RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SEPT2Q15019 361 aa14.72□□□□□ -0.05
UBE3B-209ENST00000539584 OSBPL9Q96SU4 736 aa14.72□□□□□ -0.05
UBE3B-209ENST00000539584 CASZ1Q86V15 1759 aa14.72□□□□□ -0.05
UBE3B-209ENST00000539584 CPP00450 1065 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 LDHCP07864 332 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 PRDX5P30044 214 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 FXR2P51116 673 aaKnown RBP eCLIP14.71□□□□□ -0.05
UBE3B-209ENST00000539584 NAPAP54920 295 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 PDIA5Q14554 519 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 DDB1Q16531 1140 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 SOGA3Q5TF21 947 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 CCDC181Q5TID7 509 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 C2CD5Q86YS7 1000 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 CELF1Q92879 486 aaKnown RBP14.71□□□□□ -0.05
UBE3B-209ENST00000539584 NLRP3Q96P20 1036 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 STIM2Q9P246 746 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 ARHGAP20Q9P2F6 1191 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 ZNF831Q5JPB2 1677 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 A0A087WUV0 522 aaPredicted RBP14.71□□□□□ -0.05
UBE3B-209ENST00000539584 RBAK-RBAKDNI3L0D1 243 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 ZNF263O14978 683 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 AKR1B10O60218 316 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 CYP27A1Q02318 531 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 TMEM266Q2M3C6 531 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 KIAA0895Q8NCT3 520 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.71□□□□□ -0.05
UBE3B-209ENST00000539584 RRP36Q96EU6 259 aaKnown RBP14.71□□□□□ -0.05
UBE3B-209ENST00000539584 NOX5Q96PH1 765 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 TSG101Q99816 390 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 SEMA6BQ9H3T3 888 aa14.71□□□□□ -0.05
UBE3B-209ENST00000539584 CCDC88AQ3V6T2 1871 aa14.71□□□□□ -0.06
UBE3B-209ENST00000539584 SMCO2A6NFE2 343 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 KLRF2D3W0D1 207 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 ZNF185O15231 689 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 USP17L8P0C7I0 530 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 LETM2Q2VYF4 491 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 CFAP221Q4G0U5 840 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 RUFY1Q96T51 708 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 TMEM47Q9BQJ4 181 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 RNF216Q9NWF9 866 aaPredicted RBP14.7□□□□□ -0.06
UBE3B-209ENST00000539584 SEC63Q9UGP8 760 aaKnown RBP14.7□□□□□ -0.06
UBE3B-209ENST00000539584 DUSP10Q9Y6W6 482 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 MAGEA1P43355 309 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 KLK7P49862 253 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 SKOR1P84550 965 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 C2orf54Q08AI8 447 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 TTC31Q49AM3 519 aaPredicted RBP14.7□□□□□ -0.06
UBE3B-209ENST00000539584 SPATS2Q86XZ4 545 aaKnown RBP14.7□□□□□ -0.06
UBE3B-209ENST00000539584 C1orf131Q8NDD1 294 aaKnown RBP14.7□□□□□ -0.06
UBE3B-209ENST00000539584 LRRC15Q8TF66 581 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 CAPS2Q9BXY5 557 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 TFR2Q9UP52 801 aa14.7□□□□□ -0.06
UBE3B-209ENST00000539584 COL4A1P02462 1669 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 GRID2IPA4D2P6 1211 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 EBAG9O00559 213 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 HSF2BPO75031 334 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 GNA14O95837 355 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 LDHBP07195 334 aaKnown RBP14.69□□□□□ -0.06
UBE3B-209ENST00000539584 MYBL2P10244 700 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 FCER1AP12319 257 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 EIF4A3P38919 411 aaKnown RBP14.69□□□□□ -0.06
UBE3B-209ENST00000539584 IRAK1P51617 712 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 ASTE1Q2TB18 679 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-209ENST00000539584 SND1Q7KZF4 910 aaKnown RBP eCLIP14.69□□□□□ -0.06
UBE3B-209ENST00000539584 IFT20Q8IY31 132 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 EIF1ADQ8N9N8 165 aaKnown RBP14.69□□□□□ -0.06
UBE3B-209ENST00000539584 LARP4BQ92615 738 aaKnown RBP14.69□□□□□ -0.06
UBE3B-209ENST00000539584 CDK5RAP3Q96JB5 506 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 PLIN2Q99541 437 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 LRRC1Q9BTT6 524 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 MMTAG2Q9BU76 263 aaKnown RBP14.69□□□□□ -0.06
UBE3B-209ENST00000539584 CAPN6Q9Y6Q1 641 aa14.69□□□□□ -0.06
UBE3B-209ENST00000539584 ATXN2Q99700 1313 aaKnown RBP14.69□□□□□ -0.06
UBE3B-209ENST00000539584 SHTN1A0MZ66 631 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 SLC26A4O43511 780 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 TECP42680 631 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 EVX2Q03828 476 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 SLC35G1Q2M3R5 365 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 EMC10Q5UCC4 262 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 FOXR1Q6PIV2 292 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 C3orf67Q6ZVT6 689 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 REXO1Q8N1G1 1221 aaKnown RBP14.68□□□□□ -0.06
UBE3B-209ENST00000539584 MTMR9Q96QG7 549 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 MMRN2Q9H8L6 949 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 STX8Q9UNK0 236 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 MYH14Q7Z406 1995 aaKnown RBP14.68□□□□□ -0.06
UBE3B-209ENST00000539584 EIF3HO15372 352 aaKnown RBP eCLIP14.68□□□□□ -0.06
UBE3B-209ENST00000539584 SLC9C1Q4G0N8 1177 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 C8orf74Q6P047 294 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 PDXDC1Q6P996 788 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 CACNA2D4Q7Z3S7 1137 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 KRT26Q7Z3Y9 468 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 NEDD1Q8NHV4 660 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 BAP1Q92560 729 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 CEP72Q9P209 647 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 LEMD3Q9Y2U8 911 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 ROBO1Q9Y6N7 1651 aa14.68□□□□□ -0.06
UBE3B-209ENST00000539584 MYH1P12882 1939 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 KAT6BQ8WYB5 2073 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 USP17L3A6NCW0 530 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms