RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 TGS1Q96RS0 853 aaKnown RBP14.65□□□□□ -0.06
SVIP-205ENST00000533774 ZBED2Q9BTP6 218 aa14.65□□□□□ -0.06
SVIP-205ENST00000533774 PLIN4Q96Q06 1357 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 KMT2EQ8IZD2 1858 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 NBNO60934 754 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 MCCP23508 829 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 CPT1AP50416 773 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 ALDH5A1P51649 535 aaPredicted RBP14.64□□□□□ -0.07
SVIP-205ENST00000533774 BFSP2Q13515 415 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 BAATQ14032 418 aaPredicted RBP14.64□□□□□ -0.07
SVIP-205ENST00000533774 FAM117BQ6P1L5 589 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 KCTD1Q719H9 257 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 FAM160B2Q86V87 743 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 SIRT2Q8IXJ6 389 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 OSBP2Q969R2 916 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 RAD9AQ99638 391 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 C17orf80Q9BSJ5 609 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 KCNH6Q9H252 994 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 ISY1Q9ULR0 285 aaKnown RBP14.64□□□□□ -0.07
SVIP-205ENST00000533774 SYNPO2Q9UMS6 1093 aa14.64□□□□□ -0.07
SVIP-205ENST00000533774 C19orf67A6NJJ6 358 aa14.63□□□□□ -0.07
SVIP-205ENST00000533774 A6NJR5 290 aa14.63□□□□□ -0.07
SVIP-205ENST00000533774 ZP2Q05996 745 aa14.63□□□□□ -0.07
SVIP-205ENST00000533774 PTPN11Q06124 597 aaPredicted RBP14.63□□□□□ -0.07
SVIP-205ENST00000533774 HSP90AB4PQ58FF6 505 aa14.63□□□□□ -0.07
SVIP-205ENST00000533774 GDF6Q6KF10 455 aaPredicted RBP14.63□□□□□ -0.07
SVIP-205ENST00000533774 FTSJ3Q8IY81 847 aaKnown RBP14.63□□□□□ -0.07
SVIP-205ENST00000533774 ZNF444Q8N0Y2 327 aaPredicted RBP14.63□□□□□ -0.07
SVIP-205ENST00000533774 NEDD1Q8NHV4 660 aa14.63□□□□□ -0.07
SVIP-205ENST00000533774 CHURC1Q8WUH1 139 aa14.63□□□□□ -0.07
SVIP-205ENST00000533774 GMCL1Q96IK5 515 aa14.63□□□□□ -0.07
SVIP-205ENST00000533774 GPHNQ9NQX3 736 aaPredicted RBP14.63□□□□□ -0.07
SVIP-205ENST00000533774 PRR12Q9ULL5 1215 aa14.63□□□□□ -0.07
SVIP-205ENST00000533774 ZDBF2Q9HCK1 2354 aa14.63□□□□□ -0.07
SVIP-205ENST00000533774 RALGAPA2Q2PPJ7 1873 aa14.63□□□□□ -0.07
SVIP-205ENST00000533774 NFIBO00712 420 aa14.62□□□□□ -0.07
SVIP-205ENST00000533774 PLA2G6O60733 806 aa14.62□□□□□ -0.07
SVIP-205ENST00000533774 CXCL10P02778 98 aa14.62□□□□□ -0.07
SVIP-205ENST00000533774 IKQ13123 557 aaPredicted RBP14.62□□□□□ -0.07
SVIP-205ENST00000533774 PTGISQ16647 500 aa14.62□□□□□ -0.07
SVIP-205ENST00000533774 LRRFIP1Q32MZ4 808 aaKnown RBP14.62□□□□□ -0.07
SVIP-205ENST00000533774 CNKSR3Q6P9H4 555 aa14.62□□□□□ -0.07
SVIP-205ENST00000533774 GIMAP6Q6P9H5 292 aa14.62□□□□□ -0.07
SVIP-205ENST00000533774 AFAP1L1Q8TED9 768 aa14.62□□□□□ -0.07
SVIP-205ENST00000533774 CCPG1Q9ULG6 757 aa14.62□□□□□ -0.07
SVIP-205ENST00000533774 SPTBN4Q9H254 2564 aa14.62□□□□□ -0.07
SVIP-205ENST00000533774 ARIH2O95376 493 aa14.61□□□□□ -0.07
SVIP-205ENST00000533774 SELPP16109 830 aa14.61□□□□□ -0.07
SVIP-205ENST00000533774 SLC1A4P43007 532 aa14.61□□□□□ -0.07
SVIP-205ENST00000533774 CHMP4BP1P59074 171 aa14.61□□□□□ -0.07
SVIP-205ENST00000533774 TRAF7Q6Q0C0 670 aa14.61□□□□□ -0.07
SVIP-205ENST00000533774 SLC30A10Q6XR72 485 aa14.61□□□□□ -0.07
SVIP-205ENST00000533774 FBXO22Q8NEZ5 403 aa14.61□□□□□ -0.07
SVIP-205ENST00000533774 PRSS33Q8NF86 280 aa14.61□□□□□ -0.07
SVIP-205ENST00000533774 PANK1Q8TE04 598 aa14.61□□□□□ -0.07
SVIP-205ENST00000533774 IRS1P35568 1242 aa14.6□□□□□ -0.07
SVIP-205ENST00000533774 TFAP4Q01664 338 aa14.6□□□□□ -0.07
SVIP-205ENST00000533774 MBTPS1Q14703 1052 aa14.6□□□□□ -0.07
SVIP-205ENST00000533774 COL19A1Q14993 1142 aa14.6□□□□□ -0.07
SVIP-205ENST00000533774 TTBK2Q6IQ55 1244 aa14.6□□□□□ -0.07
SVIP-205ENST00000533774 RCSD1Q6JBY9 416 aa14.6□□□□□ -0.07
SVIP-205ENST00000533774 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.6□□□□□ -0.07
SVIP-205ENST00000533774 LRRC8DQ7L1W4 858 aa14.6□□□□□ -0.07
SVIP-205ENST00000533774 CAGE1Q8TC20 777 aa14.6□□□□□ -0.07
SVIP-205ENST00000533774 KAT2BQ92831 832 aa14.6□□□□□ -0.07
SVIP-205ENST00000533774 WNT8BQ93098 351 aa14.6□□□□□ -0.07
SVIP-205ENST00000533774 MRPL38Q96DV4 380 aaKnown RBP14.6□□□□□ -0.07
SVIP-205ENST00000533774 NOD1Q9Y239 953 aa14.6□□□□□ -0.07
SVIP-205ENST00000533774 ABHD14A-ACY1A0A1B0GW23 586 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 M0R2C6 588 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 NMT2O60551 498 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 ICAM1P05362 532 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 TSPY3P0CV98 308 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 TSPY8P0CW00 308 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 CKBP12277 381 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 LTBRP36941 435 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 RBL2Q08999 1139 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 PPP2R5BQ15173 497 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 PUS10Q3MIT2 529 aaKnown RBP14.59□□□□□ -0.07
SVIP-205ENST00000533774 TCEAL5Q5H9L2 206 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 IER5LQ5T953 404 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 ZSCAN25Q6NSZ9 544 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 CLEC4DQ8WXI8 215 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 INCENPQ9NQS7 918 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 IL17RBQ9NRM6 502 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 ADD3Q9UEY8 706 aaKnown RBP14.59□□□□□ -0.07
SVIP-205ENST00000533774 PLXNA3P51805 1871 aa14.59□□□□□ -0.07
SVIP-205ENST00000533774 MYH6P13533 1939 aa14.58□□□□□ -0.07
SVIP-205ENST00000533774 COL4A6Q14031 1691 aa14.58□□□□□ -0.07
SVIP-205ENST00000533774 CACNA1HO95180 2353 aa14.58□□□□□ -0.08
SVIP-205ENST00000533774 PTPDC1A2A3K4 754 aa14.58□□□□□ -0.08
SVIP-205ENST00000533774 NKRFO15226 690 aaKnown RBP eCLIP14.58□□□□□ -0.08
SVIP-205ENST00000533774 GPAA1O43292 621 aa14.58□□□□□ -0.08
SVIP-205ENST00000533774 KPNA6O60684 536 aa14.58□□□□□ -0.08
SVIP-205ENST00000533774 EDNRBP24530 442 aa14.58□□□□□ -0.08
SVIP-205ENST00000533774 SLC16A2P36021 539 aa14.58□□□□□ -0.08
SVIP-205ENST00000533774 TDO2P48775 406 aa14.58□□□□□ -0.08
SVIP-205ENST00000533774 TRIM71Q2Q1W2 868 aaKnown RBP14.58□□□□□ -0.08
SVIP-205ENST00000533774 SESTD1Q86VW0 696 aa14.58□□□□□ -0.08
SVIP-205ENST00000533774 ADHFE1Q8IWW8 467 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms