RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SNHG28P0DPA3 235 aa19.36■□□□□ 0.69
SSH1-208ENST00000548522 USH1GQ495M9 461 aa19.36■□□□□ 0.69
SSH1-208ENST00000548522 GPHNQ9NQX3 736 aaPredicted RBP19.36■□□□□ 0.69
SSH1-208ENST00000548522 ZMYM6O95789 1325 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 WDR19Q8NEZ3 1342 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 LOC102724159A0A0B4J2E5 919 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 A6NJR5 290 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 PFKMP08237 780 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 IQCF3P0C7M6 154 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 KCNQ1P51787 676 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 CHMP4BP1P59074 171 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 PWP2Q15269 919 aaKnown RBP19.35■□□□□ 0.69
SSH1-208ENST00000548522 MCMDC2Q4G0Z9 681 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 TMEM67Q5HYA8 995 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 ERICH6BQ5W0A0 696 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 SCFD2Q8WU76 684 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 ZKSCAN3Q9BRR0 538 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 SUPT16HQ9Y5B9 1047 aaKnown RBP19.35■□□□□ 0.69
SSH1-208ENST00000548522 TANC1Q9C0D5 1861 aa19.35■□□□□ 0.69
SSH1-208ENST00000548522 NEFLP07196 543 aa19.34■□□□□ 0.69
SSH1-208ENST00000548522 TXNP10599 105 aaKnown RBP19.34■□□□□ 0.69
SSH1-208ENST00000548522 NFRKBQ6P4R8 1299 aa19.34■□□□□ 0.69
SSH1-208ENST00000548522 TBC1D5Q92609 795 aa19.34■□□□□ 0.69
SSH1-208ENST00000548522 CTAGE1Q96RT6 745 aa19.34■□□□□ 0.69
SSH1-208ENST00000548522 UBA5Q9GZZ9 404 aa19.34■□□□□ 0.69
SSH1-208ENST00000548522 COL20A1Q9P218 1284 aa19.34■□□□□ 0.69
SSH1-208ENST00000548522 MTCH2Q9Y6C9 303 aa19.34■□□□□ 0.69
SSH1-208ENST00000548522 PRRC2BQ5JSZ5 2229 aaKnown RBP19.34■□□□□ 0.69
SSH1-208ENST00000548522 CCDC171Q6TFL3 1326 aa19.33■□□□□ 0.69
SSH1-208ENST00000548522 RAD50Q92878 1312 aa19.33■□□□□ 0.69
SSH1-208ENST00000548522 PITPNM1O00562 1244 aa19.33■□□□□ 0.68
SSH1-208ENST00000548522 SKIV2LQ15477 1246 aaKnown RBP19.33■□□□□ 0.68
SSH1-208ENST00000548522 TMCO2Q7Z6W1 182 aaPredicted RBP19.33■□□□□ 0.68
SSH1-208ENST00000548522 IL27Q8NEV9 243 aa19.33■□□□□ 0.68
SSH1-208ENST00000548522 DNERQ8NFT8 737 aa19.33■□□□□ 0.68
SSH1-208ENST00000548522 CRBNQ96SW2 442 aa19.33■□□□□ 0.68
SSH1-208ENST00000548522 NKRFO15226 690 aaKnown RBP eCLIP19.32■□□□□ 0.68
SSH1-208ENST00000548522 BMP1P13497 986 aa19.32■□□□□ 0.68
SSH1-208ENST00000548522 RRP1P56182 461 aaKnown RBP19.32■□□□□ 0.68
SSH1-208ENST00000548522 TAP1Q03518 808 aa19.32■□□□□ 0.68
SSH1-208ENST00000548522 HERC6Q8IVU3 1022 aa19.32■□□□□ 0.68
SSH1-208ENST00000548522 AFG1LQ8WV93 481 aa19.32■□□□□ 0.68
SSH1-208ENST00000548522 ARNTL2Q8WYA1 636 aa19.32■□□□□ 0.68
SSH1-208ENST00000548522 SLC9A7Q96T83 725 aa19.32■□□□□ 0.68
SSH1-208ENST00000548522 FTOQ9C0B1 505 aaKnown RBP eCLIP19.32■□□□□ 0.68
SSH1-208ENST00000548522 LCHNA4D1U4 455 aa19.31■□□□□ 0.68
SSH1-208ENST00000548522 ACTN1P12814 892 aa19.31■□□□□ 0.68
SSH1-208ENST00000548522 RFC2P35250 354 aa19.31■□□□□ 0.68
SSH1-208ENST00000548522 ARHGAP1Q07960 439 aa19.31■□□□□ 0.68
SSH1-208ENST00000548522 GPNMBQ14956 572 aa19.31■□□□□ 0.68
SSH1-208ENST00000548522 CDC37Q16543 378 aaPredicted RBP19.31■□□□□ 0.68
SSH1-208ENST00000548522 LY6KQ17RY6 165 aa19.31■□□□□ 0.68
SSH1-208ENST00000548522 BRDTQ58F21 947 aaPredicted RBP19.31■□□□□ 0.68
SSH1-208ENST00000548522 CCDC62Q6P9F0 684 aa19.31■□□□□ 0.68
SSH1-208ENST00000548522 MFSD6Q6ZSS7 791 aa19.31■□□□□ 0.68
SSH1-208ENST00000548522 ZBTB47Q9UFB7 747 aaPredicted RBP19.31■□□□□ 0.68
SSH1-208ENST00000548522 NOD1Q9Y239 953 aa19.31■□□□□ 0.68
SSH1-208ENST00000548522 TET1Q8NFU7 2136 aa19.3■□□□□ 0.68
SSH1-208ENST00000548522 MMP3P08254 477 aa19.3■□□□□ 0.68
SSH1-208ENST00000548522 PTGISQ16647 500 aa19.3■□□□□ 0.68
SSH1-208ENST00000548522 TCTN1Q2MV58 587 aa19.3■□□□□ 0.68
SSH1-208ENST00000548522 GDF6Q6KF10 455 aaPredicted RBP19.3■□□□□ 0.68
SSH1-208ENST00000548522 SEPT14Q6ZU15 432 aa19.3■□□□□ 0.68
SSH1-208ENST00000548522 CHST3Q7LGC8 479 aa19.3■□□□□ 0.68
SSH1-208ENST00000548522 RETREG2Q8NC44 543 aa19.3■□□□□ 0.68
SSH1-208ENST00000548522 SYTL5Q8TDW5 730 aaPredicted RBP19.3■□□□□ 0.68
SSH1-208ENST00000548522 DHX38Q92620 1227 aaKnown RBP19.3■□□□□ 0.68
SSH1-208ENST00000548522 KAT2BQ92831 832 aa19.3■□□□□ 0.68
SSH1-208ENST00000548522 TTC14Q96N46 770 aa19.3■□□□□ 0.68
SSH1-208ENST00000548522 TAAR1Q96RJ0 339 aa19.3■□□□□ 0.68
SSH1-208ENST00000548522 LNPKQ9C0E8 428 aa19.3■□□□□ 0.68
SSH1-208ENST00000548522 TRIM6-TRIM34B2RNG4 842 aa19.29■□□□□ 0.68
SSH1-208ENST00000548522 KPNA6O60684 536 aa19.29■□□□□ 0.68
SSH1-208ENST00000548522 PTPN11Q06124 597 aaPredicted RBP19.29■□□□□ 0.68
SSH1-208ENST00000548522 MPHOSPH6Q99547 160 aaKnown RBP19.29■□□□□ 0.68
SSH1-208ENST00000548522 TSPYL2Q9H2G4 693 aaPredicted RBP19.29■□□□□ 0.68
SSH1-208ENST00000548522 PNMA2Q9UL42 364 aa19.29■□□□□ 0.68
SSH1-208ENST00000548522 TCF20Q9UGU0 1960 aaKnown RBP19.28■□□□□ 0.68
SSH1-208ENST00000548522 COL4A4P53420 1690 aaPredicted RBP19.28■□□□□ 0.68
SSH1-208ENST00000548522 PTPRSQ13332 1948 aa19.28■□□□□ 0.68
SSH1-208ENST00000548522 GTPBP6O43824 516 aaPredicted RBP19.28■□□□□ 0.68
SSH1-208ENST00000548522 POU3F3P20264 500 aaPredicted RBP19.28■□□□□ 0.68
SSH1-208ENST00000548522 DEFB103AP81534 67 aa19.28■□□□□ 0.68
SSH1-208ENST00000548522 BFSP2Q13515 415 aa19.28■□□□□ 0.68
SSH1-208ENST00000548522 GPATCH4Q5T3I0 446 aaKnown RBP19.28■□□□□ 0.68
SSH1-208ENST00000548522 PNMA1Q8ND90 353 aa19.28■□□□□ 0.68
SSH1-208ENST00000548522 PHOSPHO2Q8TCD6 241 aa19.28■□□□□ 0.68
SSH1-208ENST00000548522 ESR2Q92731 530 aa19.28■□□□□ 0.68
SSH1-208ENST00000548522 RILPL2Q969X0 211 aa19.28■□□□□ 0.68
SSH1-208ENST00000548522 LPXNO60711 386 aa19.27■□□□□ 0.68
SSH1-208ENST00000548522 KDM4AO75164 1064 aa19.27■□□□□ 0.68
SSH1-208ENST00000548522 PCP11498 1178 aaKnown RBP19.27■□□□□ 0.68
SSH1-208ENST00000548522 WDR5P61964 334 aaKnown RBP19.27■□□□□ 0.68
SSH1-208ENST00000548522 GRB10Q13322 594 aa19.27■□□□□ 0.68
SSH1-208ENST00000548522 HDAC1Q13547 482 aaPredicted RBP19.27■□□□□ 0.68
SSH1-208ENST00000548522 ADGRF4Q8IZF3 695 aa19.27■□□□□ 0.68
SSH1-208ENST00000548522 RGS22Q8NE09 1264 aa19.27■□□□□ 0.68
SSH1-208ENST00000548522 TLL1O43897 1013 aa19.26■□□□□ 0.67
SSH1-208ENST00000548522 BAIAP3O94812 1187 aa19.26■□□□□ 0.67
SSH1-208ENST00000548522 GH1P01241 217 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms