RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 STXBP2Q15833 593 aa15.29■□□□□ 0.04
APEX1-208ENST00000554813 DUSP28Q4G0W2 176 aa15.29■□□□□ 0.04
APEX1-208ENST00000554813 RUFY3Q7L099 469 aa15.29■□□□□ 0.04
APEX1-208ENST00000554813 BRF1Q92994 677 aa15.29■□□□□ 0.04
APEX1-208ENST00000554813 WDR11Q9BZH6 1224 aa15.29■□□□□ 0.04
APEX1-208ENST00000554813 ZSWIM6Q9HCJ5 1215 aa15.29■□□□□ 0.04
APEX1-208ENST00000554813 PXMP2Q9NR77 195 aa15.29■□□□□ 0.04
APEX1-208ENST00000554813 COL20A1Q9P218 1284 aa15.29■□□□□ 0.04
APEX1-208ENST00000554813 GNEQ9Y223 722 aaKnown RBP15.29■□□□□ 0.04
APEX1-208ENST00000554813 CYP46A1Q9Y6A2 500 aa15.29■□□□□ 0.04
APEX1-208ENST00000554813 BAZ2BQ9UIF8 2168 aaKnown RBP15.29■□□□□ 0.04
APEX1-208ENST00000554813 GOLGA8AA7E2F4 631 aa15.28■□□□□ 0.04
APEX1-208ENST00000554813 GOLGA8BA8MQT2 603 aa15.28■□□□□ 0.04
APEX1-208ENST00000554813 ZEB2O60315 1214 aa15.28■□□□□ 0.04
APEX1-208ENST00000554813 EIF3JO75822 258 aaKnown RBP15.28■□□□□ 0.04
APEX1-208ENST00000554813 HOXA13P31271 388 aaPredicted RBP15.28■□□□□ 0.04
APEX1-208ENST00000554813 NKX3-2P78367 333 aa15.28■□□□□ 0.04
APEX1-208ENST00000554813 APOBRQ0VD83 1088 aa15.28■□□□□ 0.04
APEX1-208ENST00000554813 CCSAPQ6IQ19 270 aaPredicted RBP15.28■□□□□ 0.04
APEX1-208ENST00000554813 TLK2Q86UE8 772 aa15.28■□□□□ 0.04
APEX1-208ENST00000554813 SCFD2Q8WU76 684 aa15.28■□□□□ 0.04
APEX1-208ENST00000554813 CUL5Q93034 780 aa15.28■□□□□ 0.04
APEX1-208ENST00000554813 TM6SF1Q9BZW5 370 aa15.28■□□□□ 0.04
APEX1-208ENST00000554813 DNAH12Q6ZR08 3092 aa15.28■□□□□ 0.04
APEX1-208ENST00000554813 LCTP09848 1927 aa15.27■□□□□ 0.04
APEX1-208ENST00000554813 A0A1W2PQ45 241 aaPredicted RBP15.27■□□□□ 0.04
APEX1-208ENST00000554813 A0A1W2PQY0 241 aa15.27■□□□□ 0.04
APEX1-208ENST00000554813 NKRFO15226 690 aaKnown RBP eCLIP15.27■□□□□ 0.04
APEX1-208ENST00000554813 NR3C2P08235 984 aa15.27■□□□□ 0.04
APEX1-208ENST00000554813 EIF2AK2P19525 551 aaKnown RBP15.27■□□□□ 0.04
APEX1-208ENST00000554813 METAP2P50579 478 aaKnown RBP eCLIP15.27■□□□□ 0.04
APEX1-208ENST00000554813 TTLL4Q14679 1199 aa15.27■□□□□ 0.04
APEX1-208ENST00000554813 FSCN1Q16658 493 aaKnown RBP15.27■□□□□ 0.04
APEX1-208ENST00000554813 C1orf53Q5VUE5 145 aa15.27■□□□□ 0.04
APEX1-208ENST00000554813 FCHSD1Q86WN1 690 aa15.27■□□□□ 0.04
APEX1-208ENST00000554813 VTI1AQ96AJ9 217 aa15.27■□□□□ 0.04
APEX1-208ENST00000554813 GLT1D1Q96MS3 346 aa15.27■□□□□ 0.04
APEX1-208ENST00000554813 AGXT2Q9BYV1 514 aa15.27■□□□□ 0.04
APEX1-208ENST00000554813 MYADML2A6NDP7 307 aa15.26■□□□□ 0.03
APEX1-208ENST00000554813 ASGR1P07306 291 aa15.26■□□□□ 0.03
APEX1-208ENST00000554813 TXNP10599 105 aaKnown RBP15.26■□□□□ 0.03
APEX1-208ENST00000554813 RTP1P59025 263 aa15.26■□□□□ 0.03
APEX1-208ENST00000554813 SNX17Q15036 470 aa15.26■□□□□ 0.03
APEX1-208ENST00000554813 BRDTQ58F21 947 aaPredicted RBP15.26■□□□□ 0.03
APEX1-208ENST00000554813 SEPT14Q6ZU15 432 aa15.26■□□□□ 0.03
APEX1-208ENST00000554813 SMARCC2Q8TAQ2 1214 aa15.26■□□□□ 0.03
APEX1-208ENST00000554813 PSTPIP2Q9H939 334 aa15.26■□□□□ 0.03
APEX1-208ENST00000554813 STARD7Q9NQZ5 370 aa15.26■□□□□ 0.03
APEX1-208ENST00000554813 ATP11BQ9Y2G3 1177 aa15.26■□□□□ 0.03
APEX1-208ENST00000554813 V9GY48 417 aaPredicted RBP15.26■□□□□ 0.03
APEX1-208ENST00000554813 ELP1O95163 1332 aa15.25■□□□□ 0.03
APEX1-208ENST00000554813 hCG_1642624A0A1W2PR95 340 aa15.25■□□□□ 0.03
APEX1-208ENST00000554813 PIK3CDO00329 1044 aa15.25■□□□□ 0.03
APEX1-208ENST00000554813 CTAGE5O15320 804 aa15.25■□□□□ 0.03
APEX1-208ENST00000554813 CABYRO75952 493 aa15.25■□□□□ 0.03
APEX1-208ENST00000554813 MYCLP12524 364 aaPredicted RBP15.25■□□□□ 0.03
APEX1-208ENST00000554813 ADD1P35611 737 aaKnown RBP15.25■□□□□ 0.03
APEX1-208ENST00000554813 ANAPC15P60006 121 aa15.25■□□□□ 0.03
APEX1-208ENST00000554813 IRX5P78411 483 aaPredicted RBP15.25■□□□□ 0.03
APEX1-208ENST00000554813 BEX3Q00994 111 aa15.25■□□□□ 0.03
APEX1-208ENST00000554813 TMEM63BQ5T3F8 832 aa15.25■□□□□ 0.03
APEX1-208ENST00000554813 HEATR3Q7Z4Q2 680 aa15.25■□□□□ 0.03
APEX1-208ENST00000554813 VSIG10LQ86VR7 867 aa15.25■□□□□ 0.03
APEX1-208ENST00000554813 PDCD2LQ9BRP1 358 aa15.25■□□□□ 0.03
APEX1-208ENST00000554813 FAM217BQ9NTX9 383 aaPredicted RBP15.25■□□□□ 0.03
APEX1-208ENST00000554813 PRKAG2Q9UGJ0 569 aa15.25■□□□□ 0.03
APEX1-208ENST00000554813 ZMYND8Q9ULU4 1186 aaPredicted RBP15.25■□□□□ 0.03
APEX1-208ENST00000554813 SYN1P17600 705 aa15.24■□□□□ 0.03
APEX1-208ENST00000554813 CDC27P30260 824 aa15.24■□□□□ 0.03
APEX1-208ENST00000554813 CCND2P30279 289 aa15.24■□□□□ 0.03
APEX1-208ENST00000554813 CPT1AP50416 773 aa15.24■□□□□ 0.03
APEX1-208ENST00000554813 EVCP57679 992 aa15.24■□□□□ 0.03
APEX1-208ENST00000554813 FUT2Q10981 343 aa15.24■□□□□ 0.03
APEX1-208ENST00000554813 PGM5Q15124 567 aa15.24■□□□□ 0.03
APEX1-208ENST00000554813 TRIM60Q495X7 471 aa15.24■□□□□ 0.03
APEX1-208ENST00000554813 KCNV1Q6PIU1 500 aa15.24■□□□□ 0.03
APEX1-208ENST00000554813 OR6J1Q8NGC5 347 aa15.24■□□□□ 0.03
APEX1-208ENST00000554813 UPF3BQ9BZI7 483 aaKnown RBP15.24■□□□□ 0.03
APEX1-208ENST00000554813 PDRG1Q9NUG6 133 aa15.24■□□□□ 0.03
APEX1-208ENST00000554813 CNTNAP5Q8WYK1 1306 aa15.23■□□□□ 0.03
APEX1-208ENST00000554813 hCG_1984214I3L0E3 225 aa15.23■□□□□ 0.03
APEX1-208ENST00000554813 MEIS2O14770 477 aa15.23■□□□□ 0.03
APEX1-208ENST00000554813 PDIA3P30101 505 aaKnown RBP15.23■□□□□ 0.03
APEX1-208ENST00000554813 TLE2Q04725 743 aa15.23■□□□□ 0.03
APEX1-208ENST00000554813 CCDC62Q6P9F0 684 aa15.23■□□□□ 0.03
APEX1-208ENST00000554813 USP17L6PQ6QN14 398 aa15.23■□□□□ 0.03
APEX1-208ENST00000554813 CHRDL2Q6WN34 429 aa15.23■□□□□ 0.03
APEX1-208ENST00000554813 TEX2Q8IWB9 1127 aa15.23■□□□□ 0.03
APEX1-208ENST00000554813 ZNF713Q8N859 430 aaPredicted RBP15.23■□□□□ 0.03
APEX1-208ENST00000554813 RBM27Q9P2N5 1060 aaKnown RBP15.23■□□□□ 0.03
APEX1-208ENST00000554813 COLQQ9Y215 455 aaPredicted RBP15.23■□□□□ 0.03
APEX1-208ENST00000554813 ALPK3Q96L96 1907 aa15.23■□□□□ 0.03
APEX1-208ENST00000554813 A0A0U1RQG5 324 aaPredicted RBP15.22■□□□□ 0.03
APEX1-208ENST00000554813 DCDC2CA8MYV0 355 aa15.22■□□□□ 0.03
APEX1-208ENST00000554813 KPNA6O60684 536 aa15.22■□□□□ 0.03
APEX1-208ENST00000554813 STAM2O75886 525 aa15.22■□□□□ 0.03
APEX1-208ENST00000554813 GH1P01241 217 aa15.22■□□□□ 0.03
APEX1-208ENST00000554813 PTGS1P23219 599 aa15.22■□□□□ 0.03
APEX1-208ENST00000554813 NAPAP54920 295 aa15.22■□□□□ 0.03
APEX1-208ENST00000554813 AKAP17AQ02040 695 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms