RNA–Protein interactions for RNA: ENST00000531339.5

SIPA1-207, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 5

Gene SIPA1, Length 799 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-207ENST00000531339 SF3A1Q15459 793 aaKnown RBP20.79■□□□□ 0.92
SIPA1-207ENST00000531339 NEK8Q86SG6 692 aa20.79■□□□□ 0.92
SIPA1-207ENST00000531339 TBCKQ8TEA7 893 aa20.79■□□□□ 0.92
SIPA1-207ENST00000531339 TBC1D5Q92609 795 aa20.79■□□□□ 0.92
SIPA1-207ENST00000531339 SPATC1LQ9H0A9 340 aa20.79■□□□□ 0.92
SIPA1-207ENST00000531339 EHMT1Q9H9B1 1298 aa20.79■□□□□ 0.92
SIPA1-207ENST00000531339 RBPJLQ9UBG7 517 aa20.79■□□□□ 0.92
SIPA1-207ENST00000531339 RIPK3Q9Y572 518 aa20.79■□□□□ 0.92
SIPA1-207ENST00000531339 ELP1O95163 1332 aa20.78■□□□□ 0.92
SIPA1-207ENST00000531339 KIAA0100Q14667 2235 aaKnown RBP20.78■□□□□ 0.92
SIPA1-207ENST00000531339 PRPF40AO75400 957 aaKnown RBP20.78■□□□□ 0.92
SIPA1-207ENST00000531339 SLC25A27O95847 323 aa20.78■□□□□ 0.92
SIPA1-207ENST00000531339 CYP2C8P10632 490 aa20.78■□□□□ 0.92
SIPA1-207ENST00000531339 SREBF2Q12772 1141 aa20.78■□□□□ 0.92
SIPA1-207ENST00000531339 SLC39A14Q15043 492 aa20.78■□□□□ 0.92
SIPA1-207ENST00000531339 LINC00301Q8NCQ3 95 aa20.78■□□□□ 0.92
SIPA1-207ENST00000531339 KCNG4Q8TDN1 519 aa20.78■□□□□ 0.92
SIPA1-207ENST00000531339 PGBD1Q96JS3 809 aa20.78■□□□□ 0.92
SIPA1-207ENST00000531339 ACAD9Q9H845 621 aa20.78■□□□□ 0.92
SIPA1-207ENST00000531339 FBXO40Q9UH90 709 aa20.78■□□□□ 0.92
SIPA1-207ENST00000531339 PCDHB6Q9Y5E3 794 aa20.78■□□□□ 0.92
SIPA1-207ENST00000531339 RANBP2P49792 3224 aaKnown RBP20.78■□□□□ 0.92
SIPA1-207ENST00000531339 NBR1Q14596 966 aa20.77■□□□□ 0.92
SIPA1-207ENST00000531339 FCHSD1Q86WN1 690 aa20.77■□□□□ 0.92
SIPA1-207ENST00000531339 NAP1L4Q99733 375 aaKnown RBP20.77■□□□□ 0.92
SIPA1-207ENST00000531339 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.77■□□□□ 0.92
SIPA1-207ENST00000531339 SPTLC2O15270 562 aa20.76■□□□□ 0.91
SIPA1-207ENST00000531339 EN2P19622 333 aaPredicted RBP20.76■□□□□ 0.91
SIPA1-207ENST00000531339 ORC2Q13416 577 aaPredicted RBP20.76■□□□□ 0.91
SIPA1-207ENST00000531339 PTPAQ15257 358 aa20.76■□□□□ 0.91
SIPA1-207ENST00000531339 ZNF174Q15697 407 aa20.76■□□□□ 0.91
SIPA1-207ENST00000531339 NSMFQ6X4W1 530 aa20.76■□□□□ 0.91
SIPA1-207ENST00000531339 RNF207Q6ZRF8 634 aa20.76■□□□□ 0.91
SIPA1-207ENST00000531339 SLC17A8Q8NDX2 589 aa20.76■□□□□ 0.91
SIPA1-207ENST00000531339 MOV10L1Q9BXT6 1211 aaKnown RBP20.76■□□□□ 0.91
SIPA1-207ENST00000531339 TXNRD2Q9NNW7 524 aa20.76■□□□□ 0.91
SIPA1-207ENST00000531339 LMBRD1Q9NUN5 540 aa20.76■□□□□ 0.91
SIPA1-207ENST00000531339 CEP290O15078 2479 aa20.76■□□□□ 0.91
SIPA1-207ENST00000531339 IGF2BP3O00425 579 aaKnown RBP eCLIP20.75■□□□□ 0.91
SIPA1-207ENST00000531339 SREBF1P36956 1147 aa20.75■□□□□ 0.91
SIPA1-207ENST00000531339 USP11P51784 963 aa20.75■□□□□ 0.91
SIPA1-207ENST00000531339 ERVK-9P63128 1117 aa20.75■□□□□ 0.91
SIPA1-207ENST00000531339 ERVK-24P63145 666 aa20.75■□□□□ 0.91
SIPA1-207ENST00000531339 CCNA1P78396 465 aa20.75■□□□□ 0.91
SIPA1-207ENST00000531339 LETM2Q2VYF4 491 aa20.75■□□□□ 0.91
SIPA1-207ENST00000531339 NCAPG2Q86XI2 1143 aa20.75■□□□□ 0.91
SIPA1-207ENST00000531339 IFNL1Q8IU54 200 aa20.75■□□□□ 0.91
SIPA1-207ENST00000531339 SHCBP1Q8NEM2 672 aa20.75■□□□□ 0.91
SIPA1-207ENST00000531339 GPRC5AQ8NFJ5 357 aa20.75■□□□□ 0.91
SIPA1-207ENST00000531339 SYTL5Q8TDW5 730 aaPredicted RBP20.75■□□□□ 0.91
SIPA1-207ENST00000531339 MORC2Q9Y6X9 1032 aaPredicted RBP20.75■□□□□ 0.91
SIPA1-207ENST00000531339 CUL9Q8IWT3 2517 aa20.75■□□□□ 0.91
SIPA1-207ENST00000531339 WNT7AO00755 349 aa20.74■□□□□ 0.91
SIPA1-207ENST00000531339 PEX10O60683 326 aa20.74■□□□□ 0.91
SIPA1-207ENST00000531339 FKTNO75072 461 aa20.74■□□□□ 0.91
SIPA1-207ENST00000531339 GCFC2P16383 781 aaKnown RBP20.74■□□□□ 0.91
SIPA1-207ENST00000531339 MCM7P33993 719 aa20.74■□□□□ 0.91
SIPA1-207ENST00000531339 TM4SF4P48230 202 aa20.74■□□□□ 0.91
SIPA1-207ENST00000531339 RPS6P62753 249 aaKnown RBP20.74■□□□□ 0.91
SIPA1-207ENST00000531339 BAATQ14032 418 aaPredicted RBP20.74■□□□□ 0.91
SIPA1-207ENST00000531339 MORF4L1Q9UBU8 362 aa20.74■□□□□ 0.91
SIPA1-207ENST00000531339 MYH7BA7E2Y1 1941 aa20.73■□□□□ 0.91
SIPA1-207ENST00000531339 GOLGA6L4A6NEF3 574 aa20.73■□□□□ 0.91
SIPA1-207ENST00000531339 CCNT1O60563 726 aaKnown RBP20.73■□□□□ 0.91
SIPA1-207ENST00000531339 PPP6R2O75170 966 aa20.73■□□□□ 0.91
SIPA1-207ENST00000531339 ME1P48163 572 aa20.73■□□□□ 0.91
SIPA1-207ENST00000531339 ARHGAP4P98171 946 aa20.73■□□□□ 0.91
SIPA1-207ENST00000531339 TAF1CQ15572 869 aaPredicted RBP20.73■□□□□ 0.91
SIPA1-207ENST00000531339 Q3C1V9 767 aa20.73■□□□□ 0.91
SIPA1-207ENST00000531339 SLC30A10Q6XR72 485 aa20.73■□□□□ 0.91
SIPA1-207ENST00000531339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.73■□□□□ 0.91
SIPA1-207ENST00000531339 MROH8Q9H579 483 aa20.73■□□□□ 0.91
SIPA1-207ENST00000531339 PFASO15067 1338 aa20.73■□□□□ 0.91
SIPA1-207ENST00000531339 CYP3A4P08684 503 aa20.72■□□□□ 0.91
SIPA1-207ENST00000531339 ERCC3P19447 782 aa20.72■□□□□ 0.91
SIPA1-207ENST00000531339 UBE2HP62256 183 aa20.72■□□□□ 0.91
SIPA1-207ENST00000531339 PTGDRQ13258 359 aa20.72■□□□□ 0.91
SIPA1-207ENST00000531339 PPP4R3AQ6IN85 833 aa20.72■□□□□ 0.91
SIPA1-207ENST00000531339 MOXD1Q6UVY6 613 aa20.72■□□□□ 0.91
SIPA1-207ENST00000531339 ANKRD13CQ8N6S4 541 aa20.72■□□□□ 0.91
SIPA1-207ENST00000531339 CRYGNQ8WXF5 182 aa20.72■□□□□ 0.91
SIPA1-207ENST00000531339 A1CFQ9NQ94 594 aaKnown RBP20.72■□□□□ 0.91
SIPA1-207ENST00000531339 CYP39A1Q9NYL5 469 aa20.72■□□□□ 0.91
SIPA1-207ENST00000531339 COL20A1Q9P218 1284 aa20.72■□□□□ 0.91
SIPA1-207ENST00000531339 LAD1O00515 517 aa20.71■□□□□ 0.91
SIPA1-207ENST00000531339 MARCKSP29966 332 aaPredicted RBP20.71■□□□□ 0.91
SIPA1-207ENST00000531339 ATP2C1P98194 919 aaPredicted RBP20.71■□□□□ 0.91
SIPA1-207ENST00000531339 FAM110CQ1W6H9 321 aa20.71■□□□□ 0.91
SIPA1-207ENST00000531339 ANKRD35Q8N283 1001 aa20.71■□□□□ 0.91
SIPA1-207ENST00000531339 RPTORQ8N122 1335 aa20.71■□□□□ 0.91
SIPA1-207ENST00000531339 CYP3A7-CYP3A51PA0A087WV96 503 aa20.7■□□□□ 0.9
SIPA1-207ENST00000531339 EDIL3O43854 480 aa20.7■□□□□ 0.9
SIPA1-207ENST00000531339 NEMFO60524 1076 aa20.7■□□□□ 0.9
SIPA1-207ENST00000531339 GADD45BO75293 160 aaPredicted RBP20.7■□□□□ 0.9
SIPA1-207ENST00000531339 CYP3A7P24462 503 aa20.7■□□□□ 0.9
SIPA1-207ENST00000531339 CIITAP33076 1130 aa20.7■□□□□ 0.9
SIPA1-207ENST00000531339 CCAR1Q8IX12 1150 aaKnown RBP20.7■□□□□ 0.9
SIPA1-207ENST00000531339 KRI1Q8N9T8 703 aaKnown RBP20.7■□□□□ 0.9
SIPA1-207ENST00000531339 TAAR1Q96RJ0 339 aa20.7■□□□□ 0.9
SIPA1-207ENST00000531339 ZFYVE28Q9HCC9 887 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms