RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	ATP11B	Q9Y2G3	1177 aa		9.47	□□□□□ -0.89
PUM1-223	ENST00000532678	MCM3AP	O60318	1980 aa		9.46	□□□□□ -0.89
PUM1-223	ENST00000532678	SMCHD1	A6NHR9	2005 aa		9.46	□□□□□ -0.89
PUM1-223	ENST00000532678	IGKV6D-41	A0A0C4DH26	115 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	WDR46	O15213	610 aa	Known RBP	9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	RANBP6	O60518	1105 aa	Known RBP	9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	CYP21A2	P08686	494 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	FGR	P09769	529 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	PC	P11498	1178 aa	Known RBP	9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	TFAP4	Q01664	338 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	LINC01559	Q495D7	138 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	MFSD6	Q6ZSS7	791 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	DEFB123	Q8N688	67 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	SHCBP1	Q8NEM2	672 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	NEDD1	Q8NHV4	660 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	SNIP1	Q8TAD8	396 aa	Known RBP	9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	LPAR1	Q92633	364 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	FERMT2	Q96AC1	680 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	CEP95	Q96GE4	821 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	MRGPRX2	Q96LB1	330 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	KANSL2	Q9H9L4	492 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	PRM3	Q9NNZ6	103 aa		9.46	□□□□□ -0.9
PUM1-223	ENST00000532678	DNM1L	O00429	736 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	NMT2	O60551	498 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	REC8	O95072	547 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	TAL1	P17542	331 aa	Predicted RBP	9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	FOXC1	Q12948	553 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	TRIM60	Q495X7	471 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	OLFML2B	Q68BL8	750 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	LRRC47	Q8N1G4	583 aa	Known RBP	9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	MB21D1	Q8N884	522 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	EHBP1	Q8NDI1	1231 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	REPS2	Q8NFH8	660 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	ESR2	Q92731	530 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	FOXJ1	Q92949	421 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	CHMP4C	Q96CF2	233 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	MAML3	Q96JK9	1138 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	FAM161B	Q96MY7	647 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	MMP19	Q99542	508 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	SH2D4A	Q9H788	454 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	PRDM5	Q9NQX1	630 aa	Predicted RBP	9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	HOXC10	Q9NYD6	342 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	TAF6L	Q9Y6J9	622 aa		9.45	□□□□□ -0.9
PUM1-223	ENST00000532678	COL6A3	P12111	3177 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678		B4E1Z4	1266 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	KBTBD13	C9JR72	458 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	SLC27A2	O14975	620 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	SEPT4	O43236	478 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	GFRA3	O60609	400 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	MSC	O60682	206 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	GPR37L1	O60883	481 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	TTLL1	O95922	423 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	ADCYAP1R1	P41586	468 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	PTK2	Q05397	1052 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	LRRC41	Q15345	812 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	LRIT3	Q3SXY7	679 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	CREB3L3	Q68CJ9	461 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	STOX1	Q6ZVD7	989 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	SLC17A8	Q8NDX2	589 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	FAM174A	Q8TBP5	190 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	KRT23	Q9C075	422 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	MROH8	Q9H579	483 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	CNNM2	Q9H8M5	875 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	MTMR4	Q9NYA4	1195 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	NYAP2	Q9P242	653 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	ZNF214	Q9UL59	606 aa	Predicted RBP	9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	PPP1R9A	Q9ULJ8	1098 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	LRRC37A2	A6NM11	1700 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678	DNAH12	Q6ZR08	3092 aa		9.44	□□□□□ -0.9
PUM1-223	ENST00000532678		E7EWF7	191 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	VWA5A	O00534	786 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	STRN	O43815	780 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	NDUFB10	O96000	172 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	PGK1	P00558	417 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	FCER1A	P12319	257 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	NT5C2	P49902	561 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	TRDN	Q13061	729 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	NECTIN1	Q15223	517 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	C4orf48	Q5BLP8	95 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	C9orf50	Q5SZB4	431 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	SLC39A5	Q6ZMH5	540 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	RASGRP2	Q7LDG7	609 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	RALYL	Q86SE5	291 aa	Known RBP	9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	RIOX2	Q8IUF8	465 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	CDK15	Q96Q40	435 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	ZKSCAN3	Q9BRR0	538 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	IL17RB	Q9NRM6	502 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	MTMR10	Q9NXD2	777 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	CLIP2	Q9UDT6	1046 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	STX8	Q9UNK0	236 aa		9.43	□□□□□ -0.9
PUM1-223	ENST00000532678	TNKS	O95271	1327 aa		9.42	□□□□□ -0.9
PUM1-223	ENST00000532678	TNFRSF10A	O00220	468 aa		9.42	□□□□□ -0.9
PUM1-223	ENST00000532678	SLC25A27	O95847	323 aa		9.42	□□□□□ -0.9
PUM1-223	ENST00000532678	STAT3	P40763	770 aa		9.42	□□□□□ -0.9
PUM1-223	ENST00000532678	ZNF792	Q3KQV3	632 aa		9.42	□□□□□ -0.9
PUM1-223	ENST00000532678	RNF20	Q5VTR2	975 aa		9.42	□□□□□ -0.9
PUM1-223	ENST00000532678	SNRNP48	Q6IEG0	339 aa	Known RBP	9.42	□□□□□ -0.9
PUM1-223	ENST00000532678	CYB5R4	Q7L1T6	521 aa		9.42	□□□□□ -0.9
PUM1-223	ENST00000532678	IQCA1	Q86XH1	822 aa		9.42	□□□□□ -0.9
PUM1-223	ENST00000532678	MB21D2	Q8IYB1	491 aa	Predicted RBP	9.42	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms