RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 TMEM63BQ5T3F8 832 aa14.89□□□□□ -0.03
MTHFD1-208ENST00000554739 GJC2Q5T442 439 aaPredicted RBP14.89□□□□□ -0.03
MTHFD1-208ENST00000554739 ARHGEF16Q5VV41 709 aa14.89□□□□□ -0.03
MTHFD1-208ENST00000554739 WWC2Q6AWC2 1192 aa14.89□□□□□ -0.03
MTHFD1-208ENST00000554739 TYW1BQ6NUM6 668 aa14.89□□□□□ -0.03
MTHFD1-208ENST00000554739 USP17L6PQ6QN14 398 aa14.89□□□□□ -0.03
MTHFD1-208ENST00000554739 GPKOWQ92917 476 aaPredicted RBP eCLIP14.89□□□□□ -0.03
MTHFD1-208ENST00000554739 C11orf49Q9H6J7 331 aa14.89□□□□□ -0.03
MTHFD1-208ENST00000554739 PSTPIP2Q9H939 334 aa14.89□□□□□ -0.03
MTHFD1-208ENST00000554739 PLXNA1Q9UIW2 1896 aa14.89□□□□□ -0.03
MTHFD1-208ENST00000554739 PRPF3O43395 683 aaKnown RBP14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 NR3C2P08235 984 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 SMPD1P17405 629 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 EIF2AK2P19525 551 aaKnown RBP14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 NEK4P51957 841 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 AK2P54819 239 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 ANKRD1Q15327 319 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 STXBP2Q15833 593 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 PFKFB3Q16875 520 aaPredicted RBP14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 VSIG10LQ86VR7 867 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 FCHSD1Q86WN1 690 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 PHKBQ93100 1093 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 KIF2CQ99661 725 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 PDCD2LQ9BRP1 358 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 C22orf23Q9BZE7 217 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 TPCN1Q9ULQ1 816 aa14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 GNEQ9Y223 722 aaKnown RBP14.88□□□□□ -0.03
MTHFD1-208ENST00000554739 STXBP3O00186 592 aa14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 EIF3JO75822 258 aaKnown RBP14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 RBM25P49756 843 aaKnown RBP14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 GJA9P57773 515 aa14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 NKX3-2P78367 333 aa14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 IRX5P78411 483 aaPredicted RBP14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 STK3Q13188 491 aa14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 PKN1Q16512 942 aa14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 CCSAPQ6IQ19 270 aaPredicted RBP14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 RNF180Q86T96 592 aa14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 KLHDC9Q8NEP7 349 aa14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 WDR11Q9BZH6 1224 aa14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 UPF3AQ9H1J1 476 aaKnown RBP14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 BARHL2Q9NY43 387 aa14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 SYNRGQ9UMZ2 1314 aa14.87□□□□□ -0.03
MTHFD1-208ENST00000554739 DNAH12Q6ZR08 3092 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 hCG_1984214I3L0E3 225 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 CTAGE5O15320 804 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 PFKFB2O60825 505 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 PPFIA3O75145 1194 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 SCG2P13521 617 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 PTGS1P23219 599 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 NAPAP54920 295 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 PGM5Q15124 567 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 DUSP28Q4G0W2 176 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 PPP1R18Q6NYC8 613 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 NOL8Q76FK4 1167 aaKnown RBP14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 ZNF713Q8N859 430 aaPredicted RBP14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 SMARCC2Q8TAQ2 1214 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 CUL5Q93034 780 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 HTATIP2Q9BUP3 242 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 RNF26Q9BY78 433 aaPredicted RBP14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 SENP6Q9GZR1 1112 aaPredicted RBP14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 RBM27Q9P2N5 1060 aaKnown RBP14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 Q9Y3F1 56 aa14.86□□□□□ -0.03
MTHFD1-208ENST00000554739 MYADML2A6NDP7 307 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 KBTBD13C9JR72 458 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 DYNC1LI2O43237 492 aaPredicted RBP14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 RGS20O76081 388 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 MYCLP12524 364 aaPredicted RBP14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 SCRN1Q12765 414 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 CCDC62Q6P9F0 684 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 TEX2Q8IWB9 1127 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 IL31RAQ8NI17 732 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 SCFD2Q8WU76 684 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 TSEN34Q9BSV6 310 aaKnown RBP14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 SLC26A6Q9BXS9 759 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 RIC8AQ9NPQ8 531 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 PHF24Q9UPV7 400 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 LCTP09848 1927 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 FRMPD4Q14CM0 1322 aa14.85□□□□□ -0.03
MTHFD1-208ENST00000554739 SMCO2A6NFE2 343 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 CPLX1O14810 134 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 ARIH2O95376 493 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 C6orf222P0C671 652 aaPredicted RBP14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 TXNP10599 105 aaKnown RBP14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 CST5P28325 142 aaPredicted RBP14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 ACLYP53396 1101 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 AKAP17AQ02040 695 aaKnown RBP14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 KCNA10Q16322 511 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 UBE2SQ16763 222 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 ME3Q16798 604 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 GNASQ5JWF2 1037 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 SEPT14Q6ZU15 432 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 DPF3Q92784 378 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 FERMT2Q96AC1 680 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 AP5M1Q9H0R1 490 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 SLKQ9H2G2 1235 aaPredicted RBP14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 SPC25Q9HBM1 224 aa14.84□□□□□ -0.03
MTHFD1-208ENST00000554739 PDE4DIPQ5VU43 2346 aa14.83□□□□□ -0.03
MTHFD1-208ENST00000554739 CCND2P30279 289 aa14.83□□□□□ -0.04
MTHFD1-208ENST00000554739 MRPS9P82933 396 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms