RNA–Protein interactions for RNA: ENST00000547381.1

SSH1-206, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-206ENST00000547381 CCDC69A6NI79 296 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 PPP1R11O60927 126 aaPredicted RBP14.38□□□□□ -0.11
SSH1-206ENST00000547381 CFBP00751 764 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 CALM1P0DP23 149 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 CALM2P0DP24 149 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 CALM3P0DP25 149 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 RAG1P15918 1043 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 SMARCA1P28370 1054 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 HSD17B4P51659 736 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 GHRHRQ02643 423 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 FAAP100Q0VG06 881 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 TTLL4Q14679 1199 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 STXBP2Q15833 593 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 ARHGEF16Q5VV41 709 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 CXCL17Q6UXB2 119 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 SH3RF1Q7Z6J0 888 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 HOMER1Q86YM7 354 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 BADQ92934 168 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 TAAR1Q96RJ0 339 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 PIGSQ96S52 555 aa14.38□□□□□ -0.11
SSH1-206ENST00000547381 COL6A3P12111 3177 aa14.37□□□□□ -0.11
SSH1-206ENST00000547381 SH2B2O14492 632 aaPredicted RBP14.37□□□□□ -0.11
SSH1-206ENST00000547381 TLR3O15455 904 aaKnown RBP14.37□□□□□ -0.11
SSH1-206ENST00000547381 CYTH3O43739 400 aa14.37□□□□□ -0.11
SSH1-206ENST00000547381 EIF3JO75822 258 aaKnown RBP14.37□□□□□ -0.11
SSH1-206ENST00000547381 KRT32Q14532 448 aa14.37□□□□□ -0.11
SSH1-206ENST00000547381 GPR153Q6NV75 609 aa14.37□□□□□ -0.11
SSH1-206ENST00000547381 OR6J1Q8NGC5 347 aa14.37□□□□□ -0.11
SSH1-206ENST00000547381 SPZ1Q9BXG8 430 aa14.37□□□□□ -0.11
SSH1-206ENST00000547381 POLR3EQ9NVU0 708 aa14.37□□□□□ -0.11
SSH1-206ENST00000547381 COL20A1Q9P218 1284 aa14.37□□□□□ -0.11
SSH1-206ENST00000547381 LTBP2Q14767 1821 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 GCOM1H8Y6P7 765 aaPredicted RBP14.36□□□□□ -0.11
SSH1-206ENST00000547381 OPLAHO14841 1288 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 KPNA6O60684 536 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 POLR2MP0CAP2 368 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 TXNP10599 105 aaKnown RBP14.36□□□□□ -0.11
SSH1-206ENST00000547381 ITGA7Q13683 1181 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 SLC35G1Q2M3R5 365 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 TSGA10IPQ3SY00 556 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 TMEM63BQ5T3F8 832 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 SYNE3Q6ZMZ3 975 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 SGMS1Q86VZ5 419 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 SLC43A3Q8NBI5 491 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 RRP36Q96EU6 259 aaKnown RBP14.36□□□□□ -0.11
SSH1-206ENST00000547381 NEK1Q96PY6 1258 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 GPHNQ9NQX3 736 aaPredicted RBP14.36□□□□□ -0.11
SSH1-206ENST00000547381 PXMP2Q9NR77 195 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 SLC12A7Q9Y666 1083 aa14.36□□□□□ -0.11
SSH1-206ENST00000547381 A6NJR5 290 aa14.35□□□□□ -0.11
SSH1-206ENST00000547381 SOX1O00570 391 aaPredicted RBP14.35□□□□□ -0.11
SSH1-206ENST00000547381 TIMP1P01033 207 aa14.35□□□□□ -0.11
SSH1-206ENST00000547381 NR3C2P08235 984 aa14.35□□□□□ -0.11
SSH1-206ENST00000547381 HMGB1P09429 215 aaKnown RBP14.35□□□□□ -0.11
SSH1-206ENST00000547381 EIF2AK2P19525 551 aaKnown RBP14.35□□□□□ -0.11
SSH1-206ENST00000547381 CCDC62Q6P9F0 684 aa14.35□□□□□ -0.11
SSH1-206ENST00000547381 FAM126BQ8IXS8 530 aa14.35□□□□□ -0.11
SSH1-206ENST00000547381 MYL10Q9BUA6 226 aa14.35□□□□□ -0.11
SSH1-206ENST00000547381 SEC63Q9UGP8 760 aaKnown RBP14.35□□□□□ -0.11
SSH1-206ENST00000547381 TBX21Q9UL17 535 aa14.35□□□□□ -0.11
SSH1-206ENST00000547381 A0A0C4DFX4 3053 aa14.35□□□□□ -0.11
SSH1-206ENST00000547381 PTGS1P23219 599 aa14.34□□□□□ -0.11
SSH1-206ENST00000547381 PURAQ00577 322 aaKnown RBP14.34□□□□□ -0.11
SSH1-206ENST00000547381 FPGSQ05932 587 aa14.34□□□□□ -0.11
SSH1-206ENST00000547381 KCNV1Q6PIU1 500 aa14.34□□□□□ -0.11
SSH1-206ENST00000547381 SEPT14Q6ZU15 432 aa14.34□□□□□ -0.11
SSH1-206ENST00000547381 DHX32Q7L7V1 743 aaKnown RBP14.34□□□□□ -0.11
SSH1-206ENST00000547381 LRCH3Q96II8 777 aa14.34□□□□□ -0.11
SSH1-206ENST00000547381 MTG1Q9BT17 334 aaPredicted RBP14.34□□□□□ -0.11
SSH1-206ENST00000547381 BAZ2BQ9UIF8 2168 aaKnown RBP14.34□□□□□ -0.11
SSH1-206ENST00000547381 CD4P01730 458 aa14.33□□□□□ -0.12
SSH1-206ENST00000547381 MYL3P08590 195 aa14.33□□□□□ -0.12
SSH1-206ENST00000547381 ITGB8P26012 769 aa14.33□□□□□ -0.12
SSH1-206ENST00000547381 HOXA13P31271 388 aaPredicted RBP14.33□□□□□ -0.12
SSH1-206ENST00000547381 ERICH6BQ5W0A0 696 aa14.33□□□□□ -0.12
SSH1-206ENST00000547381 MFSD5Q6N075 450 aa14.33□□□□□ -0.12
SSH1-206ENST00000547381 VSIG10LQ86VR7 867 aa14.33□□□□□ -0.12
SSH1-206ENST00000547381 FANCBQ8NB91 859 aa14.33□□□□□ -0.12
SSH1-206ENST00000547381 PDCD2LQ9BRP1 358 aa14.33□□□□□ -0.12
SSH1-206ENST00000547381 GRIN2DO15399 1336 aa14.33□□□□□ -0.12
SSH1-206ENST00000547381 REC8O95072 547 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 ARIH2O95376 493 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 GH1P01241 217 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 SUPT20HL2P0C7V6 817 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 CCND2P30279 289 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 EXOSC10Q01780 885 aaKnown RBP14.32□□□□□ -0.12
SSH1-206ENST00000547381 SHHQ15465 462 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 LY6KQ17RY6 165 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 TMEM199Q8N511 208 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 SRBD1Q8N5C6 995 aaKnown RBP14.32□□□□□ -0.12
SSH1-206ENST00000547381 PIBF1Q8WXW3 757 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 COPS5Q92905 334 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 CUL5Q93034 780 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 LRRC2Q9BYS8 371 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 DDX41Q9UJV9 622 aaKnown RBP14.32□□□□□ -0.12
SSH1-206ENST00000547381 MRVI1Q9Y6F6 885 aa14.32□□□□□ -0.12
SSH1-206ENST00000547381 KIAA1217Q5T5P2 1943 aa14.31□□□□□ -0.12
SSH1-206ENST00000547381 PIK3CDO00329 1044 aa14.31□□□□□ -0.12
SSH1-206ENST00000547381 STAM2O75886 525 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms