RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 CTCFP49711 727 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-215ENST00000554997 PRMT2P55345 433 aa11.66□□□□□ -0.54
SYNE2-215ENST00000554997 CAP1Q01518 475 aa11.66□□□□□ -0.54
SYNE2-215ENST00000554997 NR5A1Q13285 461 aa11.66□□□□□ -0.54
SYNE2-215ENST00000554997 PWP2Q15269 919 aaKnown RBP11.66□□□□□ -0.54
SYNE2-215ENST00000554997 KRT25Q7Z3Z0 450 aa11.66□□□□□ -0.54
SYNE2-215ENST00000554997 ZNF467Q7Z7K2 595 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-215ENST00000554997 SOCS4Q8WXH5 440 aa11.66□□□□□ -0.54
SYNE2-215ENST00000554997 PURBQ96QR8 312 aaKnown RBP11.66□□□□□ -0.54
SYNE2-215ENST00000554997 IWS1Q96ST2 819 aa11.66□□□□□ -0.54
SYNE2-215ENST00000554997 CCDC194A0A1B0GVG4 234 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 VPS37CA5D8V6 355 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-215ENST00000554997 ZSCAN22P10073 491 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-215ENST00000554997 HSPA8P11142 646 aaKnown RBP11.65□□□□□ -0.54
SYNE2-215ENST00000554997 FLT3LGP49771 235 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 USP11P51784 963 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 NUCB2P80303 420 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 IRF5Q13568 498 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 GNL2Q13823 731 aaKnown RBP11.65□□□□□ -0.54
SYNE2-215ENST00000554997 ARHGEF16Q5VV41 709 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 MCTP1Q6DN14 999 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 XRRA1Q6P2D8 792 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 MAMDC4Q6UXC1 1216 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 VSIG10LQ86VR7 867 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 NOSTRINQ8IVI9 506 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 MSL3Q8N5Y2 521 aaKnown RBP11.65□□□□□ -0.54
SYNE2-215ENST00000554997 RASGRP4Q8TDF6 673 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 MPHOSPH6Q99547 160 aaKnown RBP11.65□□□□□ -0.54
SYNE2-215ENST00000554997 ZSCAN16Q9H4T2 348 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-215ENST00000554997 EHMT1Q9H9B1 1298 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 PXMP2Q9NR77 195 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 SRRDQ9UH36 339 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 GABRQQ9UN88 632 aa11.65□□□□□ -0.54
SYNE2-215ENST00000554997 RPTORQ8N122 1335 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 ASB14A6NK59 587 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 KIF28PB7ZC32 967 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 BRD1O95696 1058 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 IGHA2P01877 340 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 NR3C2P08235 984 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 CYP3A4P08684 503 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 CYP2B6P20813 491 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 SREBF1P36956 1147 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 ALDH5A1P51649 535 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-215ENST00000554997 PRKCZQ05513 592 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 PGM5Q15124 567 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 NONOQ15233 471 aaKnown RBP eCLIP11.64□□□□□ -0.55
SYNE2-215ENST00000554997 EARS2Q5JPH6 523 aaKnown RBP11.64□□□□□ -0.55
SYNE2-215ENST00000554997 PIK3AP1Q6ZUJ8 805 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 TRMT44Q8IYL2 757 aaKnown RBP11.64□□□□□ -0.55
SYNE2-215ENST00000554997 NPLOC4Q8TAT6 608 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 MORC4Q8TE76 937 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 TBCKQ8TEA7 893 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 CRYGNQ8WXF5 182 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 MAML3Q96JK9 1138 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 FGD4Q96M96 766 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 PDCD2LQ9BRP1 358 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 ANO3Q9BYT9 981 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-215ENST00000554997 ZDHHC9Q9Y397 364 aa11.64□□□□□ -0.55
SYNE2-215ENST00000554997 COL11A1P12107 1806 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-215ENST00000554997 ASTN1O14525 1302 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 FRMPD4Q14CM0 1322 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 EDIL3O43854 480 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 EIF3JO75822 258 aaKnown RBP11.63□□□□□ -0.55
SYNE2-215ENST00000554997 EIF2AK2P19525 551 aaKnown RBP11.63□□□□□ -0.55
SYNE2-215ENST00000554997 EDNRBP24530 442 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 LBX1P52954 281 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 PKP1Q13835 747 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 STXBP2Q15833 593 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 PCNX4Q63HM2 1172 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 OLFML2BQ68BL8 750 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 OTOP1Q7RTM1 612 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 BRAPQ7Z569 592 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 PGBD1Q96JS3 809 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 APBA2Q99767 749 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 TINF2Q9BSI4 451 aa11.63□□□□□ -0.55
SYNE2-215ENST00000554997 CYP3A7-CYP3A51PA0A087WV96 503 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 STAM2O75886 525 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 CYP3A7P24462 503 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 CCND2P30279 289 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 CIITAP33076 1130 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 TRAPPC10P48553 1259 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 ARHGAP4P98171 946 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 RESTQ13127 1097 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 INF2Q27J81 1249 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 RILPL1Q5EBL4 403 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 NEK8Q86SG6 692 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 FERMT3Q86UX7 667 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 PXYLP1Q8TE99 480 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 NAP1L4Q99733 375 aaKnown RBP11.62□□□□□ -0.55
SYNE2-215ENST00000554997 FLRT1Q9NZU1 646 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 CHMP5Q9NZZ3 219 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 TRIM17Q9Y577 477 aa11.62□□□□□ -0.55
SYNE2-215ENST00000554997 SYNGAP1Q96PV0 1343 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 CASP8AP2Q9UKL3 1982 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 SMCHD1A6NHR9 2005 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 FAM205CA6NFA0 338 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 MEIS1O00470 390 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 MAFGO15525 162 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 ADCY3O60266 1144 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms