RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 GADD45BO75293 160 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-218ENST00000545889 GSDMDP57764 484 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 FAM102BQ5T8I3 360 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 PRAMEF18Q5VWM3 479 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 C1orf228Q6PIY5 440 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 MMS19Q96T76 1030 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 CCDC77Q9BR77 488 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 AMNQ9BXJ7 453 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 CPVLQ9H3G5 476 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 ZSWIM4Q9H7M6 989 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 FAM204AQ9H8W3 233 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 PI4KBQ9UBF8 816 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-218ENST00000545889 PPP1R2P41236 205 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 TOB2Q14106 344 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-218ENST00000545889 INF2Q27J81 1249 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 KRT40Q6A162 431 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 DCUN1D2Q6PH85 259 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 AIFM3Q96NN9 605 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 WRNIP1Q96S55 665 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 GJB4Q9NTQ9 266 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 ODF2LQ9ULJ1 636 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 AGTPBP1Q9UPW5 1226 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 KCNH4Q9UQ05 1017 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 LIG4P49917 911 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 SNW1Q13573 536 aaKnown RBP9.48□□□□□ -0.89
CLIP1-218ENST00000545889 TTC38Q5R3I4 469 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 CLEC10AQ8IUN9 316 aa9.48□□□□□ -0.89
CLIP1-218ENST00000545889 PRPF38AQ8NAV1 312 aaKnown RBP9.48□□□□□ -0.89
CLIP1-218ENST00000545889 PRDM5Q9NQX1 630 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-218ENST00000545889 INO80B-WBP1J3KQ70 363 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 SH2B2O14492 632 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 GCNT3O95395 438 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 PSEN1P49768 467 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 RSRC2Q7L4I2 434 aaKnown RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 SAMD7Q7Z3H4 446 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 SLC7A3Q8WY07 619 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 GPKOWQ92917 476 aaPredicted RBP eCLIP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 INO80BQ9C086 356 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 LARSQ9P2J5 1176 aaKnown RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 PARP2Q9UGN5 583 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 SWAP70Q9UH65 585 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 POLIQ9UNA4 740 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 ZHX2Q9Y6X8 837 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 E7EVH7 732 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 TNPO2O14787 897 aaKnown RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 OATP04181 439 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 XPAP23025 273 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 MCM3P25205 808 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 CRY2Q49AN0 593 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 LIN9Q5TKA1 542 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 USP17L2Q6R6M4 530 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 CCDC63Q8NA47 563 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 GABPB2Q8TAK5 448 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 PPP2R3CQ969Q6 453 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 MRPL44Q9H9J2 332 aaKnown RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 HESX1Q9UBX0 185 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 KDM3BQ7LBC6 1761 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 MYO3BQ8WXR4 1341 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 SPDYE16A6NNV3 312 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 H0YCG3 227 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 FOSP01100 380 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 SLC16A2P36021 539 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 YWHAEP62258 255 aaKnown RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 TFDP1Q14186 410 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 SPDYE2Q495Y8 402 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 GPATCH4Q5T3I0 446 aaKnown RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 CDC42EP5Q6NZY7 148 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 CNNM4Q6P4Q7 775 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 MICALL2Q8IY33 904 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 CDHR1Q96JP9 859 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 LLPHQ9BRT6 129 aaKnown RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 CNOT7Q9UIV1 285 aaKnown RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 TYW5A2RUC4 315 aaKnown RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 CALUO43852 315 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 ZNF157P51786 506 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 TAF1CQ15572 869 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 KCTD1Q719H9 257 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 FHDC1Q9C0D6 1143 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-218ENST00000545889 ARFGAP3Q9NP61 516 aa9.47□□□□□ -0.89
CLIP1-218ENST00000545889 A0A1W2PRG0 241 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 TULP2O00295 520 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 GH2P01242 217 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 TNFAIP3P21580 790 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 ARPP19P56211 112 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 TGFB2P61812 414 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 MFSD14CQ5VZR4 134 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 DYMQ7RTS9 669 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 CEP57Q86XR8 500 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 RDH13Q8NBN7 331 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 ATP6V0A1Q93050 837 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 NACC1Q96RE7 527 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 TEKT3Q9BXF9 490 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.46□□□□□ -0.89
CLIP1-218ENST00000545889 TACC1O75410 805 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 TNNC2P02585 160 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 TMEM191BP0C7N4 346 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 NFIAQ12857 509 aa9.46□□□□□ -0.89
CLIP1-218ENST00000545889 APOBEC3FQ8IUX4 373 aaKnown RBP9.46□□□□□ -0.89
CLIP1-218ENST00000545889 STAG1Q8WVM7 1258 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms