RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 PCDHA6Q9UN73 950 aa12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 KCNJ14Q9UNX9 436 aa12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 CNPY2Q9Y2B0 182 aa12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 PCDHA8Q9Y5H6 950 aa12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 BAZ2BQ9UIF8 2168 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
TRAPPC4-211ENST00000533012 SNAI1O95863 264 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 IGHA2P01877 340 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 INHAP05111 366 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 HSP90AA1P07900 732 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 GJB2P29033 226 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 PDE4DQ08499 809 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 AP3B2Q13367 1082 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 BECN1Q14457 450 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 JAKMIP3Q5VZ66 844 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 ARMCX2Q7L311 632 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 BLIDQ8IZY5 108 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 REXO1Q8N1G1 1221 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 SHISA4Q96DD7 197 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 C8orf76Q96K31 380 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 PHF20Q9BVI0 1012 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 ABHD16BQ9H3Z7 469 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 BRMS1Q9HCU9 246 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 GJB4Q9NTQ9 266 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 ASTN1O14525 1302 aa12.87□□□□□ -0.35
TRAPPC4-211ENST00000533012 NR3C2P08235 984 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 PRKAR2AP13861 404 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 EIF2AK2P19525 551 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 CLK2P49760 499 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 FOSBP53539 338 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 CACNB2Q08289 660 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 TRIM32Q13049 653 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 SAFBQ15424 915 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 STXBP2Q15833 593 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 PRAMEF19Q5SWL8 479 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 KRT40Q6A162 431 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 DAGLBQ8NCG7 672 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 MORC4Q8TE76 937 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 ARMC5Q96C12 935 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 PDCD2LQ9BRP1 358 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 HMX1Q9NP08 348 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 TMEM260Q9NX78 707 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 NRBP1Q9UHY1 535 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 RPTORQ8N122 1335 aa12.86□□□□□ -0.35
TRAPPC4-211ENST00000533012 ZSWIM8A7E2V4 1837 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 MGAMO43451 1857 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 EIF3JO75822 258 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 MYCLP12524 364 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 EDNRBP24530 442 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 CNGA1P29973 690 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 CCND2P30279 289 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 KRT2P35908 639 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 ACVR2BQ13705 512 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 PGM5Q15124 567 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 MAP3K21Q5TCX8 1036 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 LARP1BQ659C4 914 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 XRRA1Q6P2D8 792 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 EEPD1Q7L9B9 569 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 VSIG10LQ86VR7 867 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 FBXO18Q8NFZ0 1043 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 ANO3Q9BYT9 981 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 FOXD4L1Q9NU39 408 aa12.85□□□□□ -0.35
TRAPPC4-211ENST00000533012 H3BQV1 296 aa12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 STAM2O75886 525 aa12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 MYCP01106 439 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 MMP1P03956 469 aa12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 GUCY1B3Q02153 619 aa12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 RASGRP4Q8TDF6 673 aa12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 ZNF333Q96JL9 665 aa12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 PGBD1Q96JS3 809 aa12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 VTA1Q9NP79 307 aa12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 ZHX1Q9UKY1 873 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 FAM184BQ9ULE4 1060 aa12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 DDX49Q9Y6V7 483 aaKnown RBP12.84□□□□□ -0.35
TRAPPC4-211ENST00000533012 PLXNB2O15031 1838 aa12.83□□□□□ -0.35
TRAPPC4-211ENST00000533012 ZNF236Q9UL36 1845 aa12.83□□□□□ -0.35
TRAPPC4-211ENST00000533012 CCDC194A0A1B0GVG4 234 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 M0R2N6 131 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 ADAMTS3O15072 1205 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 ZNF865P0CJ78 1059 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 CYBAP13498 195 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 CCL5P13501 91 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 PDCP20941 246 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 ZNF76P36508 570 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 SREBF1P36956 1147 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 NPY5RQ15761 445 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 PCNX4Q63HM2 1172 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 IQSEC1Q6DN90 963 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 SEPT14Q6ZU15 432 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 KRT25Q7Z3Z0 450 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 DIS3L2Q8IYB7 885 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 TNS4Q8IZW8 715 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 OXER1Q8TDS5 423 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 TMEM106CQ9BVX2 250 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 RNF208Q9H0X6 261 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 RTEL1Q9NZ71 1219 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 FRMPD4Q14CM0 1322 aa12.83□□□□□ -0.36
TRAPPC4-211ENST00000533012 SMCHD1A6NHR9 2005 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms