RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 FOXP4Q8IVH2 680 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-214ENST00000540865 CLP1Q92989 425 aaKnown RBP5.68□□□□□ -1.5
SNHG1-214ENST00000540865 FERMT2Q96AC1 680 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 SNX27Q96L92 541 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 C12orf42Q96LP6 360 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 TOX2Q96NM4 488 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 NECAB3Q96P71 396 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-214ENST00000540865 PBX4Q9BYU1 374 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 DHX36Q9H2U1 1008 aaKnown RBP5.68□□□□□ -1.5
SNHG1-214ENST00000540865 TMEM39AQ9NV64 488 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 CUEDC1Q9NWM3 386 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-214ENST00000540865 ABCF2Q9UG63 623 aa5.68□□□□□ -1.5
SNHG1-214ENST00000540865 PLXNB2O15031 1838 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 SERTM1A2A2V5 107 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 EML1O00423 815 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 ERC2O15083 957 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 PQBP1O60828 265 aaKnown RBP5.67□□□□□ -1.5
SNHG1-214ENST00000540865 TIMP1P01033 207 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 IGFBP4P22692 258 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 MSX1P28360 303 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 MARSP56192 900 aaKnown RBP5.67□□□□□ -1.5
SNHG1-214ENST00000540865 PPIGQ13427 754 aaKnown RBP eCLIP5.67□□□□□ -1.5
SNHG1-214ENST00000540865 RASGRF1Q13972 1273 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 TMEM240Q5SV17 173 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 ANO1Q5XXA6 986 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 KANK3Q6NY19 840 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 CATSPERGQ6ZRH7 1159 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 RNF180Q86T96 592 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 DPP9Q86TI2 863 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 ALYREFQ86V81 257 aaKnown RBP5.67□□□□□ -1.5
SNHG1-214ENST00000540865 WDR63Q8IWG1 891 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 TEX11Q8IYF3 940 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 SLC44A5Q8NCS7 719 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 ZNF384Q8TF68 577 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.67□□□□□ -1.51e-17■■■□□ 16.6
SNHG1-214ENST00000540865 C2orf49Q9BVC5 232 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-214ENST00000540865 EPHX3Q9H6B9 360 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 SLC5A4Q9NY91 659 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 NRBP1Q9UHY1 535 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 MSRAQ9UJ68 235 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 ZBTB21Q9ULJ3 1066 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 LOC285556D6RIA3 1793 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 MAST2Q6P0Q8 1798 aa5.67□□□□□ -1.5
SNHG1-214ENST00000540865 DOCK1Q14185 1865 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 PTPRFP10586 1907 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 CACNA1AO00555 2505 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 CDC14CA4D256 554 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 GRXCR1A8MXD5 290 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 DCDC2CA8MYV0 355 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 RARBP10826 455 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 ATP4AP20648 1035 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 ADORA2AP29274 412 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 ADORA1P30542 326 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 IL15P40933 162 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-214ENST00000540865 USP14P54578 494 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 FAAP100Q0VG06 881 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 FAM47AQ5JRC9 791 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 WDR44Q5JSH3 913 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 MFSD5Q6N075 450 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 PHLDB3Q6NSJ2 640 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 PSRC1Q6PGN9 363 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-214ENST00000540865 RIPOR1Q6ZS17 1223 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 C16orf59Q7L2K0 433 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 ABRAQ8N0Z2 381 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 SHCBP1Q8NEM2 672 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 NANOS1Q8WY41 292 aaKnown RBP5.66□□□□□ -1.5
SNHG1-214ENST00000540865 HERVK_113Q902F9 699 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 NSUN4Q96CB9 384 aaKnown RBP5.66□□□□□ -1.5
SNHG1-214ENST00000540865 USP44Q9H0E7 712 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 RUBCNLQ9H714 662 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 DNAJC18Q9H819 358 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 PRKRIP1Q9H875 184 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-214ENST00000540865 XPNPEP3Q9NQH7 507 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 BTBD7Q9P203 1132 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 TBX21Q9UL17 535 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 DYRK1BQ9Y463 629 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 LTBP2Q14767 1821 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 PHIPQ8WWQ0 1821 aa5.66□□□□□ -1.5
SNHG1-214ENST00000540865 A0A1B0GTH6 734 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 A0A1W2PQ45 241 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-214ENST00000540865 A0A1W2PQY0 241 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 ADAM23O75077 832 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 COBLO75128 1261 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 BAG3O95817 575 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 THBS1P07996 1170 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 VCAM1P19320 739 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 POU3F3P20264 500 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-214ENST00000540865 KCNQ1P51787 676 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 TFF2Q03403 129 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 DDX10Q13206 875 aaKnown RBP5.65□□□□□ -1.5
SNHG1-214ENST00000540865 MVPQ14764 893 aaKnown RBP5.65□□□□□ -1.5
SNHG1-214ENST00000540865 NAA30Q147X3 362 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-214ENST00000540865 PRAMEF19Q5SWL8 479 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 ATF7IPQ6VMQ6 1270 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 ZNF365Q70YC5 407 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 CRACR2BQ8N4Y2 399 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-214ENST00000540865 TMEM199Q8N511 208 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 SH3RF3Q8TEJ3 882 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-214ENST00000540865 NUP133Q8WUM0 1156 aa5.65□□□□□ -1.5
SNHG1-214ENST00000540865 FEZ1Q99689 392 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms