RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 TAAR1Q96RJ0 339 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 LY9Q9HBG7 655 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 SENP2Q9HC62 589 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 POLR3EQ9NVU0 708 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 PCDHA1Q9Y5I3 950 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 DDX49Q9Y6V7 483 aaKnown RBP10.13□□□□□ -0.79
ACTN1-213ENST00000554508 SZT2Q5T011 3432 aa10.13□□□□□ -0.79
ACTN1-213ENST00000554508 CCDC69A6NI79 296 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 SOX1O00570 391 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-213ENST00000554508 KPNA6O60684 536 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 DDAH1O94760 285 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 CFBP00751 764 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 CALM1P0DP23 149 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 CALM2P0DP24 149 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 CALM3P0DP25 149 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 RAG1P15918 1043 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 KIF5BP33176 963 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 LIFRP42702 1097 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 HSD17B4P51659 736 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 PPP2R5BQ15173 497 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 TMEM63BQ5T3F8 832 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 ARHGEF16Q5VV41 709 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 CXCL17Q6UXB2 119 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 ZNF654Q8IZM8 581 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 SLC43A3Q8NBI5 491 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 OR6J1Q8NGC5 347 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 CTCFLQ8NI51 663 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-213ENST00000554508 PIGSQ96S52 555 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 RMDN3Q96TC7 470 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 LZTS2Q9BRK4 669 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 SCN10AQ9Y5Y9 1956 aa10.12□□□□□ -0.79
ACTN1-213ENST00000554508 LAMA3Q16787 3333 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 SH2B2O14492 632 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-213ENST00000554508 CYTH3O43739 400 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 PPP1R11O60927 126 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-213ENST00000554508 EIF3JO75822 258 aaKnown RBP10.11□□□□□ -0.79
ACTN1-213ENST00000554508 TIMP1P01033 207 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 TXNP10599 105 aaKnown RBP10.11□□□□□ -0.79
ACTN1-213ENST00000554508 GNAQP50148 359 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 ITGA7Q13683 1181 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 TSGA10IPQ3SY00 556 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 NFXL1Q6ZNB6 911 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 HOMER1Q86YM7 354 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 LRCH3Q96II8 777 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 SPZ1Q9BXG8 430 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 PXMP2Q9NR77 195 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 COL20A1Q9P218 1284 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 TBX21Q9UL17 535 aa10.11□□□□□ -0.79
ACTN1-213ENST00000554508 A6NJR5 290 aa10.1□□□□□ -0.79
ACTN1-213ENST00000554508 GCOM1H8Y6P7 765 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-213ENST00000554508 OPLAHO14841 1288 aa10.1□□□□□ -0.79
ACTN1-213ENST00000554508 CD4P01730 458 aa10.1□□□□□ -0.79
ACTN1-213ENST00000554508 NR3C2P08235 984 aa10.1□□□□□ -0.79
ACTN1-213ENST00000554508 POLR2MP0CAP2 368 aa10.1□□□□□ -0.79
ACTN1-213ENST00000554508 FPGSQ05932 587 aa10.1□□□□□ -0.79
ACTN1-213ENST00000554508 KRT32Q14532 448 aa10.1□□□□□ -0.79
ACTN1-213ENST00000554508 SLC35G1Q2M3R5 365 aa10.1□□□□□ -0.79
ACTN1-213ENST00000554508 MFSD5Q6N075 450 aa10.1□□□□□ -0.79
ACTN1-213ENST00000554508 CCDC62Q6P9F0 684 aa10.1□□□□□ -0.79
ACTN1-213ENST00000554508 FAM126BQ8IXS8 530 aa10.1□□□□□ -0.79
ACTN1-213ENST00000554508 RRP36Q96EU6 259 aaKnown RBP10.1□□□□□ -0.79
ACTN1-213ENST00000554508 NEK1Q96PY6 1258 aa10.1□□□□□ -0.79
ACTN1-213ENST00000554508 MTG1Q9BT17 334 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-213ENST00000554508 GPHNQ9NQX3 736 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-213ENST00000554508 TRIP12Q14669 1992 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-213ENST00000554508 GH1P01241 217 aa10.09□□□□□ -0.79
ACTN1-213ENST00000554508 MYL3P08590 195 aa10.09□□□□□ -0.79
ACTN1-213ENST00000554508 EIF2AK2P19525 551 aaKnown RBP10.09□□□□□ -0.79
ACTN1-213ENST00000554508 PTGS1P23219 599 aa10.09□□□□□ -0.79
ACTN1-213ENST00000554508 ITGB8P26012 769 aa10.09□□□□□ -0.79
ACTN1-213ENST00000554508 PURAQ00577 322 aaKnown RBP10.09□□□□□ -0.79
ACTN1-213ENST00000554508 SHHQ15465 462 aa10.09□□□□□ -0.79
ACTN1-213ENST00000554508 KCNV1Q6PIU1 500 aa10.09□□□□□ -0.79
ACTN1-213ENST00000554508 SYNE3Q6ZMZ3 975 aa10.09□□□□□ -0.79
ACTN1-213ENST00000554508 SEPT14Q6ZU15 432 aa10.09□□□□□ -0.79
ACTN1-213ENST00000554508 SGMS1Q86VZ5 419 aa10.09□□□□□ -0.79
ACTN1-213ENST00000554508 PDCD2LQ9BRP1 358 aa10.09□□□□□ -0.79
ACTN1-213ENST00000554508 SEC63Q9UGP8 760 aaKnown RBP10.09□□□□□ -0.79
ACTN1-213ENST00000554508 SLC12A7Q9Y666 1083 aa10.09□□□□□ -0.79
ACTN1-213ENST00000554508 GRIN2DO15399 1336 aa10.08□□□□□ -0.8
ACTN1-213ENST00000554508 KAT6AQ92794 2004 aa10.08□□□□□ -0.8
ACTN1-213ENST00000554508 ARIH2O95376 493 aa10.08□□□□□ -0.8
ACTN1-213ENST00000554508 HMGB1P09429 215 aaKnown RBP10.08□□□□□ -0.8
ACTN1-213ENST00000554508 SUPT20HL2P0C7V6 817 aa10.08□□□□□ -0.8
ACTN1-213ENST00000554508 TGFB3P10600 412 aa10.08□□□□□ -0.8
ACTN1-213ENST00000554508 MYCLP12524 364 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-213ENST00000554508 CCND2P30279 289 aa10.08□□□□□ -0.8
ACTN1-213ENST00000554508 HOXA13P31271 388 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-213ENST00000554508 EXOSC10Q01780 885 aaKnown RBP10.08□□□□□ -0.8
ACTN1-213ENST00000554508 PTPN11Q06124 597 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-213ENST00000554508 PPIGQ13427 754 aaKnown RBP eCLIP10.08□□□□□ -0.84e-13■■□□□ 11.4
ACTN1-213ENST00000554508 PGM5Q15124 567 aa10.08□□□□□ -0.8
ACTN1-213ENST00000554508 C9orf50Q5SZB4 431 aa10.08□□□□□ -0.8
ACTN1-213ENST00000554508 FAM109BQ6ICB4 259 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-213ENST00000554508 DHX32Q7L7V1 743 aaKnown RBP10.08□□□□□ -0.8
ACTN1-213ENST00000554508 VSIG10LQ86VR7 867 aa10.08□□□□□ -0.8
ACTN1-213ENST00000554508 TMEM199Q8N511 208 aa10.08□□□□□ -0.8
ACTN1-213ENST00000554508 SRBD1Q8N5C6 995 aaKnown RBP10.08□□□□□ -0.8
ACTN1-213ENST00000554508 FANCBQ8NB91 859 aa10.08□□□□□ -0.8
ACTN1-213ENST00000554508 COPS5Q92905 334 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms