RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 DNERQ8NFT8 737 aa16.88■□□□□ 0.29
CHMP4BP1-201ENST00000556017 ZKSCAN3Q9BRR0 538 aa16.88■□□□□ 0.29
CHMP4BP1-201ENST00000556017 UBA5Q9GZZ9 404 aa16.88■□□□□ 0.29
CHMP4BP1-201ENST00000556017 MTIF3Q9H2K0 278 aaKnown RBP16.88■□□□□ 0.29
CHMP4BP1-201ENST00000556017 THEGQ9P2T0 379 aa16.88■□□□□ 0.29
CHMP4BP1-201ENST00000556017 TNFRSF10AO00220 468 aa16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 IQCF3P0C7M6 154 aa16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 SUPT20HL2P0C7V6 817 aa16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 ATP2A2P16615 1042 aaKnown RBP16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 IGFBP4P22692 258 aa16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 PPP2R5BQ15173 497 aa16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 NFRKBQ6P4R8 1299 aa16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 SPRED2Q7Z698 418 aa16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 DEFB128Q7Z7B8 93 aa16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 SMC5Q8IY18 1101 aa16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 RGS22Q8NE09 1264 aa16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 SCFD2Q8WU76 684 aa16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 LNPKQ9C0E8 428 aa16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 COL4A4P53420 1690 aaPredicted RBP16.87■□□□□ 0.29
CHMP4BP1-201ENST00000556017 BRWD1Q9NSI6 2320 aa16.86■□□□□ 0.29
CHMP4BP1-201ENST00000556017 RFXAPO00287 272 aa16.86■□□□□ 0.29
CHMP4BP1-201ENST00000556017 PITPNM1O00562 1244 aa16.86■□□□□ 0.29
CHMP4BP1-201ENST00000556017 NKRFO15226 690 aaKnown RBP eCLIP16.86■□□□□ 0.29
CHMP4BP1-201ENST00000556017 SDSP20132 328 aa16.86■□□□□ 0.29
CHMP4BP1-201ENST00000556017 PDE4DQ08499 809 aa16.86■□□□□ 0.29
CHMP4BP1-201ENST00000556017 USH1GQ495M9 461 aa16.86■□□□□ 0.29
CHMP4BP1-201ENST00000556017 PPP2R2DQ66LE6 453 aa16.86■□□□□ 0.29
CHMP4BP1-201ENST00000556017 MFSD6Q6ZSS7 791 aa16.86■□□□□ 0.29
CHMP4BP1-201ENST00000556017 PLEKHM2Q8IWE5 1019 aa16.86■□□□□ 0.29
CHMP4BP1-201ENST00000556017 ANKS1AQ92625 1134 aa16.86■□□□□ 0.29
CHMP4BP1-201ENST00000556017 KAT2BQ92831 832 aa16.86■□□□□ 0.29
CHMP4BP1-201ENST00000556017 ZBBXA8MT70 800 aa16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 OPLAHO14841 1288 aa16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 CA3P07451 260 aa16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 PFKMP08237 780 aa16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 TXNP10599 105 aaKnown RBP16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 PCP11498 1178 aaKnown RBP16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 POU3F3P20264 500 aaPredicted RBP16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 ARHGAP1Q07960 439 aa16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 TCTN1Q2MV58 587 aa16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 GPATCH4Q5T3I0 446 aaKnown RBP16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 DGKHQ86XP1 1220 aa16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 SYTL5Q8TDW5 730 aaPredicted RBP16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 TAAR1Q96RJ0 339 aa16.85■□□□□ 0.29
CHMP4BP1-201ENST00000556017 MRPS5P82675 430 aaKnown RBP16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 TFF2Q03403 129 aa16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 PTPN11Q06124 597 aaPredicted RBP16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 FAM47CQ5HY64 1035 aa16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 KRT40Q6A162 431 aa16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 ADGRF4Q8IZF3 695 aa16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 ADAMTS19Q8TE59 1207 aa16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 AFG1LQ8WV93 481 aa16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 DHX38Q92620 1227 aaKnown RBP16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 IL25Q9H293 177 aa16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 OSBPL3Q9H4L5 887 aa16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 PNMA2Q9UL42 364 aa16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 MTCH2Q9Y6C9 303 aa16.84■□□□□ 0.29
CHMP4BP1-201ENST00000556017 KPNA6O60684 536 aa16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 KDM4AO75164 1064 aa16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 IGHDP01880 384 aa16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 MMP3P08254 477 aa16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 BMP1P13497 986 aa16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 RFC2P35250 354 aa16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 TAP1Q03518 808 aa16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 CDC37Q16543 378 aaPredicted RBP16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 LY6KQ17RY6 165 aa16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 GDF6Q6KF10 455 aaPredicted RBP16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 SESTD1Q86VW0 696 aa16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 ENAHQ8N8S7 591 aaPredicted RBP16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 PNMA1Q8ND90 353 aa16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 ESR2Q92731 530 aa16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 NECAB3Q96P71 396 aaPredicted RBP16.83■□□□□ 0.28
CHMP4BP1-201ENST00000556017 TRIM6-TRIM34B2RNG4 842 aa16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 B4E1Z4 1266 aa16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 LPXNO60711 386 aa16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 RBL2Q08999 1139 aa16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 SLC35G1Q2M3R5 365 aa16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 QRICH1Q2TAL8 776 aa16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 TMEM67Q5HYA8 995 aa16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 RILPL2Q969X0 211 aa16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 MAF1Q9H063 256 aa16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 JMJD4Q9H9V9 463 aa16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 CERS4Q9HA82 394 aa16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 GPHNQ9NQX3 736 aaPredicted RBP16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 RAPGEFL1Q9UHV5 662 aa16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 BAZ2BQ9UIF8 2168 aaKnown RBP16.82■□□□□ 0.28
CHMP4BP1-201ENST00000556017 ABCB11O95342 1321 aa16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 RGS20O76081 388 aa16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 GHRHRQ02643 423 aa16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 HIC1Q14526 733 aa16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 TRAF7Q6Q0C0 670 aa16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 HERC6Q8IVU3 1022 aa16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 STAG2Q8N3U4 1231 aa16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 PHOSPHO2Q8TCD6 241 aa16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 WNT8BQ93098 351 aa16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 SLC9A7Q96T83 725 aa16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 UHRF1Q96T88 793 aaPredicted RBP16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 RNF41Q9H4P4 317 aaPredicted RBP16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 ZSWIM5Q9P217 1185 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms