877 138 aa13.59□□□□□ -0.23
LGMN-219ENST00000557725 PTPN11Q06124 597 aaPredicted RBP13.59□□□□□ -0.23
LGMN-219ENST00000557725 HIC1Q14526 733 aa13.59□□□□□ -0.23
LGMN-219ENST00000557725 LRRC8DQ7L1W4 858 aa13.59□□□□□ -0.23
LGMN-219ENST00000557725 ADGRF4Q8IZF3 695 aa13.59□□□□□ -0.23
LGMN-219ENST00000557725 RILPL2Q969X0 211 aa13.59□□□□□ -0.23
LGMN-219ENST00000557725 ZFP91Q96JP5 570 aaPredicted RBP13.59□□□□□ -0.23
LGMN-219ENST00000557725 ALG1Q9BT22 464 aa13.59□□□□□ -0.23
LGMN-219ENST00000557725 VAT1LQ9HCJ6 419 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms