RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 PABPC5Q96DU9 382 aaKnown RBP14.28□□□□□ -0.12
BRF1-207ENST00000546417 GMCL1Q96IK5 515 aa14.28□□□□□ -0.12
BRF1-207ENST00000546417 PURBQ96QR8 312 aaKnown RBP14.28□□□□□ -0.12
BRF1-207ENST00000546417 HAUS7Q99871 368 aa14.28□□□□□ -0.12
BRF1-207ENST00000546417 INSL6Q9Y581 213 aa14.28□□□□□ -0.12
BRF1-207ENST00000546417 TRIOO75962 3097 aa14.27□□□□□ -0.12
BRF1-207ENST00000546417 GSG1L2A8MUP6 293 aa14.27□□□□□ -0.13
BRF1-207ENST00000546417 CXCL10P02778 98 aa14.27□□□□□ -0.13
BRF1-207ENST00000546417 CHGBP05060 677 aa14.27□□□□□ -0.13
BRF1-207ENST00000546417 ATP5JP18859 108 aa14.27□□□□□ -0.13
BRF1-207ENST00000546417 FOXK2Q01167 660 aa14.27□□□□□ -0.13
BRF1-207ENST00000546417 GPNMBQ14956 572 aa14.27□□□□□ -0.13
BRF1-207ENST00000546417 PPP2R5BQ15173 497 aa14.27□□□□□ -0.13
BRF1-207ENST00000546417 TIGD5Q53EQ6 642 aa14.27□□□□□ -0.13
BRF1-207ENST00000546417 EP400NLQ6ZTU2 488 aa14.27□□□□□ -0.13
BRF1-207ENST00000546417 STRBPQ96SI9 672 aaKnown RBP14.27□□□□□ -0.13
BRF1-207ENST00000546417 PHOX2BQ99453 314 aa14.27□□□□□ -0.13
BRF1-207ENST00000546417 PRRX2Q99811 253 aa14.27□□□□□ -0.13
BRF1-207ENST00000546417 CCPG1Q9ULG6 757 aa14.27□□□□□ -0.13
BRF1-207ENST00000546417 PRDM1O75626 825 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 TSPY3P0CV98 308 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 TSPY8P0CW00 308 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 IRS1P35568 1242 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 PTPN5P54829 565 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 CHMP4BP1P59074 171 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 BAATQ14032 418 aaPredicted RBP14.26□□□□□ -0.13
BRF1-207ENST00000546417 FAM117BQ6P1L5 589 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 BANK1Q8NDB2 785 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 NEDD1Q8NHV4 660 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 SCFD2Q8WU76 684 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 SAMD11Q96NU1 681 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 MPHOSPH6Q99547 160 aaKnown RBP14.26□□□□□ -0.13
BRF1-207ENST00000546417 POP1Q99575 1024 aaKnown RBP14.26□□□□□ -0.13
BRF1-207ENST00000546417 C17orf80Q9BSJ5 609 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 BCL11AQ9H165 835 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 PRR12Q9ULL5 1215 aa14.26□□□□□ -0.13
BRF1-207ENST00000546417 NBNO60934 754 aa14.25□□□□□ -0.13
BRF1-207ENST00000546417 MCCP23508 829 aa14.25□□□□□ -0.13
BRF1-207ENST00000546417 RBL2Q08999 1139 aa14.25□□□□□ -0.13
BRF1-207ENST00000546417 PKN1Q16512 942 aa14.25□□□□□ -0.13
BRF1-207ENST00000546417 HERC4Q5GLZ8 1057 aaPredicted RBP14.25□□□□□ -0.13
BRF1-207ENST00000546417 RCSD1Q6JBY9 416 aa14.25□□□□□ -0.13
BRF1-207ENST00000546417 GDF6Q6KF10 455 aaPredicted RBP14.25□□□□□ -0.13
BRF1-207ENST00000546417 SESTD1Q86VW0 696 aa14.25□□□□□ -0.13
BRF1-207ENST00000546417 ANKS1AQ92625 1134 aa14.25□□□□□ -0.13
BRF1-207ENST00000546417 PLIN4Q96Q06 1357 aa14.24□□□□□ -0.13
BRF1-207ENST00000546417 NCK2O43639 380 aa14.24□□□□□ -0.13
BRF1-207ENST00000546417 ICAM1P05362 532 aa14.24□□□□□ -0.13
BRF1-207ENST00000546417 TXNP10599 105 aaKnown RBP14.24□□□□□ -0.13
BRF1-207ENST00000546417 CKBP12277 381 aa14.24□□□□□ -0.13
BRF1-207ENST00000546417 SNAP25P60880 206 aa14.24□□□□□ -0.13
BRF1-207ENST00000546417 PDE4DQ08499 809 aa14.24□□□□□ -0.13
BRF1-207ENST00000546417 COL19A1Q14993 1142 aa14.24□□□□□ -0.13
BRF1-207ENST00000546417 PPP4R3BQ5MIZ7 849 aa14.24□□□□□ -0.13
BRF1-207ENST00000546417 KCTD1Q719H9 257 aa14.24□□□□□ -0.13
BRF1-207ENST00000546417 BMP8AQ7Z5Y6 402 aa14.24□□□□□ -0.13
BRF1-207ENST00000546417 CTAGE1Q96RT6 745 aa14.24□□□□□ -0.13
BRF1-207ENST00000546417 PTPDC1A2A3K4 754 aa14.23□□□□□ -0.13
BRF1-207ENST00000546417 TDO2P48775 406 aa14.23□□□□□ -0.13
BRF1-207ENST00000546417 PDE4BQ07343 736 aa14.23□□□□□ -0.13
BRF1-207ENST00000546417 EPC2Q52LR7 807 aa14.23□□□□□ -0.13
BRF1-207ENST00000546417 TCEAL5Q5H9L2 206 aa14.23□□□□□ -0.13
BRF1-207ENST00000546417 PRSS33Q8NF86 280 aa14.23□□□□□ -0.13
BRF1-207ENST00000546417 DHX38Q92620 1227 aaKnown RBP14.23□□□□□ -0.13
BRF1-207ENST00000546417 COPS5Q92905 334 aa14.23□□□□□ -0.13
BRF1-207ENST00000546417 CHMP4CQ96CF2 233 aa14.23□□□□□ -0.13
BRF1-207ENST00000546417 NSUN3Q9H649 340 aaKnown RBP14.23□□□□□ -0.13
BRF1-207ENST00000546417 CLDND1Q9NY35 253 aa14.23□□□□□ -0.13
BRF1-207ENST00000546417 MUTYHQ9UIF7 546 aa14.23□□□□□ -0.13
BRF1-207ENST00000546417 ZDBF2Q9HCK1 2354 aa14.23□□□□□ -0.13
BRF1-207ENST00000546417 MICAL3Q7RTP6 2002 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 USP34Q70CQ2 3546 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 CFAP54Q96N23 3096 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 TECTAO75443 2155 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 B4DLN1 442 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 H3BNC9 293 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 RAB11FIP3O75154 756 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 AMHP03971 560 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 RLBP1P12271 317 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 GNAT2P19087 354 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 MRPL12P52815 198 aaKnown RBP14.22□□□□□ -0.13
BRF1-207ENST00000546417 HTRA4P83105 476 aaPredicted RBP14.22□□□□□ -0.13
BRF1-207ENST00000546417 TFAP4Q01664 338 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 GPM6BQ13491 265 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 TCTN1Q2MV58 587 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 SP7Q8TDD2 431 aaPredicted RBP14.22□□□□□ -0.13
BRF1-207ENST00000546417 EDAQ92838 391 aa14.22□□□□□ -0.13
BRF1-207ENST00000546417 NFIBO00712 420 aa14.21□□□□□ -0.13
BRF1-207ENST00000546417 APPP05067 770 aa14.21□□□□□ -0.13
BRF1-207ENST00000546417 SLC3A2P08195 630 aaKnown RBP14.21□□□□□ -0.13
BRF1-207ENST00000546417 CALML3P27482 149 aa14.21□□□□□ -0.13
BRF1-207ENST00000546417 PTK7Q13308 1070 aa14.21□□□□□ -0.13
BRF1-207ENST00000546417 SMAD2Q15796 467 aaKnown RBP14.21□□□□□ -0.13
BRF1-207ENST00000546417 IER5LQ5T953 404 aa14.21□□□□□ -0.13
BRF1-207ENST00000546417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.21□□□□□ -0.13
BRF1-207ENST00000546417 RNF135Q8IUD6 432 aa14.21□□□□□ -0.13
BRF1-207ENST00000546417 MYOCDQ8IZQ8 938 aa14.21□□□□□ -0.13
BRF1-207ENST00000546417 DNERQ8NFT8 737 aa14.21□□□□□ -0.13
BRF1-207ENST00000546417 PBXIP1Q96AQ6 731 aa14.21□□□□□ -0.13
BRF1-207ENST00000546417 RANBP17Q9H2T7 1088 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms