RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 FBXO40Q9UH90 709 aa13.37□□□□□ -0.27
NEK9-202ENST00000553823 PCDHA7Q9UN72 937 aa13.37□□□□□ -0.27
NEK9-202ENST00000553823 DDX49Q9Y6V7 483 aaKnown RBP13.37□□□□□ -0.27
NEK9-202ENST00000553823 TRAK2O60296 914 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 CUTAO60888 179 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 MBD3O95983 291 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 GCFC2P16383 781 aaKnown RBP13.36□□□□□ -0.27
NEK9-202ENST00000553823 ERVK-9P63128 1117 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 ERVK-24P63145 666 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 SREBF2Q12772 1141 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 TPRNQ4KMQ1 711 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 ADALQ6DHV7 355 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 PPP4R3AQ6IN85 833 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 MOXD1Q6UVY6 613 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
NEK9-202ENST00000553823 NCAPG2Q86XI2 1143 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 C4orf32Q8N8J7 132 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 KRI1Q8N9T8 703 aaKnown RBP13.36□□□□□ -0.27
NEK9-202ENST00000553823 CRYGNQ8WXF5 182 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 A1CFQ9NQ94 594 aaKnown RBP13.36□□□□□ -0.27
NEK9-202ENST00000553823 COL20A1Q9P218 1284 aa13.36□□□□□ -0.27
NEK9-202ENST00000553823 IGF2BP3O00425 579 aaKnown RBP eCLIP13.35□□□□□ -0.27
NEK9-202ENST00000553823 LAD1O00515 517 aa13.35□□□□□ -0.27
NEK9-202ENST00000553823 NEMFO60524 1076 aa13.35□□□□□ -0.27
NEK9-202ENST00000553823 TDP2O95551 362 aa13.35□□□□□ -0.27
NEK9-202ENST00000553823 CYP3A4P08684 503 aa13.35□□□□□ -0.27
NEK9-202ENST00000553823 PTPREP23469 700 aa13.35□□□□□ -0.27
NEK9-202ENST00000553823 APLP1P51693 650 aa13.35□□□□□ -0.27
NEK9-202ENST00000553823 BAATQ14032 418 aaPredicted RBP13.35□□□□□ -0.27
NEK9-202ENST00000553823 Q3C1V9 767 aa13.35□□□□□ -0.27
NEK9-202ENST00000553823 AXDND1Q5T1B0 1012 aaPredicted RBP13.35□□□□□ -0.27
NEK9-202ENST00000553823 ARL6IP4Q66PJ3 421 aaKnown RBP13.35□□□□□ -0.27
NEK9-202ENST00000553823 SLC30A10Q6XR72 485 aa13.35□□□□□ -0.27
NEK9-202ENST00000553823 GPRC5AQ8NFJ5 357 aa13.35□□□□□ -0.27
NEK9-202ENST00000553823 GPT2Q8TD30 523 aa13.35□□□□□ -0.27
NEK9-202ENST00000553823 FERMT2Q96AC1 680 aa13.35□□□□□ -0.27
NEK9-202ENST00000553823 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
NEK9-202ENST00000553823 FBXO2Q9UK22 296 aaPredicted RBP13.35□□□□□ -0.27
NEK9-202ENST00000553823 SRPRBQ9Y5M8 271 aaKnown RBP13.35□□□□□ -0.27
NEK9-202ENST00000553823 CYP3A7-CYP3A51PA0A087WV96 503 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 A0A1W2PQ27 194 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 A0A1W2PQ64 194 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 A0A1W2PQD8 194 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 PITPNM1O00562 1244 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 ERCC3P19447 782 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 CYP3A7P24462 503 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 CIITAP33076 1130 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 CCNA1P78396 465 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
NEK9-202ENST00000553823 KLHL40Q2TBA0 621 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 CYP4F22Q6NT55 531 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.34□□□□□ -0.27
NEK9-202ENST00000553823 IFNL1Q8IU54 200 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 ANKRD13CQ8N6S4 541 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 SHCBP1Q8NEM2 672 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 MBOAT7Q96N66 472 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 TAAR1Q96RJ0 339 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 TMEM60Q9H2L4 133 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 MROH8Q9H579 483 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 CYP39A1Q9NYL5 469 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 MORF4L1Q9UBU8 362 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 DDX25Q9UHL0 483 aaKnown RBP13.34□□□□□ -0.27
NEK9-202ENST00000553823 MRVI1Q9Y6F6 885 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 LCTP09848 1927 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 PFASO15067 1338 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 FRMPD4Q14CM0 1322 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 RPTORQ8N122 1335 aa13.34□□□□□ -0.27
NEK9-202ENST00000553823 RASSF10A6NK89 507 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 OR52Z1P0C646 297 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 CMA1P23946 247 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 ZNF76P36508 570 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 PRPHP41219 470 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 TM4SF4P48230 202 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 NOGQ13253 232 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 GRM1Q13255 1194 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 TAF1CQ15572 869 aaPredicted RBP13.33□□□□□ -0.28
NEK9-202ENST00000553823 CALCRLQ16602 461 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 DEFB115Q30KQ5 88 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 CCAR1Q8IX12 1150 aaKnown RBP13.33□□□□□ -0.28
NEK9-202ENST00000553823 ANKRD35Q8N283 1001 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.28
NEK9-202ENST00000553823 SP7Q8TDD2 431 aaPredicted RBP13.33□□□□□ -0.28
NEK9-202ENST00000553823 CLIC6Q96NY7 704 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 RMDN3Q96TC7 470 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 PXMP2Q9NR77 195 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 DOCK3Q8IZD9 2030 aa13.33□□□□□ -0.28
NEK9-202ENST00000553823 VWA3AA6NCI4 1184 aa13.32□□□□□ -0.28
NEK9-202ENST00000553823 SLC37A4O43826 429 aa13.32□□□□□ -0.28
NEK9-202ENST00000553823 UBXN2AP68543 259 aa13.32□□□□□ -0.28
NEK9-202ENST00000553823 GRIN1Q05586 938 aa13.32□□□□□ -0.28
NEK9-202ENST00000553823 FAM110CQ1W6H9 321 aa13.32□□□□□ -0.28
NEK9-202ENST00000553823 Q4G0T1 1027 aa13.32□□□□□ -0.28
NEK9-202ENST00000553823 PRR16Q569H4 304 aa13.32□□□□□ -0.28
NEK9-202ENST00000553823 ARHGEF16Q5VV41 709 aa13.32□□□□□ -0.28
NEK9-202ENST00000553823 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
NEK9-202ENST00000553823 CCDC73Q6ZRK6 1079 aa13.32□□□□□ -0.28
NEK9-202ENST00000553823 FSIP1Q8NA03 581 aa13.32□□□□□ -0.28
NEK9-202ENST00000553823 NSUN6Q8TEA1 469 aaKnown RBP13.32□□□□□ -0.28
NEK9-202ENST00000553823 MRPS27Q92552 414 aaKnown RBP13.32□□□□□ -0.28
NEK9-202ENST00000553823 CAPNS2Q96L46 248 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms