RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 GSG1L2A8MUP6 293 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 NBNO60934 754 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 ATP5JP18859 108 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 IRS1P35568 1242 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 PTPN5P54829 565 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 TCTN1Q2MV58 587 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 HERC4Q5GLZ8 1057 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-222ENST00000551425 SESTD1Q86VW0 696 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 PRSS33Q8NF86 280 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 KIF1BPQ96EK5 621 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 STRBPQ96SI9 672 aaKnown RBP14.2□□□□□ -0.14
PTCH1-222ENST00000551425 CRBNQ96SW2 442 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 C17orf80Q9BSJ5 609 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 INSL6Q9Y581 213 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 PLIN4Q96Q06 1357 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 SIP14410 1827 aa14.2□□□□□ -0.14
PTCH1-222ENST00000551425 USP34Q70CQ2 3546 aa14.19□□□□□ -0.14
PTCH1-222ENST00000551425 MINDY4BA8MYZ0 360 aa14.19□□□□□ -0.14
PTCH1-222ENST00000551425 SLC1A4P43007 532 aa14.19□□□□□ -0.14
PTCH1-222ENST00000551425 IKQ13123 557 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-222ENST00000551425 IKBKEQ14164 716 aa14.19□□□□□ -0.14
PTCH1-222ENST00000551425 PPP2R5BQ15173 497 aa14.19□□□□□ -0.14
PTCH1-222ENST00000551425 ZSCAN25Q6NSZ9 544 aa14.19□□□□□ -0.14
PTCH1-222ENST00000551425 BMP8AQ7Z5Y6 402 aa14.19□□□□□ -0.14
PTCH1-222ENST00000551425 ITPRIPQ8IWB1 547 aa14.19□□□□□ -0.14
PTCH1-222ENST00000551425 BANK1Q8NDB2 785 aa14.19□□□□□ -0.14
PTCH1-222ENST00000551425 NEDD1Q8NHV4 660 aa14.19□□□□□ -0.14
PTCH1-222ENST00000551425 DHX38Q92620 1227 aaKnown RBP14.19□□□□□ -0.14
PTCH1-222ENST00000551425 PRRX2Q99811 253 aa14.19□□□□□ -0.14
PTCH1-222ENST00000551425 ISY1Q9ULR0 285 aaKnown RBP14.19□□□□□ -0.14
PTCH1-222ENST00000551425 MYH4Q9Y623 1939 aa14.18□□□□□ -0.14
PTCH1-222ENST00000551425 CFAP54Q96N23 3096 aa14.18□□□□□ -0.14
PTCH1-222ENST00000551425 PRDM1O75626 825 aa14.18□□□□□ -0.14
PTCH1-222ENST00000551425 ICAM1P05362 532 aa14.18□□□□□ -0.14
PTCH1-222ENST00000551425 HTRA4P83105 476 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-222ENST00000551425 BAATQ14032 418 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-222ENST00000551425 PKN1Q16512 942 aa14.18□□□□□ -0.14
PTCH1-222ENST00000551425 GDF6Q6KF10 455 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-222ENST00000551425 SP7Q8TDD2 431 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-222ENST00000551425 SCFD2Q8WU76 684 aa14.18□□□□□ -0.14
PTCH1-222ENST00000551425 SAMD11Q96NU1 681 aa14.18□□□□□ -0.14
PTCH1-222ENST00000551425 POP1Q99575 1024 aaKnown RBP14.18□□□□□ -0.14
PTCH1-222ENST00000551425 CCPG1Q9ULG6 757 aa14.18□□□□□ -0.14
PTCH1-222ENST00000551425 PRR12Q9ULL5 1215 aa14.18□□□□□ -0.14
PTCH1-222ENST00000551425 LCTP09848 1927 aa14.17□□□□□ -0.14
PTCH1-222ENST00000551425 CKBP12277 381 aa14.17□□□□□ -0.14
PTCH1-222ENST00000551425 MCCP23508 829 aa14.17□□□□□ -0.14
PTCH1-222ENST00000551425 SNAP25P60880 206 aa14.17□□□□□ -0.14
PTCH1-222ENST00000551425 EPC2Q52LR7 807 aa14.17□□□□□ -0.14
PTCH1-222ENST00000551425 TCEAL5Q5H9L2 206 aa14.17□□□□□ -0.14
PTCH1-222ENST00000551425 RCSD1Q6JBY9 416 aa14.17□□□□□ -0.14
PTCH1-222ENST00000551425 FAM117BQ6P1L5 589 aa14.17□□□□□ -0.14
PTCH1-222ENST00000551425 FTSJ3Q8IY81 847 aaKnown RBP14.17□□□□□ -0.14
PTCH1-222ENST00000551425 EDAQ92838 391 aa14.17□□□□□ -0.14
PTCH1-222ENST00000551425 MUTYHQ9UIF7 546 aa14.17□□□□□ -0.14
PTCH1-222ENST00000551425 H3BNC9 293 aa14.16□□□□□ -0.14
PTCH1-222ENST00000551425 NCK2O43639 380 aa14.16□□□□□ -0.14
PTCH1-222ENST00000551425 TSPY3P0CV98 308 aa14.16□□□□□ -0.14
PTCH1-222ENST00000551425 TSPY8P0CW00 308 aa14.16□□□□□ -0.14
PTCH1-222ENST00000551425 RLBP1P12271 317 aa14.16□□□□□ -0.14
PTCH1-222ENST00000551425 EDNRBP24530 442 aa14.16□□□□□ -0.14
PTCH1-222ENST00000551425 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-222ENST00000551425 SMAD2Q15796 467 aaKnown RBP14.16□□□□□ -0.14
PTCH1-222ENST00000551425 IER5LQ5T953 404 aa14.16□□□□□ -0.14
PTCH1-222ENST00000551425 KCTD1Q719H9 257 aa14.16□□□□□ -0.14
PTCH1-222ENST00000551425 COPS5Q92905 334 aa14.16□□□□□ -0.14
PTCH1-222ENST00000551425 NSUN3Q9H649 340 aaKnown RBP14.16□□□□□ -0.14
PTCH1-222ENST00000551425 NFIBO00712 420 aa14.15□□□□□ -0.14
PTCH1-222ENST00000551425 TXNP10599 105 aaKnown RBP14.15□□□□□ -0.14
PTCH1-222ENST00000551425 LTBRP36941 435 aa14.15□□□□□ -0.14
PTCH1-222ENST00000551425 CHMP4BP1P59074 171 aa14.15□□□□□ -0.14
PTCH1-222ENST00000551425 PDE4DQ08499 809 aa14.15□□□□□ -0.14
PTCH1-222ENST00000551425 TCF15Q12870 199 aa14.15□□□□□ -0.14
PTCH1-222ENST00000551425 TRAF7Q6Q0C0 670 aa14.15□□□□□ -0.14
PTCH1-222ENST00000551425 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTCH1-222ENST00000551425 EP400NLQ6ZTU2 488 aa14.15□□□□□ -0.14
PTCH1-222ENST00000551425 RNF135Q8IUD6 432 aa14.15□□□□□ -0.14
PTCH1-222ENST00000551425 MPHOSPH6Q99547 160 aaKnown RBP14.15□□□□□ -0.14
PTCH1-222ENST00000551425 EPB41L4AQ9HCS5 686 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-222ENST00000551425 CLDND1Q9NY35 253 aa14.15□□□□□ -0.14
PTCH1-222ENST00000551425 GFRA3O60609 400 aa14.14□□□□□ -0.15
PTCH1-222ENST00000551425 AMHP03971 560 aa14.14□□□□□ -0.15
PTCH1-222ENST00000551425 TFAP4Q01664 338 aa14.14□□□□□ -0.15
PTCH1-222ENST00000551425 GPM6BQ13491 265 aa14.14□□□□□ -0.15
PTCH1-222ENST00000551425 CTC1Q2NKJ3 1217 aa14.14□□□□□ -0.15
PTCH1-222ENST00000551425 TRIM71Q2Q1W2 868 aaKnown RBP14.14□□□□□ -0.15
PTCH1-222ENST00000551425 PPP4R3BQ5MIZ7 849 aa14.14□□□□□ -0.15
PTCH1-222ENST00000551425 KAT2BQ92831 832 aa14.14□□□□□ -0.15
PTCH1-222ENST00000551425 RANBP17Q9H2T7 1088 aaKnown RBP14.14□□□□□ -0.15
PTCH1-222ENST00000551425 GTF2IRD1Q9UHL9 959 aa14.14□□□□□ -0.15
PTCH1-222ENST00000551425 CACNA1AO00555 2505 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 PTPDC1A2A3K4 754 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 MBTPS2O43462 519 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 RAB11FIP3O75154 756 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 LGR5O75473 907 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 MMP3P08254 477 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 GNAT2P19087 354 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 TDO2P48775 406 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 PDE4BQ07343 736 aa14.13□□□□□ -0.15
PTCH1-222ENST00000551425 PTK7Q13308 1070 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms