RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ZKSCAN8Q15776 578 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-216ENST00000534765 HHIPL2Q6UWX4 724 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 TMC4Q7Z404 712 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 NEDD1Q8NHV4 660 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 TEKT1Q969V4 418 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 RNF26Q9BY78 433 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-216ENST00000534765 FUT8Q9BYC5 575 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 VAT1LQ9HCJ6 419 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 PGAP2Q9UHJ9 254 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 BAIAP2L1Q9UHR4 511 aa10.08□□□□□ -0.8
SF3B2-216ENST00000534765 TCP10L2B9ZVM9 353 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 ZMYND10O75800 440 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 PDHBP11177 359 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 CCNHP51946 323 aaPredicted RBP10.07□□□□□ -0.8
SF3B2-216ENST00000534765 GRM4Q14833 912 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 LONRF3Q496Y0 759 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 DYDC1Q8WWB3 177 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 EPSTI1Q96J88 318 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 TACO1Q9BSH4 297 aaKnown RBP10.07□□□□□ -0.8
SF3B2-216ENST00000534765 TMEM39BQ9GZU3 492 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 CHUKO15111 745 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 ATP8B1O43520 1251 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 GCFC2P16383 781 aaKnown RBP10.07□□□□□ -0.8
SF3B2-216ENST00000534765 ATP1A2P50993 1020 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 CXCL9Q07325 125 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 KCTD1Q719H9 257 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 ARMCX6Q7L4S7 300 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 PARD3BQ8TEW8 1205 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 SH3GL3Q99963 347 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 TMEM260Q9NX78 707 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 HPSEQ9Y251 543 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 LAMA2P24043 3122 aaKnown RBP10.07□□□□□ -0.8
SF3B2-216ENST00000534765 CDC25CP30307 473 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 CNKSR1Q969H4 720 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 CCDC97Q96F63 343 aaPredicted RBP10.07□□□□□ -0.8
SF3B2-216ENST00000534765 PIGSQ96S52 555 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 TCP11L1Q9NUJ3 509 aa10.07□□□□□ -0.8
SF3B2-216ENST00000534765 MYH7BA7E2Y1 1941 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 ATRNL1Q5VV63 1379 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 GOLGA6CA6NDK9 693 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 RBAK-RBAKDNI3L0D1 243 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 STXBP3O00186 592 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 KIF3CO14782 793 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 DDAH1O94760 285 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 GOLGA6DP0CG33 693 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 ECE1P42892 770 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 GSCP56915 257 aaPredicted RBP10.06□□□□□ -0.8
SF3B2-216ENST00000534765 PFKFB3Q16875 520 aaPredicted RBP10.06□□□□□ -0.8
SF3B2-216ENST00000534765 DGKHQ86XP1 1220 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 MED15Q96RN5 788 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 GOLGA6AQ9NYA3 693 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 PP2D1A8MPX8 630 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 PES1O00541 588 aaKnown RBP10.06□□□□□ -0.8
SF3B2-216ENST00000534765 TXLNAP40222 546 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 CASP8Q14790 479 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 ZNF174Q15697 407 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 MFSD4BQ5TF39 518 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 ADALQ6DHV7 355 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 METTL16Q86W50 562 aaKnown RBP10.06□□□□□ -0.8
SF3B2-216ENST00000534765 ZNF444Q8N0Y2 327 aaPredicted RBP10.06□□□□□ -0.8
SF3B2-216ENST00000534765 C4orf32Q8N8J7 132 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 COA7Q96BR5 231 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 HSD3B7Q9H2F3 369 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 KAT14Q9H8E8 782 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 LAMA3Q16787 3333 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 PRAMEF18Q5VWM3 479 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 MIGA2Q7L4E1 593 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 UPF1Q92900 1129 aaKnown RBP eCLIP10.06□□□□□ -0.8
SF3B2-216ENST00000534765 MTRQ99707 1265 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 MTA3Q9BTC8 594 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 EHD4Q9H223 541 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 TMEM60Q9H2L4 133 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 SERPINB13Q9UIV8 391 aa10.06□□□□□ -0.8
SF3B2-216ENST00000534765 POLR2AP24928 1970 aaKnown RBP10.06□□□□□ -0.8
SF3B2-216ENST00000534765 KLRF2D3W0D1 207 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 LDHCP07864 332 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 SCG2P13521 617 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 PNOCQ13519 176 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 SEPT2Q15019 361 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 DPCR1Q3MIW9 517 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 ZNF569Q5MCW4 686 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 PIK3AP1Q6ZUJ8 805 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 FAM71BQ8TC56 605 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 TMEM165Q9HC07 324 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 GPCPD1Q9NPB8 672 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 CFAP45Q9UL16 551 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 KIF5CO60282 957 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 BUB1BO60566 1050 aaPredicted RBP10.05□□□□□ -0.8
SF3B2-216ENST00000534765 VIL1P09327 827 aaKnown RBP10.05□□□□□ -0.8
SF3B2-216ENST00000534765 UBASH3AP57075 661 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 CSRNP2Q9H175 543 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 SUDS3Q9H7L9 328 aaPredicted RBP10.05□□□□□ -0.8
SF3B2-216ENST00000534765 ETAA1Q9NY74 926 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 CTAGE15A4D2H0 777 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 SPDYE2BA6NHP3 402 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 COBLO75128 1261 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 CTAGE8P0CG41 777 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 SPDYE6P0CI01 402 aa10.05□□□□□ -0.8
SF3B2-216ENST00000534765 MDM2Q00987 491 aaPredicted RBP10.05□□□□□ -0.8
SF3B2-216ENST00000534765 BRD3Q15059 726 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms