RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 IWS1Q96ST2 819 aa17.14■□□□□ 0.33
MDM1-210ENST00000540418 C6orf50Q9HD87 102 aa17.14■□□□□ 0.33
MDM1-210ENST00000540418 VPS54Q9P1Q0 977 aa17.14■□□□□ 0.33
MDM1-210ENST00000540418 CNPY2Q9Y2B0 182 aa17.14■□□□□ 0.33
MDM1-210ENST00000540418 MYCP01106 439 aaPredicted RBP17.14■□□□□ 0.33
MDM1-210ENST00000540418 CCL5P13501 91 aa17.14■□□□□ 0.33
MDM1-210ENST00000540418 AIFM3Q96NN9 605 aa17.14■□□□□ 0.33
MDM1-210ENST00000540418 PXMP2Q9NR77 195 aa17.14■□□□□ 0.33
MDM1-210ENST00000540418 CYBAP13498 195 aa17.13■□□□□ 0.33
MDM1-210ENST00000540418 EDNRBP24530 442 aa17.13■□□□□ 0.33
MDM1-210ENST00000540418 GNA11P29992 359 aa17.13■□□□□ 0.33
MDM1-210ENST00000540418 UNC93B1Q9H1C4 597 aa17.13■□□□□ 0.33
MDM1-210ENST00000540418 ABHD16BQ9H3Z7 469 aa17.13■□□□□ 0.33
MDM1-210ENST00000540418 PDE4DQ08499 809 aa17.13■□□□□ 0.33
MDM1-210ENST00000540418 UBE2SQ16763 222 aa17.13■□□□□ 0.33
MDM1-210ENST00000540418 TRPV1Q8NER1 839 aa17.13■□□□□ 0.33
MDM1-210ENST00000540418 SHISA4Q96DD7 197 aa17.13■□□□□ 0.33
MDM1-210ENST00000540418 RNF208Q9H0X6 261 aa17.13■□□□□ 0.33
MDM1-210ENST00000540418 PLXNA1Q9UIW2 1896 aa17.12■□□□□ 0.33
MDM1-210ENST00000540418 XBP1P17861 261 aa17.12■□□□□ 0.33
MDM1-210ENST00000540418 EIF2AK2P19525 551 aaKnown RBP17.12■□□□□ 0.33
MDM1-210ENST00000540418 CCND3P30281 292 aaPredicted RBP17.12■□□□□ 0.33
MDM1-210ENST00000540418 NLRP5P59047 1200 aa17.12■□□□□ 0.33
MDM1-210ENST00000540418 ACVR2BQ13705 512 aa17.12■□□□□ 0.33
MDM1-210ENST00000540418 ALG1Q9BT22 464 aa17.12■□□□□ 0.33
MDM1-210ENST00000540418 DDX49Q9Y6V7 483 aaKnown RBP17.12■□□□□ 0.33
MDM1-210ENST00000540418 ZNF865P0CJ78 1059 aaPredicted RBP17.12■□□□□ 0.33
MDM1-210ENST00000540418 HMGN5P82970 282 aaKnown RBP17.12■□□□□ 0.33
MDM1-210ENST00000540418 BICD2Q8TD16 824 aa17.12■□□□□ 0.33
MDM1-210ENST00000540418 SNX21Q969T3 373 aa17.12■□□□□ 0.33
MDM1-210ENST00000540418 SPDYE3A6NKU9 549 aa17.11■□□□□ 0.33
MDM1-210ENST00000540418 FOSP01100 380 aaPredicted RBP17.11■□□□□ 0.33
MDM1-210ENST00000540418 NR3C2P08235 984 aa17.11■□□□□ 0.33
MDM1-210ENST00000540418 CNGA1P29973 690 aa17.11■□□□□ 0.33
MDM1-210ENST00000540418 CLK2P49760 499 aaKnown RBP17.11■□□□□ 0.33
MDM1-210ENST00000540418 MCTP2Q6DN12 878 aa17.11■□□□□ 0.33
MDM1-210ENST00000540418 PDCD2LQ9BRP1 358 aa17.11■□□□□ 0.33
MDM1-210ENST00000540418 TMEM106CQ9BVX2 250 aa17.11■□□□□ 0.33
MDM1-210ENST00000540418 KATNBL1Q9H079 304 aa17.11■□□□□ 0.33
MDM1-210ENST00000540418 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.11■□□□□ 0.33
MDM1-210ENST00000540418 PAK6Q9NQU5 681 aaPredicted RBP17.11■□□□□ 0.33
MDM1-210ENST00000540418 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
MDM1-210ENST00000540418 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
MDM1-210ENST00000540418 RBBP6Q7Z6E9 1792 aaKnown RBP17.11■□□□□ 0.33
MDM1-210ENST00000540418 PGM5Q15124 567 aa17.11■□□□□ 0.33
MDM1-210ENST00000540418 STXBP2Q15833 593 aa17.11■□□□□ 0.33
MDM1-210ENST00000540418 GALNT17Q6IS24 598 aa17.11■□□□□ 0.33
MDM1-210ENST00000540418 FRMPD4Q14CM0 1322 aa17.1■□□□□ 0.33
MDM1-210ENST00000540418 VSIG10LQ86VR7 867 aa17.1■□□□□ 0.33
MDM1-210ENST00000540418 VTA1Q9NP79 307 aa17.1■□□□□ 0.33
MDM1-210ENST00000540418 ZHX1Q9UKY1 873 aaPredicted RBP17.1■□□□□ 0.33
MDM1-210ENST00000540418 SEPT4O43236 478 aa17.1■□□□□ 0.33
MDM1-210ENST00000540418 AP3B2Q13367 1082 aa17.1■□□□□ 0.33
MDM1-210ENST00000540418 EEPD1Q7L9B9 569 aa17.1■□□□□ 0.33
MDM1-210ENST00000540418 PHF20Q9BVI0 1012 aa17.1■□□□□ 0.33
MDM1-210ENST00000540418 TMEM260Q9NX78 707 aa17.1■□□□□ 0.33
MDM1-210ENST00000540418 PCDHA4Q9UN74 947 aa17.1■□□□□ 0.33
MDM1-210ENST00000540418 LCTP09848 1927 aa17.1■□□□□ 0.33
MDM1-210ENST00000540418 EIF3JO75822 258 aaKnown RBP17.09■□□□□ 0.33
MDM1-210ENST00000540418 GJB1P08034 283 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 REXO1Q8N1G1 1221 aaKnown RBP17.09■□□□□ 0.33
MDM1-210ENST00000540418 EHMT1Q9H9B1 1298 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 FAM184BQ9ULE4 1060 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 KCNJ14Q9UNX9 436 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 CENPFP49454 3210 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 CCDC85CA6NKD9 419 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 ADAMTS3O15072 1205 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 MYCLP12524 364 aaPredicted RBP17.09■□□□□ 0.33
MDM1-210ENST00000540418 CCND2P30279 289 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 CUL4AQ13619 759 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 TAPT1Q6NXT6 567 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 FBXO16Q8IX29 292 aaPredicted RBP17.09■□□□□ 0.33
MDM1-210ENST00000540418 FAM184AQ8NB25 1140 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 DAGLBQ8NCG7 672 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 GJB4Q9NTQ9 266 aa17.09■□□□□ 0.33
MDM1-210ENST00000540418 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.09■□□□□ 0.33
MDM1-210ENST00000540418 K7ELQ4 463 aaPredicted RBP17.08■□□□□ 0.33
MDM1-210ENST00000540418 MSCO60682 206 aa17.08■□□□□ 0.33
MDM1-210ENST00000540418 CCDC144BQ3MJ40 725 aa17.08■□□□□ 0.33
MDM1-210ENST00000540418 JAKMIP3Q5VZ66 844 aa17.08■□□□□ 0.33
MDM1-210ENST00000540418 IQSEC1Q6DN90 963 aa17.08■□□□□ 0.33
MDM1-210ENST00000540418 XRRA1Q6P2D8 792 aa17.08■□□□□ 0.33
MDM1-210ENST00000540418 BLIDQ8IZY5 108 aa17.08■□□□□ 0.33
MDM1-210ENST00000540418 IL31RAQ8NI17 732 aa17.08■□□□□ 0.33
MDM1-210ENST00000540418 DEFB118Q96PH6 123 aa17.08■□□□□ 0.33
MDM1-210ENST00000540418 DDX20Q9UHI6 824 aaKnown RBP17.08■□□□□ 0.33
MDM1-210ENST00000540418 AKR1A1P14550 325 aa17.08■□□□□ 0.32
MDM1-210ENST00000540418 TRIM29Q14134 588 aa17.08■□□□□ 0.32
MDM1-210ENST00000540418 PCNX4Q63HM2 1172 aa17.08■□□□□ 0.32
MDM1-210ENST00000540418 NPY5RQ15761 445 aa17.07■□□□□ 0.32
MDM1-210ENST00000540418 LHX8Q68G74 356 aa17.07■□□□□ 0.32
MDM1-210ENST00000540418 ANO3Q9BYT9 981 aa17.07■□□□□ 0.32
MDM1-210ENST00000540418 PDGFCQ9NRA1 345 aa17.07■□□□□ 0.32
MDM1-210ENST00000540418 RBM47A0AV96 593 aaKnown RBP17.07■□□□□ 0.32
MDM1-210ENST00000540418 STAM2O75886 525 aa17.07■□□□□ 0.32
MDM1-210ENST00000540418 SGPL1O95470 568 aa17.07■□□□□ 0.32
MDM1-210ENST00000540418 PGBD1Q96JS3 809 aa17.07■□□□□ 0.32
MDM1-210ENST00000540418 KIF3AQ9Y496 699 aa17.07■□□□□ 0.32
MDM1-210ENST00000540418 M0R2N6 131 aa17.06■□□□□ 0.32
MDM1-210ENST00000540418 CAPN2P17655 700 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms