RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 TMEM119Q4V9L6 283 aa25.52■■□□□ 1.68
HMGA2-206ENST00000536545 SAMD7Q7Z3H4 446 aa25.52■■□□□ 1.68
HMGA2-206ENST00000536545 CHURC1Q8WUH1 139 aa25.52■■□□□ 1.68
HMGA2-206ENST00000536545 BLOC1S4Q9NUP1 217 aa25.52■■□□□ 1.68
HMGA2-206ENST00000536545 GJA3Q9Y6H8 435 aa25.52■■□□□ 1.68
HMGA2-206ENST00000536545 PAK1Q13153 545 aa25.51■■□□□ 1.67
HMGA2-206ENST00000536545 DHX8Q14562 1220 aaKnown RBP25.51■■□□□ 1.67
HMGA2-206ENST00000536545 CCDC84Q86UT8 332 aaPredicted RBP25.51■■□□□ 1.67
HMGA2-206ENST00000536545 FAM160B2Q86V87 743 aa25.51■■□□□ 1.67
HMGA2-206ENST00000536545 CNOT7Q9UIV1 285 aaKnown RBP25.51■■□□□ 1.67
HMGA2-206ENST00000536545 ZYXQ15942 572 aaKnown RBP25.51■■□□□ 1.67
HMGA2-206ENST00000536545 KIF4BQ2VIQ3 1234 aa25.51■■□□□ 1.67
HMGA2-206ENST00000536545 TBC1D10BQ4KMP7 808 aaPredicted RBP25.51■■□□□ 1.67
HMGA2-206ENST00000536545 ARMCX5Q6P1M9 558 aa25.51■■□□□ 1.67
HMGA2-206ENST00000536545 APTXQ7Z2E3 356 aaKnown RBP25.51■■□□□ 1.67
HMGA2-206ENST00000536545 SNX29Q8TEQ0 813 aa25.51■■□□□ 1.67
HMGA2-206ENST00000536545 CDK11BP21127 795 aaKnown RBP25.5■■□□□ 1.67
HMGA2-206ENST00000536545 ADSSL1Q8N142 457 aa25.5■■□□□ 1.67
HMGA2-206ENST00000536545 HACL1Q9UJ83 578 aa25.5■■□□□ 1.67
HMGA2-206ENST00000536545 FEM1BQ9UK73 627 aa25.5■■□□□ 1.67
HMGA2-206ENST00000536545 SPDYE3A6NKU9 549 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 PRCPP42785 496 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 KRT79Q5XKE5 535 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 GIMAP8Q8ND71 665 aaPredicted RBP25.49■■□□□ 1.67
HMGA2-206ENST00000536545 NELFBQ8WX92 580 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 UPF1Q92900 1129 aaKnown RBP eCLIP25.49■■□□□ 1.67
HMGA2-206ENST00000536545 KIFC2Q96AC6 838 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 NUDT12Q9BQG2 462 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 ZNF341Q9BYN7 854 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 GINM1Q9NU53 330 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 A0A1B0GTH6 734 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 AMPD3Q01432 767 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 Q4G0T1 1027 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 GJA10Q969M2 543 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 CDK5RAP3Q96JB5 506 aa25.49■■□□□ 1.67
HMGA2-206ENST00000536545 SMCHD1A6NHR9 2005 aa25.48■■□□□ 1.67
HMGA2-206ENST00000536545 SKILP12757 684 aa25.48■■□□□ 1.67
HMGA2-206ENST00000536545 ETNPPLQ8TBG4 499 aa25.48■■□□□ 1.67
HMGA2-206ENST00000536545 RAD54LQ92698 747 aa25.48■■□□□ 1.67
HMGA2-206ENST00000536545 LENG9Q96B70 501 aa25.48■■□□□ 1.67
HMGA2-206ENST00000536545 SFPQP23246 707 aaKnown RBP eCLIP25.47■■□□□ 1.674e-8■■□□□ 11.9
HMGA2-206ENST00000536545 HOXA13P31271 388 aaPredicted RBP25.47■■□□□ 1.67
HMGA2-206ENST00000536545 CIITAP33076 1130 aa25.47■■□□□ 1.67
HMGA2-206ENST00000536545 ASIC1P78348 528 aa25.47■■□□□ 1.67
HMGA2-206ENST00000536545 HYIQ5T013 277 aa25.47■■□□□ 1.67
HMGA2-206ENST00000536545 CCDC174Q6PII3 467 aa25.47■■□□□ 1.67
HMGA2-206ENST00000536545 LARP4BQ92615 738 aaKnown RBP25.47■■□□□ 1.67
HMGA2-206ENST00000536545 FEZ1Q99689 392 aa25.47■■□□□ 1.67
HMGA2-206ENST00000536545 PCDHA12Q9UN75 941 aa25.47■■□□□ 1.67
HMGA2-206ENST00000536545 DOCK1Q14185 1865 aa25.47■■□□□ 1.67
HMGA2-206ENST00000536545 SLC26A4O43511 780 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 SV2BQ7L1I2 683 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 DEFB129Q9H1M3 183 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 EXOC1Q9NV70 894 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 FBXO28Q9NVF7 368 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 KDM3AQ9Y4C1 1321 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 TBX3O15119 743 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 MARCH6O60337 910 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 CTNND1O60716 968 aaKnown RBP25.46■■□□□ 1.67
HMGA2-206ENST00000536545 CYP3A4P08684 503 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 MCM6Q14566 821 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 KCNK18Q7Z418 384 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 SLFN12Q8IYM2 578 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 CCDC47Q96A33 483 aaKnown RBP25.46■■□□□ 1.67
HMGA2-206ENST00000536545 KIAA1683Q9H0B3 1180 aa25.46■■□□□ 1.67
HMGA2-206ENST00000536545 TBX2Q13207 712 aaPredicted RBP25.45■■□□□ 1.66
HMGA2-206ENST00000536545 NR1I3Q14994 352 aa25.45■■□□□ 1.66
HMGA2-206ENST00000536545 ECM1Q16610 540 aa25.45■■□□□ 1.66
HMGA2-206ENST00000536545 CNNM4Q6P4Q7 775 aa25.45■■□□□ 1.66
HMGA2-206ENST00000536545 GTPBP4Q9BZE4 634 aaKnown RBP25.45■■□□□ 1.66
HMGA2-206ENST00000536545 DICER1Q9UPY3 1922 aaKnown RBP25.44■■□□□ 1.66
HMGA2-206ENST00000536545 FAM86B1E9PN63 330 aa25.44■■□□□ 1.66
HMGA2-206ENST00000536545 WDR46O15213 610 aaKnown RBP25.44■■□□□ 1.66
HMGA2-206ENST00000536545 COBLO75128 1261 aa25.44■■□□□ 1.66
HMGA2-206ENST00000536545 FAM86B2P0C5J1 330 aa25.44■■□□□ 1.66
HMGA2-206ENST00000536545 PRR16Q569H4 304 aa25.44■■□□□ 1.66
HMGA2-206ENST00000536545 LPAR1Q92633 364 aa25.44■■□□□ 1.66
HMGA2-206ENST00000536545 ADD3Q9UEY8 706 aaKnown RBP25.44■■□□□ 1.66
HMGA2-206ENST00000536545 MAPK8IP1Q9UQF2 711 aa25.44■■□□□ 1.66
HMGA2-206ENST00000536545 ABCB11O95342 1321 aa25.44■■□□□ 1.66
HMGA2-206ENST00000536545 MYMKA6NI61 221 aa25.44■■□□□ 1.66
HMGA2-206ENST00000536545 SPIRE1Q08AE8 756 aa25.44■■□□□ 1.66
HMGA2-206ENST00000536545 STIM1Q13586 685 aa25.44■■□□□ 1.66
HMGA2-206ENST00000536545 PTPN21Q16825 1174 aa25.44■■□□□ 1.66
HMGA2-206ENST00000536545 TPD52L1Q16890 204 aaPredicted RBP25.44■■□□□ 1.66
HMGA2-206ENST00000536545 MRPL11Q9Y3B7 192 aaKnown RBP25.44■■□□□ 1.66
HMGA2-206ENST00000536545 INPP5BP32019 993 aa25.43■■□□□ 1.66
HMGA2-206ENST00000536545 PDE4DQ08499 809 aa25.43■■□□□ 1.66
HMGA2-206ENST00000536545 COBLL1Q53SF7 1204 aa25.43■■□□□ 1.66
HMGA2-206ENST00000536545 NBPF12Q5TAG4 269 aaPredicted RBP25.43■■□□□ 1.66
HMGA2-206ENST00000536545 CTAGE1Q96RT6 745 aa25.43■■□□□ 1.66
HMGA2-206ENST00000536545 LIMA1Q9UHB6 759 aaKnown RBP25.43■■□□□ 1.66
HMGA2-206ENST00000536545 GCOM1H8Y6P7 765 aaPredicted RBP25.42■■□□□ 1.66
HMGA2-206ENST00000536545 PSMA7O14818 248 aa25.42■■□□□ 1.66
HMGA2-206ENST00000536545 POLR2MP0CAP2 368 aa25.42■■□□□ 1.66
HMGA2-206ENST00000536545 SPECC1LQ69YQ0 1117 aa25.42■■□□□ 1.66
HMGA2-206ENST00000536545 PVALEFA0A1B0GWK0 134 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 CCT6AP40227 531 aaKnown RBP25.41■■□□□ 1.66
HMGA2-206ENST00000536545 PMS1P54277 932 aaKnown RBP25.41■■□□□ 1.66
HMGA2-206ENST00000536545 SPAG1Q07617 926 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms