RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 RNF207Q6ZRF8 634 aa17.61■□□□□ 0.41
CTSB-230ENST00000534149 SPRED2Q7Z698 418 aa17.61■□□□□ 0.41
CTSB-230ENST00000534149 HERC6Q8IVU3 1022 aa17.61■□□□□ 0.41
CTSB-230ENST00000534149 PHOSPHO2Q8TCD6 241 aa17.61■□□□□ 0.41
CTSB-230ENST00000534149 TMEM47Q9BQJ4 181 aa17.61■□□□□ 0.41
CTSB-230ENST00000534149 BRWD1Q9NSI6 2320 aa17.6■□□□□ 0.41
CTSB-230ENST00000534149 A6NJR5 290 aa17.6■□□□□ 0.41
CTSB-230ENST00000534149 NKRFO15226 690 aaKnown RBP eCLIP17.6■□□□□ 0.412e-7■■□□□ 14
CTSB-230ENST00000534149 TOP1P11387 765 aaKnown RBP17.6■□□□□ 0.41
CTSB-230ENST00000534149 EDNRBP24530 442 aa17.6■□□□□ 0.41
CTSB-230ENST00000534149 CHMP4BP1P59074 171 aa17.6■□□□□ 0.41
CTSB-230ENST00000534149 RPS6P62753 249 aaKnown RBP17.6■□□□□ 0.41
CTSB-230ENST00000534149 BFSP2Q13515 415 aa17.6■□□□□ 0.41
CTSB-230ENST00000534149 RRP12Q5JTH9 1297 aaKnown RBP17.6■□□□□ 0.41
CTSB-230ENST00000534149 SCFD2Q8WU76 684 aa17.6■□□□□ 0.41
CTSB-230ENST00000534149 COG5Q9UP83 839 aa17.6■□□□□ 0.41
CTSB-230ENST00000534149 NOD1Q9Y239 953 aa17.6■□□□□ 0.41
CTSB-230ENST00000534149 KIF28PB7ZC32 967 aa17.59■□□□□ 0.41
CTSB-230ENST00000534149 KPNA6O60684 536 aa17.59■□□□□ 0.41
CTSB-230ENST00000534149 TXNP10599 105 aaKnown RBP17.59■□□□□ 0.41
CTSB-230ENST00000534149 MX1P20591 662 aa17.59■□□□□ 0.41
CTSB-230ENST00000534149 GRB10Q13322 594 aa17.59■□□□□ 0.41
CTSB-230ENST00000534149 EPHX3Q9H6B9 360 aa17.59■□□□□ 0.41
CTSB-230ENST00000534149 TLL1O43897 1013 aa17.58■□□□□ 0.4
CTSB-230ENST00000534149 ARIH2O95376 493 aa17.58■□□□□ 0.4
CTSB-230ENST00000534149 FGRP09769 529 aa17.58■□□□□ 0.4
CTSB-230ENST00000534149 PDHBP11177 359 aa17.58■□□□□ 0.4
CTSB-230ENST00000534149 PTPN11Q06124 597 aaPredicted RBP17.58■□□□□ 0.4
CTSB-230ENST00000534149 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.4
CTSB-230ENST00000534149 DNERQ8NFT8 737 aa17.58■□□□□ 0.4
CTSB-230ENST00000534149 MPHOSPH6Q99547 160 aaKnown RBP17.58■□□□□ 0.4
CTSB-230ENST00000534149 LCHNA4D1U4 455 aa17.57■□□□□ 0.4
CTSB-230ENST00000534149 LPXNO60711 386 aa17.57■□□□□ 0.4
CTSB-230ENST00000534149 BAIAP3O94812 1187 aa17.57■□□□□ 0.4
CTSB-230ENST00000534149 KCNJ6P48051 423 aa17.57■□□□□ 0.4
CTSB-230ENST00000534149 PTGISQ16647 500 aa17.57■□□□□ 0.4
CTSB-230ENST00000534149 TMCO2Q7Z6W1 182 aaPredicted RBP17.57■□□□□ 0.4
CTSB-230ENST00000534149 HLA-CQ95604 372 aa17.57■□□□□ 0.4
CTSB-230ENST00000534149 LRFN3Q9BTN0 628 aa17.57■□□□□ 0.4
CTSB-230ENST00000534149 WDR19Q8NEZ3 1342 aa17.56■□□□□ 0.4
CTSB-230ENST00000534149 WDR5P61964 334 aaKnown RBP17.56■□□□□ 0.4
CTSB-230ENST00000534149 ZNF543Q08ER8 600 aa17.56■□□□□ 0.4
CTSB-230ENST00000534149 ALX1Q15699 326 aa17.56■□□□□ 0.4
CTSB-230ENST00000534149 USH1GQ495M9 461 aa17.56■□□□□ 0.4
CTSB-230ENST00000534149 GDPD5Q8WTR4 605 aa17.56■□□□□ 0.4
CTSB-230ENST00000534149 AFG1LQ8WV93 481 aa17.56■□□□□ 0.4
CTSB-230ENST00000534149 CTAGE1Q96RT6 745 aa17.56■□□□□ 0.4
CTSB-230ENST00000534149 TCP11L1Q9NUJ3 509 aa17.56■□□□□ 0.4
CTSB-230ENST00000534149 PNMA2Q9UL42 364 aa17.56■□□□□ 0.4
CTSB-230ENST00000534149 PCDHB15Q9Y5E8 787 aa17.56■□□□□ 0.4
CTSB-230ENST00000534149 SALL3Q9BXA9 1300 aa17.55■□□□□ 0.4
CTSB-230ENST00000534149 RBAK-RBAKDNI3L0D1 243 aa17.55■□□□□ 0.4
CTSB-230ENST00000534149 FGAP02671 866 aa17.55■□□□□ 0.4
CTSB-230ENST00000534149 GPNMBQ14956 572 aa17.55■□□□□ 0.4
CTSB-230ENST00000534149 GDF6Q6KF10 455 aaPredicted RBP17.55■□□□□ 0.4
CTSB-230ENST00000534149 CCDC155Q8N6L0 562 aa17.55■□□□□ 0.4
CTSB-230ENST00000534149 CAGE1Q8TC20 777 aa17.55■□□□□ 0.4
CTSB-230ENST00000534149 AFAP1L1Q8TED9 768 aa17.55■□□□□ 0.4
CTSB-230ENST00000534149 DHX38Q92620 1227 aaKnown RBP17.55■□□□□ 0.4
CTSB-230ENST00000534149 B4DLN1 442 aa17.54■□□□□ 0.4
CTSB-230ENST00000534149 MMP3P08254 477 aa17.54■□□□□ 0.4
CTSB-230ENST00000534149 MRPL12P52815 198 aaKnown RBP17.54■□□□□ 0.4
CTSB-230ENST00000534149 HAND2P61296 217 aa17.54■□□□□ 0.4
CTSB-230ENST00000534149 DEFB103AP81534 67 aa17.54■□□□□ 0.4
CTSB-230ENST00000534149 CCDC62Q6P9F0 684 aa17.54■□□□□ 0.4
CTSB-230ENST00000534149 KHSRPQ92945 711 aaKnown RBP eCLIP17.54■□□□□ 0.4
CTSB-230ENST00000534149 FAM227BQ96M60 508 aa17.54■□□□□ 0.4
CTSB-230ENST00000534149 ZBED2Q9BTP6 218 aa17.54■□□□□ 0.4
CTSB-230ENST00000534149 CPVLQ9H3G5 476 aa17.54■□□□□ 0.4
CTSB-230ENST00000534149 HELLSQ9NRZ9 838 aa17.54■□□□□ 0.4
CTSB-230ENST00000534149 KIAA1217Q5T5P2 1943 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 A0A0D9SFI3 127 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 GOLGA8HP0CJ92 632 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 SNHG28P0DPA3 235 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 SELPP16109 830 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 LY6KQ17RY6 165 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 TCTN1Q2MV58 587 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 TMEM31Q5JXX7 168 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 SEPT14Q6ZU15 432 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 LRRC8DQ7L1W4 858 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 CHST3Q7LGC8 479 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 KAT2BQ92831 832 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 EVI5LQ96CN4 794 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 MTUS1Q9ULD2 1270 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 HCN4Q9Y3Q4 1203 aa17.53■□□□□ 0.4
CTSB-230ENST00000534149 GH1P01241 217 aa17.52■□□□□ 0.4
CTSB-230ENST00000534149 HOXD11P31277 338 aaPredicted RBP17.52■□□□□ 0.4
CTSB-230ENST00000534149 ARHGAP1Q07960 439 aa17.52■□□□□ 0.4
CTSB-230ENST00000534149 CNKSR3Q6P9H4 555 aa17.52■□□□□ 0.4
CTSB-230ENST00000534149 SESTD1Q86VW0 696 aa17.52■□□□□ 0.4
CTSB-230ENST00000534149 TBC1D5Q92609 795 aa17.52■□□□□ 0.4
CTSB-230ENST00000534149 UBA5Q9GZZ9 404 aa17.52■□□□□ 0.4
CTSB-230ENST00000534149 SIP14410 1827 aa17.51■□□□□ 0.39
CTSB-230ENST00000534149 FAM86C2PA6NEL3 165 aa17.51■□□□□ 0.39
CTSB-230ENST00000534149 NBNO60934 754 aa17.51■□□□□ 0.39
CTSB-230ENST00000534149 HSPD1P10809 573 aaKnown RBP17.51■□□□□ 0.39
CTSB-230ENST00000534149 CKBP12277 381 aa17.51■□□□□ 0.39
CTSB-230ENST00000534149 MCMDC2Q4G0Z9 681 aa17.51■□□□□ 0.39
CTSB-230ENST00000534149 ZNF589Q86UQ0 364 aaPredicted RBP17.51■□□□□ 0.39
CTSB-230ENST00000534149 TBC1D10CQ8IV04 446 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms