RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 FAM178BQ8IXR5 827 aa11.24□□□□□ -0.61
C2CD3-220ENST00000544293 GDPD5Q8WTR4 605 aa11.24□□□□□ -0.61
C2CD3-220ENST00000544293 WNT8BQ93098 351 aa11.24□□□□□ -0.61
C2CD3-220ENST00000544293 FTOQ9C0B1 505 aaKnown RBP eCLIP11.24□□□□□ -0.61
C2CD3-220ENST00000544293 ZNF287Q9HBT7 754 aa11.24□□□□□ -0.61
C2CD3-220ENST00000544293 LMCD1Q9NZU5 365 aa11.24□□□□□ -0.61
C2CD3-220ENST00000544293 MCM3APO60318 1980 aa11.24□□□□□ -0.61
C2CD3-220ENST00000544293 LOC102724159A0A0B4J2E5 919 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 BAIAP3O94812 1187 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 IL9P15248 144 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 CPT1AP50416 773 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 RPS6P62753 249 aaKnown RBP11.23□□□□□ -0.61
C2CD3-220ENST00000544293 HNRNPUQ00839 825 aaKnown RBP eCLIP11.23□□□□□ -0.61
C2CD3-220ENST00000544293 PDE4BQ07343 736 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 HIC1Q14526 733 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 MBTPS1Q14703 1052 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 PWP2Q15269 919 aaKnown RBP11.23□□□□□ -0.61
C2CD3-220ENST00000544293 TRIM71Q2Q1W2 868 aaKnown RBP11.23□□□□□ -0.61
C2CD3-220ENST00000544293 LEXMQ3ZCV2 418 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 FAM47CQ5HY64 1035 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 ZMYM1Q5SVZ6 1142 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 VPS53Q5VIR6 699 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 SESTD1Q86VW0 696 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 GJD3Q8N144 294 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 RETREG2Q8NC44 543 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 PI4K2BQ8TCG2 481 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 OTUD7AQ8TE49 926 aaPredicted RBP11.23□□□□□ -0.61
C2CD3-220ENST00000544293 TBC1D5Q92609 795 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 ANKS1AQ92625 1134 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 DCTPP1Q9H773 170 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 STX8Q9UNK0 236 aa11.23□□□□□ -0.61
C2CD3-220ENST00000544293 TRANK1O15050 2925 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 LINC01553A4QN01 128 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 KIF28PB7ZC32 967 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 GJB5O95377 273 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 ZFYP08048 801 aaPredicted RBP11.22□□□□□ -0.61
C2CD3-220ENST00000544293 CALML3P27482 149 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 RBL2Q08999 1139 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 IKQ13123 557 aaPredicted RBP11.22□□□□□ -0.61
C2CD3-220ENST00000544293 PTGISQ16647 500 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 SYDE2Q5VT97 1194 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 TMEM47Q9BQJ4 181 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 UBE2ZQ9H832 354 aaPredicted RBP11.22□□□□□ -0.61
C2CD3-220ENST00000544293 BRWD1Q9NSI6 2320 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 ADD3Q9UEY8 706 aaKnown RBP11.22□□□□□ -0.61
C2CD3-220ENST00000544293 ISY1Q9ULR0 285 aaKnown RBP11.22□□□□□ -0.61
C2CD3-220ENST00000544293 MTMR7Q9Y216 660 aa11.22□□□□□ -0.61
C2CD3-220ENST00000544293 TET1Q8NFU7 2136 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 FRMPD2Q68DX3 1309 aaPredicted RBP11.21□□□□□ -0.61
C2CD3-220ENST00000544293 PTPDC1A2A3K4 754 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 GRXCR2A6NFK2 248 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 PRR33A8MZF0 331 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 NKRFO15226 690 aaKnown RBP eCLIP11.21□□□□□ -0.61
C2CD3-220ENST00000544293 KPNA6O60684 536 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 TXNP10599 105 aaKnown RBP11.21□□□□□ -0.61
C2CD3-220ENST00000544293 SELPP16109 830 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 ARHGAP1Q07960 439 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 BFSP2Q13515 415 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.21□□□□□ -0.61
C2CD3-220ENST00000544293 RNF207Q6ZRF8 634 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 NEK9Q8TD19 979 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 AFAP1L1Q8TED9 768 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 DCAF4Q8WV16 495 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 AFG1LQ8WV93 481 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 RAD9AQ99638 391 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 OSBPL7Q9BZF2 842 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 NAPBQ9H115 298 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 GPHNQ9NQX3 736 aaPredicted RBP11.21□□□□□ -0.61
C2CD3-220ENST00000544293 COL20A1Q9P218 1284 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 ANAPC4Q9UJX5 808 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 MTUS1Q9ULD2 1270 aa11.21□□□□□ -0.61
C2CD3-220ENST00000544293 TSPY2A6NKD2 308 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 ORC4O43929 436 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 MMP3P08254 477 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 SNHG28P0DPA3 235 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 CKBP12277 381 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 ZNF200P98182 395 aaPredicted RBP11.2□□□□□ -0.62
C2CD3-220ENST00000544293 PPP2R5BQ15173 497 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 LY6KQ17RY6 165 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 LRRFIP1Q32MZ4 808 aaKnown RBP11.2□□□□□ -0.62
C2CD3-220ENST00000544293 LRRC8DQ7L1W4 858 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 CAGE1Q8TC20 777 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 SCFD2Q8WU76 684 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 C17orf80Q9BSJ5 609 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 NACAP1Q9BZK3 213 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 GPCPD1Q9NPB8 672 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 GBF1Q92538 1859 aa11.2□□□□□ -0.62
C2CD3-220ENST00000544293 SCN10AQ9Y5Y9 1956 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 LRRC37A2A6NM11 1700 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 HAS3O00219 553 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 PDHBP11177 359 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 MS4A1P11836 297 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 KCNA5P22460 613 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 PDE4DQ08499 809 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 COL19A1Q14993 1142 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 CCDC96Q2M329 555 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 CNKSR3Q6P9H4 555 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 DNERQ8NFT8 737 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms