RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 XRCC5P13010 732 aaKnown RBP17.5■□□□□ 0.39
NEDD1-213ENST00000557644 ALDH5A1P51649 535 aaPredicted RBP17.5■□□□□ 0.39
NEDD1-213ENST00000557644 CTU1Q7Z7A3 348 aaKnown RBP17.5■□□□□ 0.39
NEDD1-213ENST00000557644 DIS3L2Q8IYB7 885 aaKnown RBP17.5■□□□□ 0.39
NEDD1-213ENST00000557644 FAM177A1Q8N128 213 aaPredicted RBP17.5■□□□□ 0.39
NEDD1-213ENST00000557644 IL31RAQ8NI17 732 aa17.5■□□□□ 0.39
NEDD1-213ENST00000557644 BICD2Q8TD16 824 aa17.5■□□□□ 0.39
NEDD1-213ENST00000557644 TRIB2Q92519 343 aa17.5■□□□□ 0.39
NEDD1-213ENST00000557644 MAF1Q9H063 256 aa17.5■□□□□ 0.39
NEDD1-213ENST00000557644 PXMP2Q9NR77 195 aa17.5■□□□□ 0.39
NEDD1-213ENST00000557644 SLC5A4Q9NY91 659 aa17.5■□□□□ 0.39
NEDD1-213ENST00000557644 SPDYE3A6NKU9 549 aa17.5■□□□□ 0.39
NEDD1-213ENST00000557644 SYT1P21579 422 aa17.5■□□□□ 0.39
NEDD1-213ENST00000557644 IRF5Q13568 498 aa17.5■□□□□ 0.39
NEDD1-213ENST00000557644 ARHGEF16Q5VV41 709 aa17.5■□□□□ 0.39
NEDD1-213ENST00000557644 GALNT17Q6IS24 598 aa17.5■□□□□ 0.39
NEDD1-213ENST00000557644 ZFP91Q96JP5 570 aaPredicted RBP17.5■□□□□ 0.39
NEDD1-213ENST00000557644 DIS3Q9Y2L1 958 aaKnown RBP17.5■□□□□ 0.39
NEDD1-213ENST00000557644 PTPN22Q9Y2R2 807 aa17.5■□□□□ 0.39
NEDD1-213ENST00000557644 KRT2P35908 639 aa17.49■□□□□ 0.39
NEDD1-213ENST00000557644 EARS2Q5JPH6 523 aaKnown RBP17.49■□□□□ 0.39
NEDD1-213ENST00000557644 DNERQ8NFT8 737 aa17.49■□□□□ 0.39
NEDD1-213ENST00000557644 NSUN6Q8TEA1 469 aaKnown RBP17.49■□□□□ 0.39
NEDD1-213ENST00000557644 ANO3Q9BYT9 981 aa17.49■□□□□ 0.39
NEDD1-213ENST00000557644 PRDM10Q9NQV6 1147 aa17.49■□□□□ 0.39
NEDD1-213ENST00000557644 ADD3Q9UEY8 706 aaKnown RBP17.49■□□□□ 0.39
NEDD1-213ENST00000557644 H3BQV1 296 aa17.48■□□□□ 0.39
NEDD1-213ENST00000557644 ADCY3O60266 1144 aa17.48■□□□□ 0.39
NEDD1-213ENST00000557644 IFFO2Q5TF58 517 aa17.48■□□□□ 0.39
NEDD1-213ENST00000557644 FAM205CA6NFA0 338 aa17.48■□□□□ 0.39
NEDD1-213ENST00000557644 CYP2C19P33261 490 aa17.48■□□□□ 0.39
NEDD1-213ENST00000557644 PRMT2P55345 433 aa17.48■□□□□ 0.39
NEDD1-213ENST00000557644 TRIM32Q13049 653 aa17.48■□□□□ 0.39
NEDD1-213ENST00000557644 TNFRSF25Q93038 417 aa17.48■□□□□ 0.39
NEDD1-213ENST00000557644 PDCD2LQ9BRP1 358 aa17.48■□□□□ 0.39
NEDD1-213ENST00000557644 PLXNA1Q9UIW2 1896 aa17.48■□□□□ 0.39
NEDD1-213ENST00000557644 RPTORQ8N122 1335 aa17.48■□□□□ 0.39
NEDD1-213ENST00000557644 KIF28PB7ZC32 967 aa17.47■□□□□ 0.39
NEDD1-213ENST00000557644 AP3B2Q13367 1082 aa17.47■□□□□ 0.39
NEDD1-213ENST00000557644 PGM5Q15124 567 aa17.47■□□□□ 0.39
NEDD1-213ENST00000557644 ARMCX2Q7L311 632 aa17.47■□□□□ 0.39
NEDD1-213ENST00000557644 ZNF467Q7Z7K2 595 aaPredicted RBP17.47■□□□□ 0.39
NEDD1-213ENST00000557644 TINF2Q9BSI4 451 aa17.47■□□□□ 0.39
NEDD1-213ENST00000557644 VPS37CA5D8V6 355 aaPredicted RBP17.47■□□□□ 0.39
NEDD1-213ENST00000557644 FOSP01100 380 aaPredicted RBP17.47■□□□□ 0.39
NEDD1-213ENST00000557644 IGHA2P01877 340 aa17.47■□□□□ 0.39
NEDD1-213ENST00000557644 SAFBQ15424 915 aaKnown RBP eCLIP17.47■□□□□ 0.39
NEDD1-213ENST00000557644 MAMDC4Q6UXC1 1216 aa17.47■□□□□ 0.39
NEDD1-213ENST00000557644 EEPD1Q7L9B9 569 aa17.47■□□□□ 0.39
NEDD1-213ENST00000557644 BRMS1Q9HCU9 246 aa17.47■□□□□ 0.39
NEDD1-213ENST00000557644 FRMPD4Q14CM0 1322 aa17.47■□□□□ 0.39
NEDD1-213ENST00000557644 SNAI1O95863 264 aaPredicted RBP17.46■□□□□ 0.39
NEDD1-213ENST00000557644 NR3C2P08235 984 aa17.46■□□□□ 0.39
NEDD1-213ENST00000557644 MYCLP12524 364 aaPredicted RBP17.46■□□□□ 0.39
NEDD1-213ENST00000557644 PDCP20941 246 aa17.46■□□□□ 0.39
NEDD1-213ENST00000557644 EDNRBP24530 442 aa17.46■□□□□ 0.39
NEDD1-213ENST00000557644 PKP1Q13835 747 aa17.46■□□□□ 0.39
NEDD1-213ENST00000557644 PRAMEF19Q5SWL8 479 aa17.46■□□□□ 0.39
NEDD1-213ENST00000557644 OLFML2BQ68BL8 750 aa17.46■□□□□ 0.39
NEDD1-213ENST00000557644 MCTP1Q6DN14 999 aa17.46■□□□□ 0.39
NEDD1-213ENST00000557644 PIK3AP1Q6ZUJ8 805 aa17.46■□□□□ 0.39
NEDD1-213ENST00000557644 TEX2Q8IWB9 1127 aa17.46■□□□□ 0.39
NEDD1-213ENST00000557644 SH3TC2Q8TF17 1288 aa17.46■□□□□ 0.39
NEDD1-213ENST00000557644 ASB14A6NK59 587 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 GRK4P32298 578 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 PXYLP1Q8TE99 480 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 TBCKQ8TEA7 893 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.45■□□□□ 0.38
NEDD1-213ENST00000557644 MTMR6Q9Y217 621 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 MCM3APO60318 1980 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 CCDC194A0A1B0GVG4 234 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 STX6O43752 255 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 EDIL3O43854 480 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 SREBF1P36956 1147 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 MRPS9P82933 396 aaKnown RBP17.45■□□□□ 0.38
NEDD1-213ENST00000557644 ARHGAP4P98171 946 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 PDE4DQ08499 809 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 INF2Q27J81 1249 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 FERMT3Q86UX7 667 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 VSIG10LQ86VR7 867 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 FBXO16Q8IX29 292 aaPredicted RBP17.45■□□□□ 0.38
NEDD1-213ENST00000557644 MORC4Q8TE76 937 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 IWS1Q96ST2 819 aa17.45■□□□□ 0.38
NEDD1-213ENST00000557644 FOXP1Q9H334 677 aaPredicted RBP17.45■□□□□ 0.38
NEDD1-213ENST00000557644 GNL2Q13823 731 aaKnown RBP17.44■□□□□ 0.38
NEDD1-213ENST00000557644 KRT25Q7Z3Z0 450 aa17.44■□□□□ 0.38
NEDD1-213ENST00000557644 SLAIN1Q8ND83 568 aa17.44■□□□□ 0.38
NEDD1-213ENST00000557644 CRYGNQ8WXF5 182 aa17.44■□□□□ 0.38
NEDD1-213ENST00000557644 RTEL1Q9NZ71 1219 aa17.44■□□□□ 0.38
NEDD1-213ENST00000557644 SYNGAP1Q96PV0 1343 aa17.44■□□□□ 0.38
NEDD1-213ENST00000557644 U2AF2P26368 475 aaKnown RBP eCLIP17.44■□□□□ 0.38
NEDD1-213ENST00000557644 NONOQ15233 471 aaKnown RBP eCLIP17.44■□□□□ 0.38
NEDD1-213ENST00000557644 FBXO46Q6PJ61 603 aaPredicted RBP17.44■□□□□ 0.38
NEDD1-213ENST00000557644 MSL3Q8N5Y2 521 aaKnown RBP17.44■□□□□ 0.38
NEDD1-213ENST00000557644 DAXXQ9UER7 740 aaPredicted RBP17.44■□□□□ 0.38
NEDD1-213ENST00000557644 HMGCRP04035 888 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 CACNB2Q08289 660 aaPredicted RBP17.43■□□□□ 0.38
NEDD1-213ENST00000557644 STXBP2Q15833 593 aa17.43■□□□□ 0.38
NEDD1-213ENST00000557644 FOXD4L5Q5VV16 416 aaPredicted RBP17.43■□□□□ 0.38
NEDD1-213ENST00000557644 MFSD14CQ5VZR4 134 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms