RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PARNO95453 639 aaKnown RBP9.1□□□□□ -0.95
ABCD4-220ENST00000553998 CXCL10P02778 98 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 ALAS1P13196 640 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 SLC1A4P43007 532 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 WDR5P61964 334 aaKnown RBP9.1□□□□□ -0.95
ABCD4-220ENST00000553998 RBL2Q08999 1139 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 PPP4R3BQ5MIZ7 849 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 POTEBQ6S5H4 581 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 SESTD1Q86VW0 696 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 LRRC47Q8N1G4 583 aaKnown RBP9.1□□□□□ -0.95
ABCD4-220ENST00000553998 CAGE1Q8TC20 777 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 AFAP1L1Q8TED9 768 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 PURBQ96QR8 312 aaKnown RBP9.1□□□□□ -0.95
ABCD4-220ENST00000553998 CTAGE1Q96RT6 745 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 RAD9AQ99638 391 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 SUGCTQ9HAC7 445 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 EPB41L4AQ9HCS5 686 aaPredicted RBP9.1□□□□□ -0.95
ABCD4-220ENST00000553998 ADD3Q9UEY8 706 aaKnown RBP9.1□□□□□ -0.95
ABCD4-220ENST00000553998 PRR12Q9ULL5 1215 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 TCF20Q9UGU0 1960 aaKnown RBP9.1□□□□□ -0.95
ABCD4-220ENST00000553998 WDFY4Q6ZS81 3184 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 LCHNA4D1U4 455 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 GRXCR2A6NFK2 248 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 GPAA1O43292 621 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 GJB5O95377 273 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 ICAM1P05362 532 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 MYL3P08590 195 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 MCCP23508 829 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 EDNRBP24530 442 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 MRE11P49959 708 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 ALDH5A1P51649 535 aaPredicted RBP9.09□□□□□ -0.95
ABCD4-220ENST00000553998 MFAP1P55081 439 aaKnown RBP9.09□□□□□ -0.95
ABCD4-220ENST00000553998 BAATQ14032 418 aaPredicted RBP9.09□□□□□ -0.95
ABCD4-220ENST00000553998 PUS10Q3MIT2 529 aaKnown RBP9.09□□□□□ -0.95
ABCD4-220ENST00000553998 MCMDC2Q4G0Z9 681 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 BRDTQ58F21 947 aaPredicted RBP9.09□□□□□ -0.95
ABCD4-220ENST00000553998 BTNL9Q6UXG8 535 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 SKAP1Q86WV1 359 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 NEK9Q8TD19 979 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 RUFY2Q8WXA3 655 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 TGS1Q96RS0 853 aaKnown RBP9.09□□□□□ -0.95
ABCD4-220ENST00000553998 FTOQ9C0B1 505 aaKnown RBP eCLIP9.09□□□□□ -0.95
ABCD4-220ENST00000553998 RANBP17Q9H2T7 1088 aaKnown RBP9.09□□□□□ -0.95
ABCD4-220ENST00000553998 GPHNQ9NQX3 736 aaPredicted RBP9.09□□□□□ -0.95
ABCD4-220ENST00000553998 MCM3APO60318 1980 aa9.09□□□□□ -0.95
ABCD4-220ENST00000553998 RAD50Q92878 1312 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 ABHD14A-ACY1A0A1B0GW23 586 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 TSPY3P0CV98 308 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 TSPY8P0CW00 308 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 CHMLP26374 656 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 KCNJ6P48051 423 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 TFAP4Q01664 338 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 NHLH1Q02575 133 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 PDE4BQ07343 736 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 NMIQ13287 307 aaPredicted RBP9.08□□□□□ -0.96
ABCD4-220ENST00000553998 COL19A1Q14993 1142 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 CNKSR3Q6P9H4 555 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 CASC1Q6TDU7 716 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 NSMFQ6X4W1 530 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 IFNL3Q8IZI9 196 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 STK11IPQ8N1F8 1099 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 OR6J1Q8NGC5 347 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 FAM227BQ96M60 508 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 NACAP1Q9BZK3 213 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 IL17RBQ9NRM6 502 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 LRRC37A2A6NM11 1700 aa9.08□□□□□ -0.96
ABCD4-220ENST00000553998 USP34Q70CQ2 3546 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 GBF1Q92538 1859 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 A0A0D9SFI3 127 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 LINC01553A4QN01 128 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 C19orf67A6NJJ6 358 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 M0R2C6 588 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 EFCAB14O75071 495 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 CDC45O75419 566 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 IL9P15248 144 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 SELPP16109 830 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 TDO2P48775 406 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 DEFB103AP81534 67 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 MKRN4PQ13434 485 aaPredicted RBP9.07□□□□□ -0.96
ABCD4-220ENST00000553998 PTGISQ16647 500 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 FAM47CQ5HY64 1035 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 KCTD1Q719H9 257 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 CCDC155Q8N6L0 562 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 RGS22Q8NE09 1264 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 DNERQ8NFT8 737 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 GDPD5Q8WTR4 605 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 SCFD2Q8WU76 684 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 CLEC4DQ8WXI8 215 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 DHX38Q92620 1227 aaKnown RBP9.07□□□□□ -0.96
ABCD4-220ENST00000553998 FBXL18Q96ME1 805 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 MAF1Q9H063 256 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 CCPG1Q9ULG6 757 aa9.07□□□□□ -0.96
ABCD4-220ENST00000553998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.07□□□□□ -0.96
ABCD4-220ENST00000553998 CCDC171Q6TFL3 1326 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 NFIBO00712 420 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 DCXO43602 365 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 NBNO60934 754 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 KCNA5P22460 613 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 SNAP25P60880 206 aa9.06□□□□□ -0.96
ABCD4-220ENST00000553998 HTRA4P83105 476 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms