RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 STAM2O75886 525 aa13.95□□□□□ -0.18
DDX55-210ENST00000543016 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
DDX55-210ENST00000543016 IGHA2P01877 340 aa13.95□□□□□ -0.18
DDX55-210ENST00000543016 HMGCRP04035 888 aa13.95□□□□□ -0.18
DDX55-210ENST00000543016 GJB2P29033 226 aa13.95□□□□□ -0.18
DDX55-210ENST00000543016 GRK4P32298 578 aa13.95□□□□□ -0.18
DDX55-210ENST00000543016 CLK2P49760 499 aaKnown RBP13.95□□□□□ -0.18
DDX55-210ENST00000543016 CNTN2Q02246 1040 aa13.95□□□□□ -0.18
DDX55-210ENST00000543016 ARHGEF16Q5VV41 709 aa13.95□□□□□ -0.18
DDX55-210ENST00000543016 USP17L6PQ6QN14 398 aa13.95□□□□□ -0.18
DDX55-210ENST00000543016 BLIDQ8IZY5 108 aa13.95□□□□□ -0.18
DDX55-210ENST00000543016 FBXO18Q8NFZ0 1043 aa13.95□□□□□ -0.18
DDX55-210ENST00000543016 NPLOC4Q8TAT6 608 aa13.95□□□□□ -0.18
DDX55-210ENST00000543016 TINF2Q9BSI4 451 aa13.95□□□□□ -0.18
DDX55-210ENST00000543016 PLXNB2O15031 1838 aa13.94□□□□□ -0.18
DDX55-210ENST00000543016 FRMPD4Q14CM0 1322 aa13.94□□□□□ -0.18
DDX55-210ENST00000543016 SOWAHBA6NEL2 793 aa13.94□□□□□ -0.18
DDX55-210ENST00000543016 MMP1P03956 469 aa13.94□□□□□ -0.18
DDX55-210ENST00000543016 EDNRBP24530 442 aa13.94□□□□□ -0.18
DDX55-210ENST00000543016 HOXA13P31271 388 aaPredicted RBP13.94□□□□□ -0.18
DDX55-210ENST00000543016 ANP32AP39687 249 aaKnown RBP13.94□□□□□ -0.18
DDX55-210ENST00000543016 ALDH5A1P51649 535 aaPredicted RBP13.94□□□□□ -0.18
DDX55-210ENST00000543016 KRT40Q6A162 431 aa13.94□□□□□ -0.18
DDX55-210ENST00000543016 FCHSD1Q86WN1 690 aa13.94□□□□□ -0.18
DDX55-210ENST00000543016 AIFM3Q96NN9 605 aa13.94□□□□□ -0.18
DDX55-210ENST00000543016 TAAR1Q96RJ0 339 aa13.94□□□□□ -0.18
DDX55-210ENST00000543016 PXMP2Q9NR77 195 aa13.94□□□□□ -0.18
DDX55-210ENST00000543016 PTCH2Q9Y6C5 1203 aa13.94□□□□□ -0.18
DDX55-210ENST00000543016 RPTORQ8N122 1335 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 KRT2P35908 639 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 UBXN2AP68543 259 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 STXBP2Q15833 593 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 LARP1BQ659C4 914 aaKnown RBP13.93□□□□□ -0.18
DDX55-210ENST00000543016 KRT25Q7Z3Z0 450 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 FGD4Q96M96 766 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 PDCD2LQ9BRP1 358 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 ABHD16BQ9H3Z7 469 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 COL20A1Q9P218 1284 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 PCDHA6Q9UN73 950 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 CNPY2Q9Y2B0 182 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 PCDHA8Q9Y5H6 950 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 ZNFX1Q9P2E3 1918 aaKnown RBP13.93□□□□□ -0.18
DDX55-210ENST00000543016 PCNTO95613 3336 aa13.93□□□□□ -0.18
DDX55-210ENST00000543016 H3BQV1 296 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 M0R2N6 131 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 EIF3JO75822 258 aaKnown RBP13.92□□□□□ -0.18
DDX55-210ENST00000543016 NR3C2P08235 984 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 CAPN2P17655 700 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 CCND2P30279 289 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 PDE4DQ08499 809 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 NPY5RQ15761 445 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 SLC9C1Q4G0N8 1177 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 IFFO2Q5TF58 517 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 PCNX4Q63HM2 1172 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 ARMCX2Q7L311 632 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 VSIG10LQ86VR7 867 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 TRIB2Q92519 343 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 SHISA4Q96DD7 197 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 ANO3Q9BYT9 981 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 FOXP1Q9H334 677 aaPredicted RBP13.92□□□□□ -0.18
DDX55-210ENST00000543016 VTA1Q9NP79 307 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.92□□□□□ -0.18
DDX55-210ENST00000543016 BIN2Q9UBW5 565 aaPredicted RBP13.92□□□□□ -0.18
DDX55-210ENST00000543016 KCNJ14Q9UNX9 436 aa13.92□□□□□ -0.18
DDX55-210ENST00000543016 CCDC194A0A1B0GVG4 234 aa13.91□□□□□ -0.18
DDX55-210ENST00000543016 CYP3A4P08684 503 aa13.91□□□□□ -0.18
DDX55-210ENST00000543016 SREBF1P36956 1147 aa13.91□□□□□ -0.18
DDX55-210ENST00000543016 USP11P51784 963 aa13.91□□□□□ -0.18
DDX55-210ENST00000543016 PGM5Q15124 567 aa13.91□□□□□ -0.18
DDX55-210ENST00000543016 CCL14Q16627 93 aa13.91□□□□□ -0.18
DDX55-210ENST00000543016 UBE2SQ16763 222 aa13.91□□□□□ -0.18
DDX55-210ENST00000543016 MAP3K21Q5TCX8 1036 aa13.91□□□□□ -0.18
DDX55-210ENST00000543016 JAKMIP3Q5VZ66 844 aa13.91□□□□□ -0.18
DDX55-210ENST00000543016 KCNV1Q6PIU1 500 aa13.91□□□□□ -0.18
DDX55-210ENST00000543016 DIS3L2Q8IYB7 885 aaKnown RBP13.91□□□□□ -0.18
DDX55-210ENST00000543016 ARMC5Q96C12 935 aa13.91□□□□□ -0.18
DDX55-210ENST00000543016 NAP1L4Q99733 375 aaKnown RBP13.91□□□□□ -0.18
DDX55-210ENST00000543016 RBBP6Q7Z6E9 1792 aaKnown RBP13.91□□□□□ -0.18
DDX55-210ENST00000543016 ASTN1O14525 1302 aa13.9□□□□□ -0.18
DDX55-210ENST00000543016 MAFGO15525 162 aa13.9□□□□□ -0.18
DDX55-210ENST00000543016 MSCO60682 206 aa13.9□□□□□ -0.18
DDX55-210ENST00000543016 SNAI1O95863 264 aaPredicted RBP13.9□□□□□ -0.18
DDX55-210ENST00000543016 ELNP15502 786 aa13.9□□□□□ -0.18
DDX55-210ENST00000543016 EIF2AK2P19525 551 aaKnown RBP13.9□□□□□ -0.18
DDX55-210ENST00000543016 NONOQ15233 471 aaKnown RBP eCLIP13.9□□□□□ -0.18
DDX55-210ENST00000543016 GNPTABQ3T906 1256 aa13.9□□□□□ -0.18
DDX55-210ENST00000543016 CDHR1Q96JP9 859 aa13.9□□□□□ -0.18
DDX55-210ENST00000543016 PURBQ96QR8 312 aaKnown RBP13.9□□□□□ -0.18
DDX55-210ENST00000543016 FLRT1Q9NZU1 646 aa13.9□□□□□ -0.18
DDX55-210ENST00000543016 DAXXQ9UER7 740 aaPredicted RBP13.9□□□□□ -0.18
DDX55-210ENST00000543016 INHAP05111 366 aa13.89□□□□□ -0.19
DDX55-210ENST00000543016 TGFB3P10600 412 aa13.89□□□□□ -0.19
DDX55-210ENST00000543016 U2AF2P26368 475 aaKnown RBP eCLIP13.89□□□□□ -0.19
DDX55-210ENST00000543016 CYP2C19P33261 490 aa13.89□□□□□ -0.19
DDX55-210ENST00000543016 ARHGAP4P98171 946 aa13.89□□□□□ -0.19
DDX55-210ENST00000543016 ACVR2BQ13705 512 aa13.89□□□□□ -0.19
DDX55-210ENST00000543016 GNL2Q13823 731 aaKnown RBP13.89□□□□□ -0.19
DDX55-210ENST00000543016 IQSEC1Q6DN90 963 aa13.89□□□□□ -0.19
DDX55-210ENST00000543016 MOXD1Q6UVY6 613 aa13.89□□□□□ -0.19
DDX55-210ENST00000543016 NIPA1Q7RTP0 329 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms