RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 LRRC37A2A6NM11 1700 aa16.16■□□□□ 0.18
SUPT16H-208ENST00000557652 PGK2P07205 417 aa16.16■□□□□ 0.18
SUPT16H-208ENST00000557652 EDNRBP24530 442 aa16.16■□□□□ 0.18
SUPT16H-208ENST00000557652 ALDH5A1P51649 535 aaPredicted RBP16.16■□□□□ 0.18
SUPT16H-208ENST00000557652 CAP1Q01518 475 aa16.16■□□□□ 0.18
SUPT16H-208ENST00000557652 BLIDQ8IZY5 108 aa16.16■□□□□ 0.18
SUPT16H-208ENST00000557652 FBXO18Q8NFZ0 1043 aa16.16■□□□□ 0.18
SUPT16H-208ENST00000557652 ABHD16BQ9H3Z7 469 aa16.16■□□□□ 0.18
SUPT16H-208ENST00000557652 RPTORQ8N122 1335 aa16.16■□□□□ 0.18
SUPT16H-208ENST00000557652 MMP1P03956 469 aa16.15■□□□□ 0.18
SUPT16H-208ENST00000557652 GJB2P29033 226 aa16.15■□□□□ 0.18
SUPT16H-208ENST00000557652 ANP32AP39687 249 aaKnown RBP16.15■□□□□ 0.18
SUPT16H-208ENST00000557652 UBXN2AP68543 259 aa16.15■□□□□ 0.18
SUPT16H-208ENST00000557652 ARHGEF16Q5VV41 709 aa16.15■□□□□ 0.18
SUPT16H-208ENST00000557652 KRT25Q7Z3Z0 450 aa16.15■□□□□ 0.18
SUPT16H-208ENST00000557652 NPLOC4Q8TAT6 608 aa16.15■□□□□ 0.18
SUPT16H-208ENST00000557652 VTA1Q9NP79 307 aa16.15■□□□□ 0.18
SUPT16H-208ENST00000557652 PXMP2Q9NR77 195 aa16.15■□□□□ 0.18
SUPT16H-208ENST00000557652 CNPY2Q9Y2B0 182 aa16.15■□□□□ 0.18
SUPT16H-208ENST00000557652 PTCH2Q9Y6C5 1203 aa16.15■□□□□ 0.18
SUPT16H-208ENST00000557652 SOWAHBA6NEL2 793 aa16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 TAL1P17542 331 aaPredicted RBP16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 HOXA13P31271 388 aaPredicted RBP16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 KRT2P35908 639 aa16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 CNTN2Q02246 1040 aa16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 STXBP2Q15833 593 aa16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 SLC9C1Q4G0N8 1177 aa16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 KRT40Q6A162 431 aa16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 USP17L6PQ6QN14 398 aa16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 ARMCX2Q7L311 632 aa16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 TBC1D5Q92609 795 aa16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 FGD4Q96M96 766 aa16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 PDCD2LQ9BRP1 358 aa16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 FOXP1Q9H334 677 aaPredicted RBP16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 KIAA0100Q14667 2235 aaKnown RBP16.14■□□□□ 0.17
SUPT16H-208ENST00000557652 M0R2N6 131 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 MSCO60682 206 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 PPFIA3O75145 1194 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 EIF3JO75822 258 aaKnown RBP16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 NR3C2P08235 984 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 CCND2P30279 289 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 SREBF1P36956 1147 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 PDE4DQ08499 809 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 NPY5RQ15761 445 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 MAP3K21Q5TCX8 1036 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 PCNX4Q63HM2 1172 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 KCNV1Q6PIU1 500 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 VSIG10LQ86VR7 867 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 FCHSD1Q86WN1 690 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 TRIB2Q92519 343 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 ARMC5Q96C12 935 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 AIFM3Q96NN9 605 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 TAAR1Q96RJ0 339 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 NAP1L4Q99733 375 aaKnown RBP16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 ANO3Q9BYT9 981 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 COL20A1Q9P218 1284 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 PCDHA6Q9UN73 950 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 PCDHA8Q9Y5H6 950 aa16.13■□□□□ 0.17
SUPT16H-208ENST00000557652 MAFGO15525 162 aa16.12■□□□□ 0.17
SUPT16H-208ENST00000557652 CYP3A4P08684 503 aa16.12■□□□□ 0.17
SUPT16H-208ENST00000557652 USP11P51784 963 aa16.12■□□□□ 0.17
SUPT16H-208ENST00000557652 PGM5Q15124 567 aa16.12■□□□□ 0.17
SUPT16H-208ENST00000557652 LARP1BQ659C4 914 aaKnown RBP16.12■□□□□ 0.17
SUPT16H-208ENST00000557652 MOXD1Q6UVY6 613 aa16.12■□□□□ 0.17
SUPT16H-208ENST00000557652 CDHR1Q96JP9 859 aa16.12■□□□□ 0.17
SUPT16H-208ENST00000557652 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.12■□□□□ 0.17
SUPT16H-208ENST00000557652 CCDC194A0A1B0GVG4 234 aa16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 H3BQV1 296 aa16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 ECM2O94769 699 aaPredicted RBP16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 TGFB3P10600 412 aa16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 NONOQ15233 471 aaKnown RBP eCLIP16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 GNPTABQ3T906 1256 aa16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 IFFO2Q5TF58 517 aa16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 NIPA1Q7RTP0 329 aa16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 DIS3L2Q8IYB7 885 aaKnown RBP16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 SHISA4Q96DD7 197 aa16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 BIN2Q9UBW5 565 aaPredicted RBP16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 KCNJ14Q9UNX9 436 aa16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 ASTN1O14525 1302 aa16.11■□□□□ 0.17
SUPT16H-208ENST00000557652 NKRFO15226 690 aaKnown RBP eCLIP16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 SNAI1O95863 264 aaPredicted RBP16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 CYBAP13498 195 aa16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 EIF2AK2P19525 551 aaKnown RBP16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 ORC2Q13416 577 aaPredicted RBP16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 CCL14Q16627 93 aa16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 UBE2SQ16763 222 aa16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 SCFD2Q8WU76 684 aa16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 CRYGNQ8WXF5 182 aa16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 MCOLN1Q9GZU1 580 aa16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 HMX1Q9NP08 348 aaPredicted RBP16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 FLRT1Q9NZU1 646 aa16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 FRMPD3Q5JV73 1810 aa16.1■□□□□ 0.17
SUPT16H-208ENST00000557652 RBM47A0AV96 593 aaKnown RBP16.09■□□□□ 0.17
SUPT16H-208ENST00000557652 INHAP05111 366 aa16.09■□□□□ 0.17
SUPT16H-208ENST00000557652 PRKAR2AP13861 404 aaKnown RBP16.09■□□□□ 0.17
SUPT16H-208ENST00000557652 ELNP15502 786 aa16.09■□□□□ 0.17
SUPT16H-208ENST00000557652 GCFC2P16383 781 aaKnown RBP16.09■□□□□ 0.17
SUPT16H-208ENST00000557652 U2AF2P26368 475 aaKnown RBP eCLIP16.09■□□□□ 0.17
SUPT16H-208ENST00000557652 CIITAP33076 1130 aa16.09■□□□□ 0.17
SUPT16H-208ENST00000557652 TRAPPC10P48553 1259 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 210.4 ms