RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 IWS1Q96ST2 819 aa14.28□□□□□ -0.12
ABCD4-225ENST00000556517 PXMP2Q9NR77 195 aa14.28□□□□□ -0.12
ABCD4-225ENST00000556517 COL20A1Q9P218 1284 aa14.28□□□□□ -0.12
ABCD4-225ENST00000556517 ZNF236Q9UL36 1845 aa14.28□□□□□ -0.12
ABCD4-225ENST00000556517 CIZ1Q9ULV3 898 aaPredicted RBP14.28□□□□□ -0.12
ABCD4-225ENST00000556517 MTMR6Q9Y217 621 aa14.28□□□□□ -0.12
ABCD4-225ENST00000556517 DIS3Q9Y2L1 958 aaKnown RBP14.28□□□□□ -0.12
ABCD4-225ENST00000556517 ATP6V1DQ9Y5K8 247 aa14.28□□□□□ -0.12
ABCD4-225ENST00000556517 PLXNB2O15031 1838 aa14.27□□□□□ -0.12
ABCD4-225ENST00000556517 ASB14A6NK59 587 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 M0R2N6 131 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 FOXN1O15353 648 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 HOXC6P09630 235 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 CCND2P30279 289 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 SREBF1P36956 1147 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 ALDH5A1P51649 535 aaPredicted RBP14.27□□□□□ -0.13
ABCD4-225ENST00000556517 PRMT2P55345 433 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 PRKCZQ05513 592 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 ZNF792Q3KQV3 632 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 XRRA1Q6P2D8 792 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 ZNF467Q7Z7K2 595 aaPredicted RBP14.27□□□□□ -0.13
ABCD4-225ENST00000556517 FERMT3Q86UX7 667 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 TRMT44Q8IYL2 757 aaKnown RBP14.27□□□□□ -0.13
ABCD4-225ENST00000556517 TBCKQ8TEA7 893 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 PGBD1Q96JS3 809 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 TAAR1Q96RJ0 339 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 NAP1L4Q99733 375 aaKnown RBP14.27□□□□□ -0.13
ABCD4-225ENST00000556517 SRRDQ9UH36 339 aa14.27□□□□□ -0.13
ABCD4-225ENST00000556517 COBLO75128 1261 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 XRCC5P13010 732 aaKnown RBP14.26□□□□□ -0.13
ABCD4-225ENST00000556517 CYP2B6P20813 491 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 CTGFP29279 349 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 ZNF76P36508 570 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 FLT3LGP49771 235 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 ARHGAP4P98171 946 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 PGM5Q15124 567 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 INF2Q27J81 1249 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 FOXD4L5Q5VV16 416 aaPredicted RBP14.26□□□□□ -0.13
ABCD4-225ENST00000556517 PCNX4Q63HM2 1172 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 NEK8Q86SG6 692 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 MSL3Q8N5Y2 521 aaKnown RBP14.26□□□□□ -0.13
ABCD4-225ENST00000556517 RAET1EQ8TD07 263 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 FOXD4L4Q8WXT5 416 aaPredicted RBP14.26□□□□□ -0.13
ABCD4-225ENST00000556517 MAML3Q96JK9 1138 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 CHMP5Q9NZZ3 219 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 TRIM17Q9Y577 477 aa14.26□□□□□ -0.13
ABCD4-225ENST00000556517 FRMPD4Q14CM0 1322 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 RPTORQ8N122 1335 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 SOWAHBA6NEL2 793 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 KIF28PB7ZC32 967 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 STAM2O75886 525 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 F13A1P00488 732 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 HSPA8P11142 646 aaKnown RBP14.25□□□□□ -0.13
ABCD4-225ENST00000556517 MYCLP12524 364 aaPredicted RBP14.25□□□□□ -0.13
ABCD4-225ENST00000556517 TRAPPC10P48553 1259 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 USP11P51784 963 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 LBX1P52954 281 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 UBXN2AP68543 259 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 STXBP2Q15833 593 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 RILPL1Q5EBL4 403 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 USP6NLQ92738 828 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 TNFRSF25Q93038 417 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 PURBQ96QR8 312 aaKnown RBP14.25□□□□□ -0.13
ABCD4-225ENST00000556517 PDCD2LQ9BRP1 358 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 GJD2Q9UKL4 321 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 CNPY2Q9Y2B0 182 aa14.25□□□□□ -0.13
ABCD4-225ENST00000556517 SYNGAP1Q96PV0 1343 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 ADAMTS3O15072 1205 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 BRD1O95696 1058 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 NR3C2P08235 984 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 GCFC2P16383 781 aaKnown RBP14.24□□□□□ -0.13
ABCD4-225ENST00000556517 DDIT3P35638 169 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 RESTQ13127 1097 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 IRF5Q13568 498 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 PKP1Q13835 747 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 LETM2Q2VYF4 491 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 GNPTABQ3T906 1256 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 MFSD14CQ5VZR4 134 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 OLFML2BQ68BL8 750 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 ARMCX2Q7L311 632 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 OTOP1Q7RTM1 612 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 GABRQQ9UN88 632 aa14.24□□□□□ -0.13
ABCD4-225ENST00000556517 CCNT1O60563 726 aaKnown RBP14.23□□□□□ -0.13
ABCD4-225ENST00000556517 EIF3JO75822 258 aaKnown RBP14.23□□□□□ -0.13
ABCD4-225ENST00000556517 CYP3A4P08684 503 aa14.23□□□□□ -0.13
ABCD4-225ENST00000556517 ATP2B1P20020 1258 aa14.23□□□□□ -0.13
ABCD4-225ENST00000556517 SETQ01105 290 aaPredicted RBP14.23□□□□□ -0.13
ABCD4-225ENST00000556517 MAMDC4Q6UXC1 1216 aa14.23□□□□□ -0.13
ABCD4-225ENST00000556517 NLRX1Q86UT6 975 aa14.23□□□□□ -0.13
ABCD4-225ENST00000556517 VSIG10LQ86VR7 867 aa14.23□□□□□ -0.13
ABCD4-225ENST00000556517 NPLOC4Q8TAT6 608 aa14.23□□□□□ -0.13
ABCD4-225ENST00000556517 ZNF396Q96N95 335 aaPredicted RBP14.23□□□□□ -0.13
ABCD4-225ENST00000556517 TINF2Q9BSI4 451 aa14.23□□□□□ -0.13
ABCD4-225ENST00000556517 ASTN1O14525 1302 aa14.22□□□□□ -0.13
ABCD4-225ENST00000556517 FAM205CA6NFA0 338 aa14.22□□□□□ -0.13
ABCD4-225ENST00000556517 ADCY3O60266 1144 aa14.22□□□□□ -0.13
ABCD4-225ENST00000556517 EDNRBP24530 442 aa14.22□□□□□ -0.13
ABCD4-225ENST00000556517 ORC2Q13416 577 aaPredicted RBP14.22□□□□□ -0.13
ABCD4-225ENST00000556517 CEP55Q53EZ4 464 aa14.22□□□□□ -0.13
ABCD4-225ENST00000556517 EARS2Q5JPH6 523 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms