RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SHHQ15465 462 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 TKFCQ3LXA3 575 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 HEATR3Q7Z4Q2 680 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 CHST13Q8NET6 341 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 PURBQ96QR8 312 aaKnown RBP19.25■□□□□ 0.67
UBC-208ENST00000540700 SEMA6BQ9H3T3 888 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 MROH8Q9H579 483 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 ACAD9Q9H845 621 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 A1CFQ9NQ94 594 aaKnown RBP19.25■□□□□ 0.67
UBC-208ENST00000540700 PRDM5Q9NQX1 630 aaPredicted RBP19.25■□□□□ 0.67
UBC-208ENST00000540700 GJB4Q9NTQ9 266 aa19.25■□□□□ 0.67
UBC-208ENST00000540700 MYCNP04198 464 aaPredicted RBP19.24■□□□□ 0.67
UBC-208ENST00000540700 C9orf50Q5SZB4 431 aa19.24■□□□□ 0.67
UBC-208ENST00000540700 GJC2Q5T442 439 aaPredicted RBP19.24■□□□□ 0.67
UBC-208ENST00000540700 SLC30A10Q6XR72 485 aa19.24■□□□□ 0.67
UBC-208ENST00000540700 MYLIPQ8WY64 445 aa19.24■□□□□ 0.67
UBC-208ENST00000540700 FGD4Q96M96 766 aa19.24■□□□□ 0.67
UBC-208ENST00000540700 BARHL2Q9NY43 387 aa19.24■□□□□ 0.67
UBC-208ENST00000540700 ORC3Q9UBD5 711 aaPredicted RBP19.24■□□□□ 0.67
UBC-208ENST00000540700 DNM1LO00429 736 aa19.23■□□□□ 0.67
UBC-208ENST00000540700 COBLO75128 1261 aa19.23■□□□□ 0.67
UBC-208ENST00000540700 CDKL5O76039 1030 aa19.23■□□□□ 0.67
UBC-208ENST00000540700 DEXIO95424 95 aa19.23■□□□□ 0.67
UBC-208ENST00000540700 CPLX2Q6PUV4 134 aaKnown RBP19.23■□□□□ 0.67
UBC-208ENST00000540700 MMP19Q99542 508 aa19.23■□□□□ 0.67
UBC-208ENST00000540700 VPS54Q9P1Q0 977 aa19.23■□□□□ 0.67
UBC-208ENST00000540700 COL20A1Q9P218 1284 aa19.23■□□□□ 0.67
UBC-208ENST00000540700 IVNS1ABPQ9Y6Y0 642 aa19.23■□□□□ 0.67
UBC-208ENST00000540700 ASTN1O14525 1302 aa19.23■□□□□ 0.67
UBC-208ENST00000540700 LCTP09848 1927 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 MYH6P13533 1939 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 SLC15A5A6NIM6 579 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 MSCO60682 206 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 PGK2P07205 417 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 ADORA2AP29274 412 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 COPB2P35606 906 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 ANO1Q5XXA6 986 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 TRIM22Q8IYM9 498 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 TRPV1Q8NER1 839 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 NPLOC4Q8TAT6 608 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 LLPHQ9BRT6 129 aaKnown RBP19.22■□□□□ 0.67
UBC-208ENST00000540700 TSHZ2Q9NRE2 1034 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 CYP39A1Q9NYL5 469 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 MRPL11Q9Y3B7 192 aaKnown RBP19.22■□□□□ 0.67
UBC-208ENST00000540700 ZNF236Q9UL36 1845 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 CDH23Q9H251 3354 aa19.22■□□□□ 0.67
UBC-208ENST00000540700 DNAJC25-GNG10A0A024R161 153 aa19.21■□□□□ 0.67
UBC-208ENST00000540700 RPS6P62753 249 aaKnown RBP19.21■□□□□ 0.67
UBC-208ENST00000540700 AKAP17AQ02040 695 aaKnown RBP19.21■□□□□ 0.67
UBC-208ENST00000540700 GHRHRQ02643 423 aa19.21■□□□□ 0.67
UBC-208ENST00000540700 BAATQ14032 418 aaPredicted RBP19.21■□□□□ 0.67
UBC-208ENST00000540700 NPY5RQ15761 445 aa19.21■□□□□ 0.67
UBC-208ENST00000540700 NSMFQ6X4W1 530 aa19.21■□□□□ 0.67
UBC-208ENST00000540700 HSCBQ8IWL3 235 aa19.21■□□□□ 0.67
UBC-208ENST00000540700 BADQ92934 168 aa19.21■□□□□ 0.67
UBC-208ENST00000540700 PRDM6Q9NQX0 595 aa19.21■□□□□ 0.67
UBC-208ENST00000540700 FBXO40Q9UH90 709 aa19.21■□□□□ 0.67
UBC-208ENST00000540700 DDX49Q9Y6V7 483 aaKnown RBP19.21■□□□□ 0.67
UBC-208ENST00000540700 MEIS2O14770 477 aa19.2■□□□□ 0.66
UBC-208ENST00000540700 FCER1AP12319 257 aa19.2■□□□□ 0.66
UBC-208ENST00000540700 HSD17B4P51659 736 aa19.2■□□□□ 0.66
UBC-208ENST00000540700 FOSBP53539 338 aa19.2■□□□□ 0.66
UBC-208ENST00000540700 NAPAP54920 295 aa19.2■□□□□ 0.66
UBC-208ENST00000540700 CNTN2Q02246 1040 aa19.2■□□□□ 0.66
UBC-208ENST00000540700 ABRAQ8N0Z2 381 aa19.2■□□□□ 0.66
UBC-208ENST00000540700 TTYH1Q9H313 450 aaPredicted RBP19.2■□□□□ 0.66
UBC-208ENST00000540700 FOXD4L1Q9NU39 408 aa19.2■□□□□ 0.66
UBC-208ENST00000540700 PNMA2Q9UL42 364 aa19.2■□□□□ 0.66
UBC-208ENST00000540700 SOWAHBA6NEL2 793 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 KBTBD13C9JR72 458 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 FOSL2P15408 326 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 HOXA13P31271 388 aaPredicted RBP19.19■□□□□ 0.66
UBC-208ENST00000540700 UBE2SQ16763 222 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 ZNF792Q3KQV3 632 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 TRIM60Q495X7 471 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 PPP1R18Q6NYC8 613 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 USP17L6PQ6QN14 398 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 SLC39A5Q6ZMH5 540 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 ANKRD35Q8N283 1001 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 FAM133AQ8N9E0 248 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 RGS22Q8NE09 1264 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 SYTL5Q8TDW5 730 aaPredicted RBP19.19■□□□□ 0.66
UBC-208ENST00000540700 ALG1Q9BT22 464 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 KCNJ14Q9UNX9 436 aa19.19■□□□□ 0.66
UBC-208ENST00000540700 hCG_1984214I3L0E3 225 aa19.18■□□□□ 0.66
UBC-208ENST00000540700 STRNO43815 780 aa19.18■□□□□ 0.66
UBC-208ENST00000540700 CFBP00751 764 aa19.18■□□□□ 0.66
UBC-208ENST00000540700 HOXC6P09630 235 aa19.18■□□□□ 0.66
UBC-208ENST00000540700 CYBAP13498 195 aa19.18■□□□□ 0.66
UBC-208ENST00000540700 GJB2P29033 226 aa19.18■□□□□ 0.66
UBC-208ENST00000540700 KCTD2Q14681 263 aa19.18■□□□□ 0.66
UBC-208ENST00000540700 RNF207Q6ZRF8 634 aa19.18■□□□□ 0.66
UBC-208ENST00000540700 DPP9Q86TI2 863 aa19.18■□□□□ 0.66
UBC-208ENST00000540700 ZNF713Q8N859 430 aaPredicted RBP19.18■□□□□ 0.66
UBC-208ENST00000540700 ARRDC4Q8NCT1 418 aa19.18■□□□□ 0.66
UBC-208ENST00000540700 FERMT2Q96AC1 680 aa19.18■□□□□ 0.66
UBC-208ENST00000540700 SMCO2A6NFE2 343 aa19.17■□□□□ 0.66
UBC-208ENST00000540700 IGHA2P01877 340 aa19.17■□□□□ 0.66
UBC-208ENST00000540700 CALML3P27482 149 aa19.17■□□□□ 0.66
UBC-208ENST00000540700 SH3RF1Q7Z6J0 888 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms