RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 TRIM6-TRIM34B2RNG4 842 aa18.09■□□□□ 0.49
RAB5C-205ENST00000550013 ARIH2O95376 493 aa18.09■□□□□ 0.49
RAB5C-205ENST00000550013 DNERQ8NFT8 737 aa18.09■□□□□ 0.49
RAB5C-205ENST00000550013 RILPL2Q969X0 211 aa18.09■□□□□ 0.49
RAB5C-205ENST00000550013 LNPKQ9C0E8 428 aa18.09■□□□□ 0.49
RAB5C-205ENST00000550013 UBA5Q9GZZ9 404 aa18.09■□□□□ 0.49
RAB5C-205ENST00000550013 PNMA2Q9UL42 364 aa18.09■□□□□ 0.49
RAB5C-205ENST00000550013 MYH6P13533 1939 aa18.09■□□□□ 0.49
RAB5C-205ENST00000550013 RAD50Q92878 1312 aa18.08■□□□□ 0.49
RAB5C-205ENST00000550013 A6NJR5 290 aa18.08■□□□□ 0.48
RAB5C-205ENST00000550013 NKRFO15226 690 aaKnown RBP eCLIP18.08■□□□□ 0.48
RAB5C-205ENST00000550013 PFKMP08237 780 aa18.08■□□□□ 0.48
RAB5C-205ENST00000550013 TXNP10599 105 aaKnown RBP18.08■□□□□ 0.48
RAB5C-205ENST00000550013 BRDTQ58F21 947 aaPredicted RBP18.08■□□□□ 0.48
RAB5C-205ENST00000550013 TICAM2Q86XR7 235 aa18.08■□□□□ 0.48
RAB5C-205ENST00000550013 MICALL1Q8N3F8 863 aa18.08■□□□□ 0.48
RAB5C-205ENST00000550013 PRRC2BQ5JSZ5 2229 aaKnown RBP18.08■□□□□ 0.48
RAB5C-205ENST00000550013 TCF20Q9UGU0 1960 aaKnown RBP18.08■□□□□ 0.48
RAB5C-205ENST00000550013 PCP11498 1178 aaKnown RBP18.07■□□□□ 0.48
RAB5C-205ENST00000550013 CHMP4BP1P59074 171 aa18.07■□□□□ 0.48
RAB5C-205ENST00000550013 MRPS5P82675 430 aaKnown RBP18.07■□□□□ 0.48
RAB5C-205ENST00000550013 NFRKBQ6P4R8 1299 aa18.07■□□□□ 0.48
RAB5C-205ENST00000550013 ADAMTS19Q8TE59 1207 aa18.07■□□□□ 0.48
RAB5C-205ENST00000550013 TBC1D5Q92609 795 aa18.07■□□□□ 0.48
RAB5C-205ENST00000550013 MPHOSPH6Q99547 160 aaKnown RBP18.07■□□□□ 0.48
RAB5C-205ENST00000550013 KIAA1217Q5T5P2 1943 aa18.07■□□□□ 0.48
RAB5C-205ENST00000550013 RFXAPO00287 272 aa18.06■□□□□ 0.48
RAB5C-205ENST00000550013 KPNA6O60684 536 aa18.06■□□□□ 0.48
RAB5C-205ENST00000550013 CA3P07451 260 aa18.06■□□□□ 0.48
RAB5C-205ENST00000550013 CDC37Q16543 378 aaPredicted RBP18.06■□□□□ 0.48
RAB5C-205ENST00000550013 GPATCH4Q5T3I0 446 aaKnown RBP18.06■□□□□ 0.48
RAB5C-205ENST00000550013 ESR2Q92731 530 aa18.06■□□□□ 0.48
RAB5C-205ENST00000550013 RNF41Q9H4P4 317 aaPredicted RBP18.06■□□□□ 0.48
RAB5C-205ENST00000550013 CERS4Q9HA82 394 aa18.06■□□□□ 0.48
RAB5C-205ENST00000550013 PTPRSQ13332 1948 aa18.06■□□□□ 0.48
RAB5C-205ENST00000550013 IQCF3P0C7M6 154 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 ACTN1P12814 892 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 SDSP20132 328 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 RFC2P35250 354 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 TMEM67Q5HYA8 995 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 CCDC62Q6P9F0 684 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 DGKHQ86XP1 1220 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 RETREG2Q8NC44 543 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 PNMA1Q8ND90 353 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 RGS22Q8NE09 1264 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 AFG1LQ8WV93 481 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 TAAR1Q96RJ0 339 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 FTOQ9C0B1 505 aaKnown RBP eCLIP18.05■□□□□ 0.48
RAB5C-205ENST00000550013 COL20A1Q9P218 1284 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 XIRP2A4UGR9 3374 aa18.05■□□□□ 0.48
RAB5C-205ENST00000550013 EPOPA6NHQ4 379 aa18.04■□□□□ 0.48
RAB5C-205ENST00000550013 B4DLN1 442 aa18.04■□□□□ 0.48
RAB5C-205ENST00000550013 PITPNM1O00562 1244 aa18.04■□□□□ 0.48
RAB5C-205ENST00000550013 ZNF213O14771 459 aa18.04■□□□□ 0.48
RAB5C-205ENST00000550013 KDM4AO75164 1064 aa18.04■□□□□ 0.48
RAB5C-205ENST00000550013 ARHGEF15O94989 841 aa18.04■□□□□ 0.48
RAB5C-205ENST00000550013 MRPL12P52815 198 aaKnown RBP18.04■□□□□ 0.48
RAB5C-205ENST00000550013 MFAP1P55081 439 aaKnown RBP18.04■□□□□ 0.48
RAB5C-205ENST00000550013 PTPN11Q06124 597 aaPredicted RBP18.04■□□□□ 0.48
RAB5C-205ENST00000550013 LY6KQ17RY6 165 aa18.04■□□□□ 0.48
RAB5C-205ENST00000550013 B4GALNT3Q6L9W6 998 aa18.04■□□□□ 0.48
RAB5C-205ENST00000550013 SEPT14Q6ZU15 432 aa18.04■□□□□ 0.48
RAB5C-205ENST00000550013 ADGRF4Q8IZF3 695 aa18.04■□□□□ 0.48
RAB5C-205ENST00000550013 SYTL5Q8TDW5 730 aaPredicted RBP18.04■□□□□ 0.48
RAB5C-205ENST00000550013 NOD1Q9Y239 953 aa18.04■□□□□ 0.48
RAB5C-205ENST00000550013 ABCB11O95342 1321 aa18.03■□□□□ 0.48
RAB5C-205ENST00000550013 B4E1Z4 1266 aa18.03■□□□□ 0.48
RAB5C-205ENST00000550013 MMP3P08254 477 aa18.03■□□□□ 0.48
RAB5C-205ENST00000550013 TFF2Q03403 129 aa18.03■□□□□ 0.48
RAB5C-205ENST00000550013 ARHGAP1Q07960 439 aa18.03■□□□□ 0.48
RAB5C-205ENST00000550013 BFSP2Q13515 415 aa18.03■□□□□ 0.48
RAB5C-205ENST00000550013 CHST3Q7LGC8 479 aa18.03■□□□□ 0.48
RAB5C-205ENST00000550013 CTAGE1Q96RT6 745 aa18.03■□□□□ 0.48
RAB5C-205ENST00000550013 SLC9A7Q96T83 725 aa18.03■□□□□ 0.48
RAB5C-205ENST00000550013 UHRF1Q96T88 793 aaPredicted RBP18.03■□□□□ 0.48
RAB5C-205ENST00000550013 MYH7BA7E2Y1 1941 aa18.02■□□□□ 0.48
RAB5C-205ENST00000550013 RBAK-RBAKDNI3L0D1 243 aa18.02■□□□□ 0.48
RAB5C-205ENST00000550013 GH1P01241 217 aa18.02■□□□□ 0.48
RAB5C-205ENST00000550013 PTGISQ16647 500 aa18.02■□□□□ 0.48
RAB5C-205ENST00000550013 QRICH1Q2TAL8 776 aa18.02■□□□□ 0.48
RAB5C-205ENST00000550013 GDF6Q6KF10 455 aaPredicted RBP18.02■□□□□ 0.48
RAB5C-205ENST00000550013 CWC27Q6UX04 472 aaKnown RBP18.02■□□□□ 0.48
RAB5C-205ENST00000550013 IQCA1Q86XH1 822 aa18.02■□□□□ 0.48
RAB5C-205ENST00000550013 HERC6Q8IVU3 1022 aa18.02■□□□□ 0.48
RAB5C-205ENST00000550013 PLEKHM2Q8IWE5 1019 aa18.02■□□□□ 0.48
RAB5C-205ENST00000550013 IL27Q8NEV9 243 aa18.02■□□□□ 0.48
RAB5C-205ENST00000550013 KAT2BQ92831 832 aa18.02■□□□□ 0.48
RAB5C-205ENST00000550013 NECAB3Q96P71 396 aaPredicted RBP18.02■□□□□ 0.48
RAB5C-205ENST00000550013 KAT14Q9H8E8 782 aa18.02■□□□□ 0.48
RAB5C-205ENST00000550013 MTCH2Q9Y6C9 303 aa18.02■□□□□ 0.48
RAB5C-205ENST00000550013 TAP1Q03518 808 aa18.01■□□□□ 0.47
RAB5C-205ENST00000550013 KRT40Q6A162 431 aa18.01■□□□□ 0.47
RAB5C-205ENST00000550013 SMC5Q8IY18 1101 aa18.01■□□□□ 0.47
RAB5C-205ENST00000550013 ENAHQ8N8S7 591 aaPredicted RBP18.01■□□□□ 0.47
RAB5C-205ENST00000550013 PHOSPHO2Q8TCD6 241 aa18.01■□□□□ 0.47
RAB5C-205ENST00000550013 NSUN6Q8TEA1 469 aaKnown RBP18.01■□□□□ 0.47
RAB5C-205ENST00000550013 DHX38Q92620 1227 aaKnown RBP18.01■□□□□ 0.47
RAB5C-205ENST00000550013 ANKS1AQ92625 1134 aa18.01■□□□□ 0.47
RAB5C-205ENST00000550013 ZSCAN10Q96SZ4 725 aaPredicted RBP18.01■□□□□ 0.47
RAB5C-205ENST00000550013 RMDN3Q96TC7 470 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms