RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 DIS3Q9Y2L1 958 aaKnown RBP19.75■□□□□ 0.75
RBFOX1-207ENST00000547338 SLC12A7Q9Y666 1083 aa19.75■□□□□ 0.75
RBFOX1-207ENST00000547338 IFIT3O14879 490 aaKnown RBP19.74■□□□□ 0.75
RBFOX1-207ENST00000547338 LIG1P18858 919 aa19.74■□□□□ 0.75
RBFOX1-207ENST00000547338 MSNP26038 577 aaKnown RBP19.74■□□□□ 0.75
RBFOX1-207ENST00000547338 MUM1L1Q5H9M0 696 aa19.74■□□□□ 0.75
RBFOX1-207ENST00000547338 PRPF38BQ5VTL8 546 aaKnown RBP19.74■□□□□ 0.75
RBFOX1-207ENST00000547338 ADALQ6DHV7 355 aa19.74■□□□□ 0.75
RBFOX1-207ENST00000547338 NFXL1Q6ZNB6 911 aa19.74■□□□□ 0.75
RBFOX1-207ENST00000547338 ANKLE1Q8NAG6 615 aa19.74■□□□□ 0.75
RBFOX1-207ENST00000547338 SENP2Q9HC62 589 aa19.74■□□□□ 0.75
RBFOX1-207ENST00000547338 GOLGA8HP0CJ92 632 aa19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 CAPN2P17655 700 aa19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 CCDC73Q6ZRK6 1079 aa19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 RNF214Q8ND24 703 aa19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 TINF2Q9BSI4 451 aa19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 A1CFQ9NQ94 594 aaKnown RBP19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 GPHNQ9NQX3 736 aaPredicted RBP19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 RNF146Q9NTX7 359 aa19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 SLC5A4Q9NY91 659 aa19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 DDX20Q9UHI6 824 aaKnown RBP19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 CTDP1Q9Y5B0 961 aaPredicted RBP19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 MCM3APO60318 1980 aa19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 ASTN1O14525 1302 aa19.73■□□□□ 0.75
RBFOX1-207ENST00000547338 ICAM1P05362 532 aa19.72■□□□□ 0.75
RBFOX1-207ENST00000547338 TPM3P06753 285 aa19.72■□□□□ 0.75
RBFOX1-207ENST00000547338 IFNAR1P17181 557 aa19.72■□□□□ 0.75
RBFOX1-207ENST00000547338 CCDC178Q5BJE1 867 aa19.72■□□□□ 0.75
RBFOX1-207ENST00000547338 FAM200AQ8TCP9 573 aa19.72■□□□□ 0.75
RBFOX1-207ENST00000547338 RTN4Q9NQC3 1192 aaKnown RBP19.72■□□□□ 0.75
RBFOX1-207ENST00000547338 PFASO15067 1338 aa19.72■□□□□ 0.75
RBFOX1-207ENST00000547338 DNAH12Q6ZR08 3092 aa19.72■□□□□ 0.75
RBFOX1-207ENST00000547338 GOLGA8AA7E2F4 631 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 COL6A1P12109 1028 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 ALAS1P13196 640 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 CNTN2Q02246 1040 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 TRIM29Q14134 588 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 SASS6Q6UVJ0 657 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 FAM133AQ8N9E0 248 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 TRERF1Q96PN7 1200 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 USP28Q96RU2 1077 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 ACAD9Q9H845 621 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 FBXO40Q9UH90 709 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 SNAI1O95863 264 aaPredicted RBP19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 ZNF865P0CJ78 1059 aaPredicted RBP19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 FAM160A1Q05DH4 1040 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 SSRP1Q08945 709 aaKnown RBP19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 WTAPQ15007 396 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 NTRK3Q16288 839 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 MAMDC4Q6UXC1 1216 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 UBAC1Q9BSL1 405 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 ALG1Q9BT22 464 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 UBA5Q9GZZ9 404 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 KAT14Q9H8E8 782 aa19.71■□□□□ 0.75
RBFOX1-207ENST00000547338 MYH15Q9Y2K3 1946 aa19.7■□□□□ 0.74
RBFOX1-207ENST00000547338 DTNBO60941 627 aa19.7■□□□□ 0.74
RBFOX1-207ENST00000547338 CNGA1P29973 690 aa19.7■□□□□ 0.74
RBFOX1-207ENST00000547338 TYRO3Q06418 890 aa19.7■□□□□ 0.74
RBFOX1-207ENST00000547338 SLC35G1Q2M3R5 365 aa19.7■□□□□ 0.74
RBFOX1-207ENST00000547338 TKFCQ3LXA3 575 aa19.7■□□□□ 0.74
RBFOX1-207ENST00000547338 GPATCH4Q5T3I0 446 aaKnown RBP19.7■□□□□ 0.74
RBFOX1-207ENST00000547338 MYSM1Q5VVJ2 828 aa19.7■□□□□ 0.74
RBFOX1-207ENST00000547338 ANKRD35Q8N283 1001 aa19.7■□□□□ 0.74
RBFOX1-207ENST00000547338 LINC00301Q8NCQ3 95 aa19.7■□□□□ 0.74
RBFOX1-207ENST00000547338 USP25Q9UHP3 1055 aa19.7■□□□□ 0.74
RBFOX1-207ENST00000547338 CCPG1Q9ULG6 757 aa19.7■□□□□ 0.74
RBFOX1-207ENST00000547338 LRRC37A2A6NM11 1700 aa19.69■□□□□ 0.74
RBFOX1-207ENST00000547338 SOWAHBA6NEL2 793 aa19.69■□□□□ 0.74
RBFOX1-207ENST00000547338 SEPT4O43236 478 aa19.69■□□□□ 0.74
RBFOX1-207ENST00000547338 ANO1Q5XXA6 986 aa19.69■□□□□ 0.74
RBFOX1-207ENST00000547338 ZNF467Q7Z7K2 595 aaPredicted RBP19.69■□□□□ 0.74
RBFOX1-207ENST00000547338 TRIM22Q8IYM9 498 aa19.69■□□□□ 0.74
RBFOX1-207ENST00000547338 STAG2Q8N3U4 1231 aa19.69■□□□□ 0.74
RBFOX1-207ENST00000547338 CLEC4DQ8WXI8 215 aa19.69■□□□□ 0.74
RBFOX1-207ENST00000547338 NRBP1Q9UHY1 535 aa19.69■□□□□ 0.74
RBFOX1-207ENST00000547338 SYNGAP1Q96PV0 1343 aa19.69■□□□□ 0.74
RBFOX1-207ENST00000547338 NFIBO00712 420 aa19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 ZNF500O60304 480 aaPredicted RBP19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 KINO60870 393 aaKnown RBP19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 NR1I2O75469 434 aa19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 CALM1P0DP23 149 aa19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 CALM2P0DP24 149 aa19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 CALM3P0DP25 149 aa19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 U2AF2P26368 475 aaKnown RBP eCLIP19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 ME1P48163 572 aa19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 STK38Q15208 465 aa19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 SF3A1Q15459 793 aaKnown RBP19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 IFIT1BQ5T764 474 aaKnown RBP19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 NECAB2Q7Z6G3 386 aa19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 MSL3Q8N5Y2 521 aaKnown RBP19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 ENGASEQ8NFI3 743 aa19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 MRPS27Q92552 414 aaKnown RBP19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 LENG1Q96BZ8 264 aaPredicted RBP19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 PURBQ96QR8 312 aaKnown RBP19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 KATNBL1Q9H079 304 aa19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 CYP39A1Q9NYL5 469 aa19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 RANBP2P49792 3224 aaKnown RBP19.68■□□□□ 0.74
RBFOX1-207ENST00000547338 H0YGN5 161 aa19.67■□□□□ 0.74
RBFOX1-207ENST00000547338 PPP6R2O75170 966 aa19.67■□□□□ 0.74
RBFOX1-207ENST00000547338 ASPRV1Q53RT3 343 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms