RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 TRIM6-TRIM34B2RNG4 842 aa20.05■□□□□ 0.8
NEDD1-210ENST00000557400 TXNP10599 105 aaKnown RBP20.05■□□□□ 0.8
NEDD1-210ENST00000557400 ACTN1P12814 892 aa20.05■□□□□ 0.8
NEDD1-210ENST00000557400 MFAP1P55081 439 aaKnown RBP20.05■□□□□ 0.8
NEDD1-210ENST00000557400 PTPN11Q06124 597 aaPredicted RBP20.05■□□□□ 0.8
NEDD1-210ENST00000557400 USH1GQ495M9 461 aa20.05■□□□□ 0.8
NEDD1-210ENST00000557400 TMEM67Q5HYA8 995 aa20.05■□□□□ 0.8
NEDD1-210ENST00000557400 ADAMTS19Q8TE59 1207 aa20.05■□□□□ 0.8
NEDD1-210ENST00000557400 COPS5Q92905 334 aa20.05■□□□□ 0.8
NEDD1-210ENST00000557400 MUC3AQ02505 3323 aa20.04■□□□□ 0.8
NEDD1-210ENST00000557400 DGKHQ86XP1 1220 aa20.04■□□□□ 0.8
NEDD1-210ENST00000557400 RETREG2Q8NC44 543 aa20.04■□□□□ 0.8
NEDD1-210ENST00000557400 IL27Q8NEV9 243 aa20.04■□□□□ 0.8
NEDD1-210ENST00000557400 PPP1R13LQ8WUF5 828 aa20.04■□□□□ 0.8
NEDD1-210ENST00000557400 MAF1Q9H063 256 aa20.04■□□□□ 0.8
NEDD1-210ENST00000557400 TSPYL2Q9H2G4 693 aaPredicted RBP20.04■□□□□ 0.8
NEDD1-210ENST00000557400 CHD7Q9P2D1 2997 aa20.04■□□□□ 0.8
NEDD1-210ENST00000557400 NEDD4P46934 1319 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 ARIH2O95376 493 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 CA3P07451 260 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 IQCF3P0C7M6 154 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 GOLGA8HP0CJ92 632 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 NT5C2P49902 561 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 BFSP2Q13515 415 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 RILPL2Q969X0 211 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 SLC9A7Q96T83 725 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 ZKSCAN3Q9BRR0 538 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 LNPKQ9C0E8 428 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 UBA5Q9GZZ9 404 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 NOD1Q9Y239 953 aa20.03■□□□□ 0.8
NEDD1-210ENST00000557400 ZNF213O14771 459 aa20.02■□□□□ 0.8
NEDD1-210ENST00000557400 CDC37Q16543 378 aaPredicted RBP20.02■□□□□ 0.8
NEDD1-210ENST00000557400 CCDC62Q6P9F0 684 aa20.02■□□□□ 0.8
NEDD1-210ENST00000557400 MICALL1Q8N3F8 863 aa20.02■□□□□ 0.8
NEDD1-210ENST00000557400 PHOSPHO2Q8TCD6 241 aa20.02■□□□□ 0.8
NEDD1-210ENST00000557400 UHRF1Q96T88 793 aaPredicted RBP20.02■□□□□ 0.8
NEDD1-210ENST00000557400 CPVLQ9H3G5 476 aa20.02■□□□□ 0.8
NEDD1-210ENST00000557400 SDSP20132 328 aa20.01■□□□□ 0.79
NEDD1-210ENST00000557400 CCDC178Q5BJE1 867 aa20.01■□□□□ 0.79
NEDD1-210ENST00000557400 IQCA1Q86XH1 822 aa20.01■□□□□ 0.79
NEDD1-210ENST00000557400 PNMA1Q8ND90 353 aa20.01■□□□□ 0.79
NEDD1-210ENST00000557400 AFG1LQ8WV93 481 aa20.01■□□□□ 0.79
NEDD1-210ENST00000557400 FTOQ9C0B1 505 aaKnown RBP eCLIP20.01■□□□□ 0.79
NEDD1-210ENST00000557400 ABCB11O95342 1321 aa20.01■□□□□ 0.79
NEDD1-210ENST00000557400 CHMP4BP1P59074 171 aa20■□□□□ 0.79
NEDD1-210ENST00000557400 SYTL5Q8TDW5 730 aaPredicted RBP20■□□□□ 0.79
NEDD1-210ENST00000557400 NSUN6Q8TEA1 469 aaKnown RBP20■□□□□ 0.79
NEDD1-210ENST00000557400 KAT14Q9H8E8 782 aa20■□□□□ 0.79
NEDD1-210ENST00000557400 GTPBP6O43824 516 aaPredicted RBP19.99■□□□□ 0.79
NEDD1-210ENST00000557400 KDM4AO75164 1064 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 GH1P01241 217 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 MMP3P08254 477 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 POU3F3P20264 500 aaPredicted RBP19.99■□□□□ 0.79
NEDD1-210ENST00000557400 PTGISQ16647 500 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 ASPRV1Q53RT3 343 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 SEPT14Q6ZU15 432 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 MCF2L2Q86YR7 1114 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 HERC6Q8IVU3 1022 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 ADGRF4Q8IZF3 695 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 CCDC155Q8N6L0 562 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 CAGE1Q8TC20 777 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 AFAP1L1Q8TED9 768 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 TBC1D5Q92609 795 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 ANKS1AQ92625 1134 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 TAAR1Q96RJ0 339 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 COL20A1Q9P218 1284 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 SCN10AQ9Y5Y9 1956 aa19.99■□□□□ 0.79
NEDD1-210ENST00000557400 KIF28PB7ZC32 967 aa19.98■□□□□ 0.79
NEDD1-210ENST00000557400 RFXAPO00287 272 aa19.98■□□□□ 0.79
NEDD1-210ENST00000557400 BAIAP3O94812 1187 aa19.98■□□□□ 0.79
NEDD1-210ENST00000557400 ARHGAP1Q07960 439 aa19.98■□□□□ 0.79
NEDD1-210ENST00000557400 SKIV2LQ15477 1246 aaKnown RBP19.98■□□□□ 0.79
NEDD1-210ENST00000557400 STXBP2Q15833 593 aa19.98■□□□□ 0.79
NEDD1-210ENST00000557400 LY6KQ17RY6 165 aa19.98■□□□□ 0.79
NEDD1-210ENST00000557400 SESTD1Q86VW0 696 aa19.98■□□□□ 0.79
NEDD1-210ENST00000557400 SMC5Q8IY18 1101 aa19.98■□□□□ 0.79
NEDD1-210ENST00000557400 IWS1Q96ST2 819 aa19.98■□□□□ 0.79
NEDD1-210ENST00000557400 ZSCAN10Q96SZ4 725 aaPredicted RBP19.98■□□□□ 0.79
NEDD1-210ENST00000557400 RMDN3Q96TC7 470 aa19.98■□□□□ 0.79
NEDD1-210ENST00000557400 CERS4Q9HA82 394 aa19.98■□□□□ 0.79
NEDD1-210ENST00000557400 MTCH2Q9Y6C9 303 aa19.98■□□□□ 0.79
NEDD1-210ENST00000557400 TAP1Q03518 808 aa19.97■□□□□ 0.79
NEDD1-210ENST00000557400 AAK1Q2M2I8 961 aa19.97■□□□□ 0.79
NEDD1-210ENST00000557400 QRICH1Q2TAL8 776 aa19.97■□□□□ 0.79
NEDD1-210ENST00000557400 CTAGE1Q96RT6 745 aa19.97■□□□□ 0.79
NEDD1-210ENST00000557400 DIAPH3Q9NSV4 1193 aa19.97■□□□□ 0.79
NEDD1-210ENST00000557400 MRPL11Q9Y3B7 192 aaKnown RBP19.97■□□□□ 0.79
NEDD1-210ENST00000557400 EPOPA6NHQ4 379 aa19.96■□□□□ 0.79
NEDD1-210ENST00000557400 B4E1Z4 1266 aa19.96■□□□□ 0.79
NEDD1-210ENST00000557400 DHX16O60231 1041 aaKnown RBP19.96■□□□□ 0.79
NEDD1-210ENST00000557400 ARHGEF15O94989 841 aa19.96■□□□□ 0.79
NEDD1-210ENST00000557400 CASTP20810 708 aaKnown RBP19.96■□□□□ 0.79
NEDD1-210ENST00000557400 COL9A1P20849 921 aa19.96■□□□□ 0.79
NEDD1-210ENST00000557400 KCNJ6P48051 423 aa19.96■□□□□ 0.79
NEDD1-210ENST00000557400 TFF2Q03403 129 aa19.96■□□□□ 0.79
NEDD1-210ENST00000557400 AAMPQ13685 434 aa19.96■□□□□ 0.79
NEDD1-210ENST00000557400 GDF6Q6KF10 455 aaPredicted RBP19.96■□□□□ 0.79
NEDD1-210ENST00000557400 CWC27Q6UX04 472 aaKnown RBP19.96■□□□□ 0.79
NEDD1-210ENST00000557400 CHST3Q7LGC8 479 aa19.96■□□□□ 0.79
NEDD1-210ENST00000557400 FBXO11Q86XK2 927 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms