RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 OTOP2Q7RTS6 562 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 RETREG2Q8NC44 543 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 OTUD7AQ8TE49 926 aaPredicted RBP10.21□□□□□ -0.78
TMEM116-217ENST00000552801 RILPL2Q969X0 211 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 FGD4Q96M96 766 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 PBX4Q9BYU1 374 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 WDR11Q9BZH6 1224 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 PRDM12Q9H4Q4 367 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 GNEQ9Y223 722 aaKnown RBP10.21□□□□□ -0.78
TMEM116-217ENST00000552801 PCDHB15Q9Y5E8 787 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 ZNF536O15090 1300 aa10.21□□□□□ -0.78
TMEM116-217ENST00000552801 LOC102724159A0A0B4J2E5 919 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 GRXCR1A8MXD5 290 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 ORC4O43929 436 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 DHX16O60231 1041 aaKnown RBP10.2□□□□□ -0.78
TMEM116-217ENST00000552801 KPNA6O60684 536 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 PBX2P40425 430 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 ALDH5A1P51649 535 aaPredicted RBP10.2□□□□□ -0.78
TMEM116-217ENST00000552801 PSMC6P62333 389 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 IRX6P78412 446 aaPredicted RBP10.2□□□□□ -0.78
TMEM116-217ENST00000552801 PWP2Q15269 919 aaKnown RBP10.2□□□□□ -0.78
TMEM116-217ENST00000552801 SKIV2LQ15477 1246 aaKnown RBP10.2□□□□□ -0.78
TMEM116-217ENST00000552801 DUSP28Q4G0W2 176 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 PPP2R2DQ66LE6 453 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 MICALL1Q8N3F8 863 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 HERVK_113Q902F9 699 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 MTG1Q9BT17 334 aaPredicted RBP10.2□□□□□ -0.78
TMEM116-217ENST00000552801 KATNBL1Q9H079 304 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 TRPV6Q9H1D0 765 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 RANBP17Q9H2T7 1088 aaKnown RBP10.2□□□□□ -0.78
TMEM116-217ENST00000552801 INCENPQ9NQS7 918 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 PDGFCQ9NRA1 345 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 IL17RBQ9NRM6 502 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 ANAPC4Q9UJX5 808 aa10.2□□□□□ -0.78
TMEM116-217ENST00000552801 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.2□□□□□ -0.78
TMEM116-217ENST00000552801 DPYSL4O14531 572 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 NKRFO15226 690 aaKnown RBP eCLIP10.19□□□□□ -0.78
TMEM116-217ENST00000552801 B4GALT4O60513 344 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 CD4P01730 458 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 PFKMP08237 780 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 PCP11498 1178 aaKnown RBP10.19□□□□□ -0.78
TMEM116-217ENST00000552801 HAND2P61296 217 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 NKX3-2P78367 333 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 ALX1Q15699 326 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 CCDC85BQ15834 202 aaPredicted RBP10.19□□□□□ -0.78
TMEM116-217ENST00000552801 CCDC178Q5BJE1 867 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 TTBK2Q6IQ55 1244 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 IQCA1Q86XH1 822 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 CCDC155Q8N6L0 562 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 SCFD2Q8WU76 684 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 ESR2Q92731 530 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 HS3ST6Q96QI5 342 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 TMEM47Q9BQJ4 181 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 FTOQ9C0B1 505 aaKnown RBP eCLIP10.19□□□□□ -0.78
TMEM116-217ENST00000552801 NKX2-4Q9H2Z4 354 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 THEGQ9P2T0 379 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 LHX6Q9UPM6 363 aa10.19□□□□□ -0.78
TMEM116-217ENST00000552801 KIF28PB7ZC32 967 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 NFIBO00712 420 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 ZNF213O14771 459 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 FGAP02671 866 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 ATP2A2P16615 1042 aaKnown RBP10.18□□□□□ -0.78
TMEM116-217ENST00000552801 PDE1AP54750 535 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 RRP1P56182 461 aaKnown RBP10.18□□□□□ -0.78
TMEM116-217ENST00000552801 BFSP2Q13515 415 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 TTLL4Q14679 1199 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 USH1GQ495M9 461 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 VARS2Q5ST30 1063 aaKnown RBP10.18□□□□□ -0.78
TMEM116-217ENST00000552801 AKNAD1Q5T1N1 836 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 GPATCH4Q5T3I0 446 aaKnown RBP10.18□□□□□ -0.78
TMEM116-217ENST00000552801 VPS53Q5VIR6 699 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 TAPT1Q6NXT6 567 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 DEFB128Q7Z7B8 93 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 TICAM2Q86XR7 235 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 SLC43A3Q8NBI5 491 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 TTC14Q96N46 770 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 NOC4LQ9BVI4 516 aaKnown RBP10.18□□□□□ -0.78
TMEM116-217ENST00000552801 ALDH8A1Q9H2A2 487 aaPredicted RBP10.18□□□□□ -0.78
TMEM116-217ENST00000552801 KAT14Q9H8E8 782 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 DIAPH3Q9NSV4 1193 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 TCP11L1Q9NUJ3 509 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 MYO9BQ13459 2157 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 ASTN1O14525 1302 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 TNKSO95271 1327 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 CCDC171Q6TFL3 1326 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 LRRC37A2A6NM11 1700 aa10.18□□□□□ -0.78
TMEM116-217ENST00000552801 TNFRSF10AO00220 468 aa10.17□□□□□ -0.78
TMEM116-217ENST00000552801 CTAGE5O15320 804 aa10.17□□□□□ -0.78
TMEM116-217ENST00000552801 TXNP10599 105 aaKnown RBP10.17□□□□□ -0.78
TMEM116-217ENST00000552801 HSPD1P10809 573 aaKnown RBP10.17□□□□□ -0.78
TMEM116-217ENST00000552801 PDHBP11177 359 aa10.17□□□□□ -0.78
TMEM116-217ENST00000552801 RFC2P35250 354 aa10.17□□□□□ -0.78
TMEM116-217ENST00000552801 KCNJ6P48051 423 aa10.17□□□□□ -0.78
TMEM116-217ENST00000552801 MRPS5P82675 430 aaKnown RBP10.17□□□□□ -0.78
TMEM116-217ENST00000552801 TMEM67Q5HYA8 995 aa10.17□□□□□ -0.78
TMEM116-217ENST00000552801 BTNL9Q6UXG8 535 aa10.17□□□□□ -0.78
TMEM116-217ENST00000552801 C16orf59Q7L2K0 433 aa10.17□□□□□ -0.78
TMEM116-217ENST00000552801 RASGRP2Q7LDG7 609 aa10.17□□□□□ -0.78
TMEM116-217ENST00000552801 DNERQ8NFT8 737 aa10.17□□□□□ -0.78
TMEM116-217ENST00000552801 ATXN2LQ8WWM7 1075 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms