RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 SV2BQ7L1I2 683 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 C2CD5Q86YS7 1000 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 ZNF444Q8N0Y2 327 aaPredicted RBP10.74□□□□□ -0.69
CDH13-204ENST00000539548 SMCR8Q8TEV9 937 aaPredicted RBP10.74□□□□□ -0.69
CDH13-204ENST00000539548 CALML4Q96GE6 196 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 OSBPL9Q96SU4 736 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 SH3GL2Q99962 352 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 TMEM47Q9BQJ4 181 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 MLXIPQ9HAP2 919 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 C6orf50Q9HD87 102 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 GOLGA6AQ9NYA3 693 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 DMGDHQ9UI17 866 aaKnown RBP10.74□□□□□ -0.69
CDH13-204ENST00000539548 HYOU1Q9Y4L1 999 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 CAPN6Q9Y6Q1 641 aa10.74□□□□□ -0.69
CDH13-204ENST00000539548 COL5A3P25940 1745 aaPredicted RBP10.74□□□□□ -0.69
CDH13-204ENST00000539548 VGLL3A8MV65 326 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 KLRF2D3W0D1 207 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 GOLGA8KD6RF30 607 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 OPA1O60313 960 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 MOCS3O95396 460 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 SMARCA1P28370 1054 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 TNFRSF8P28908 595 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 GNA11P29992 359 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 TECP42680 631 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 NOP2P46087 812 aaKnown RBP10.73□□□□□ -0.69
CDH13-204ENST00000539548 IRAK1P51617 712 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 NAPAP54920 295 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 SF3B2Q13435 895 aaKnown RBP10.73□□□□□ -0.69
CDH13-204ENST00000539548 ALS2CLQ60I27 953 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 GBP6Q6ZN66 633 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 ARHGAP27Q6ZUM4 889 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 SND1Q7KZF4 910 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDH13-204ENST00000539548 NEK8Q86SG6 692 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 DZIP1Q86YF9 867 aaKnown RBP10.73□□□□□ -0.69
CDH13-204ENST00000539548 CCDC155Q8N6L0 562 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 HDAC7Q8WUI4 952 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 PPM1EQ8WY54 764 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 ACSBG1Q96GR2 724 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
CDH13-204ENST00000539548 ALS2CR12Q96Q35 445 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 SLC39A2Q9NP94 309 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 SMCO2A6NFE2 343 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 EPHB6O15197 1021 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 AKR1B10O60218 316 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 EPB41P11171 864 aaKnown RBP10.73□□□□□ -0.69
CDH13-204ENST00000539548 MAGEA1P43355 309 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 EPHB4P54760 987 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 PPP4CP60510 307 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 EZH2Q15910 746 aaKnown RBP10.73□□□□□ -0.69
CDH13-204ENST00000539548 DDB1Q16531 1140 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 ASTE1Q2TB18 679 aaPredicted RBP10.73□□□□□ -0.69
CDH13-204ENST00000539548 SLC4A8Q2Y0W8 1093 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 GLE1Q53GS7 698 aaKnown RBP10.73□□□□□ -0.69
CDH13-204ENST00000539548 EMBQ6PCB8 327 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 FOXR2Q6PJQ5 311 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 UNC13DQ70J99 1090 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 GUF1Q8N442 669 aaKnown RBP10.73□□□□□ -0.69
CDH13-204ENST00000539548 RNF10Q8N5U6 811 aaKnown RBP10.73□□□□□ -0.69
CDH13-204ENST00000539548 FAM107BQ9H098 131 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 BLOC1S4Q9NUP1 217 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 STK17AQ9UEE5 414 aa10.73□□□□□ -0.69
CDH13-204ENST00000539548 IRS2Q9Y4H2 1338 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 A0A0G2JS52 829 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 LRRC63Q05C16 580 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 GRB10Q13322 594 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 MAPK8IP2Q13387 824 aaPredicted RBP10.72□□□□□ -0.69
CDH13-204ENST00000539548 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.72□□□□□ -0.69
CDH13-204ENST00000539548 EFCAB13Q8IY85 973 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 SH3RF3Q8TEJ3 882 aaPredicted RBP10.72□□□□□ -0.69
CDH13-204ENST00000539548 BAP1Q92560 729 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 HPS3Q969F9 1004 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 CAVIN3Q969G5 261 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 DEF6Q9H4E7 631 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 MMRN2Q9H8L6 949 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 SSU72P8A0A1W2PR75 194 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 MYMKA6NI61 221 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 LRRC53A6NM62 1247 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 A6NNZ2 444 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 RASA1P20936 1047 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 PAFAH1B1P43034 410 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 GSTO1P78417 241 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 PSMD2Q13200 908 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 NNTQ13423 1086 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 TUBB8Q3ZCM7 444 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 TTC31Q49AM3 519 aaPredicted RBP10.72□□□□□ -0.69
CDH13-204ENST00000539548 CCDC181Q5TID7 509 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 HAUS3Q68CZ6 603 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 NFRKBQ6P4R8 1299 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 PDXDC1Q6P996 788 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 RRAGAQ7L523 313 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 MARCH10Q8NA82 808 aaPredicted RBP10.72□□□□□ -0.69
CDH13-204ENST00000539548 RRP36Q96EU6 259 aaKnown RBP10.72□□□□□ -0.69
CDH13-204ENST00000539548 NLRP3Q96P20 1036 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 MTMR9Q96QG7 549 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 CAPS2Q9BXY5 557 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 PLEKHA4Q9H4M7 779 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 FAM207AQ9NSI2 230 aaPredicted RBP10.72□□□□□ -0.69
CDH13-204ENST00000539548 STIM2Q9P246 746 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 RNF14Q9UBS8 474 aa10.72□□□□□ -0.69
CDH13-204ENST00000539548 TSKSQ9UJT2 592 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms