RNA–Protein interactions for RNA: ENST00000531333.5

CASP4-209, Transcript of caspase 4, humanhuman

TSL 4

Gene CASP4, Length 667 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-209ENST00000531333 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.18□□□□□ -1.1
CASP4-209ENST00000531333 SIT1Q9Y3P8 196 aa8.18□□□□□ -1.1
CASP4-209ENST00000531333 RB1CC1Q8TDY2 1594 aa8.18□□□□□ -1.1
CASP4-209ENST00000531333 C2orf71A6NGG8 1288 aa8.17□□□□□ -1.1
CASP4-209ENST00000531333 SEPHS1P49903 392 aa8.17□□□□□ -1.1
CASP4-209ENST00000531333 BACE2Q9Y5Z0 518 aa8.17□□□□□ -1.1
CASP4-209ENST00000531333 MROH6A6NGR9 719 aa8.16□□□□□ -1.1
CASP4-209ENST00000531333 NACADO15069 1562 aa8.16□□□□□ -1.1
CASP4-209ENST00000531333 NTRK1P04629 796 aa8.16□□□□□ -1.1
CASP4-209ENST00000531333 DPY19L1Q2PZI1 675 aa8.16□□□□□ -1.1
CASP4-209ENST00000531333 FBXW10Q5XX13 1052 aa8.16□□□□□ -1.1
CASP4-209ENST00000531333 KYQ8NBH2 561 aa8.16□□□□□ -1.1
CASP4-209ENST00000531333 PCDH18Q9HCL0 1135 aa8.16□□□□□ -1.1
CASP4-209ENST00000531333 C7orf72A4D263 438 aa8.15□□□□□ -1.1
CASP4-209ENST00000531333 C6P13671 934 aa8.15□□□□□ -1.1
CASP4-209ENST00000531333 PAMP19021 973 aa8.15□□□□□ -1.1
CASP4-209ENST00000531333 PRR31Q5SQ13 230 aa8.15□□□□□ -1.1
CASP4-209ENST00000531333 MIB1Q86YT6 1006 aa8.15□□□□□ -1.1
CASP4-209ENST00000531333 Q8N1X5 172 aa8.15□□□□□ -1.1
CASP4-209ENST00000531333 ARHGEF39Q8N4T4 335 aa8.15□□□□□ -1.1
CASP4-209ENST00000531333 FAM26EQ8N5C1 309 aa8.15□□□□□ -1.1
CASP4-209ENST00000531333 CHST13Q8NET6 341 aa8.15□□□□□ -1.1
CASP4-209ENST00000531333 PLEKHO2Q8TD55 490 aa8.15□□□□□ -1.1
CASP4-209ENST00000531333 USP33Q8TEY7 942 aa8.15□□□□□ -1.1
CASP4-209ENST00000531333 CGGBP1Q9UFW8 167 aaPredicted RBP8.15□□□□□ -1.1
CASP4-209ENST00000531333 ST6GALNAC2Q9UJ37 374 aa8.15□□□□□ -1.1
CASP4-209ENST00000531333 NPHP3-ACAD11A0A0J9YXS1 232 aa8.14□□□□□ -1.11
CASP4-209ENST00000531333 CDSNQ15517 529 aa8.14□□□□□ -1.11
CASP4-209ENST00000531333 CCDC27Q2M243 656 aa8.14□□□□□ -1.11
CASP4-209ENST00000531333 C9orf131Q5VYM1 1079 aa8.14□□□□□ -1.11
CASP4-209ENST00000531333 ETV3LQ6ZN32 361 aa8.14□□□□□ -1.11
CASP4-209ENST00000531333 LIMS2Q7Z4I7 341 aa8.14□□□□□ -1.11
CASP4-209ENST00000531333 SPRED1Q7Z699 444 aa8.14□□□□□ -1.11
CASP4-209ENST00000531333 BCL2L13Q9BXK5 485 aa8.14□□□□□ -1.11
CASP4-209ENST00000531333 TACR2P21452 398 aa8.13□□□□□ -1.11
CASP4-209ENST00000531333 AMPD2Q01433 879 aa8.13□□□□□ -1.11
CASP4-209ENST00000531333 HEATR6Q6AI08 1181 aaKnown RBP8.13□□□□□ -1.11
CASP4-209ENST00000531333 MCTP2Q6DN12 878 aa8.13□□□□□ -1.11
CASP4-209ENST00000531333 BORAQ6PGQ7 559 aa8.13□□□□□ -1.11
CASP4-209ENST00000531333 FAM124AQ86V42 546 aa8.13□□□□□ -1.11
CASP4-209ENST00000531333 TXNDC5Q8NBS9 432 aaKnown RBP8.13□□□□□ -1.11
CASP4-209ENST00000531333 GIPC2Q8TF65 315 aa8.13□□□□□ -1.11
CASP4-209ENST00000531333 GBP3Q9H0R5 595 aa8.13□□□□□ -1.11
CASP4-209ENST00000531333 TRBV23OR9-2A0A075B6M9 112 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 NPHS1O60500 1241 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 FUCA1P04066 466 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 EPHX1P07099 455 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 GRB10Q13322 594 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 GNPTABQ3T906 1256 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 ZNF326Q5BKZ1 582 aaKnown RBP8.12□□□□□ -1.11
CASP4-209ENST00000531333 GLB1LQ6UWU2 654 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 TTLL6Q8N841 843 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 TMEM87AQ8NBN3 555 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 SH3RF3Q8TEJ3 882 aaPredicted RBP8.12□□□□□ -1.11
CASP4-209ENST00000531333 DPF3Q92784 378 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 RCC1LQ96I51 464 aaKnown RBP8.12□□□□□ -1.11
CASP4-209ENST00000531333 FGD4Q96M96 766 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 TSC22D4Q9Y3Q8 395 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 MYO15BQ96JP2 1530 aa8.12□□□□□ -1.11
CASP4-209ENST00000531333 ZNF536O15090 1300 aa8.11□□□□□ -1.11
CASP4-209ENST00000531333 PPM1BO75688 479 aa8.11□□□□□ -1.11
CASP4-209ENST00000531333 SLPIP03973 132 aa8.11□□□□□ -1.11
CASP4-209ENST00000531333 ACVRL1P37023 503 aa8.11□□□□□ -1.11
CASP4-209ENST00000531333 HMGA2P52926 109 aa8.11□□□□□ -1.11
CASP4-209ENST00000531333 ITGA1P56199 1179 aa8.11□□□□□ -1.11
CASP4-209ENST00000531333 MBLAC2Q68D91 279 aa8.11□□□□□ -1.11
CASP4-209ENST00000531333 CRIP3Q6Q6R5 217 aa8.11□□□□□ -1.11
CASP4-209ENST00000531333 ADAT2Q7Z6V5 191 aaKnown RBP8.11□□□□□ -1.11
CASP4-209ENST00000531333 STK32CQ86UX6 486 aa8.11□□□□□ -1.11
CASP4-209ENST00000531333 DCP2Q8IU60 420 aaKnown RBP8.11□□□□□ -1.11
CASP4-209ENST00000531333 PCDHB10Q9UN67 800 aa8.11□□□□□ -1.11
CASP4-209ENST00000531333 DCAF1Q9Y4B6 1507 aa8.11□□□□□ -1.11
CASP4-209ENST00000531333 OVOL3O00110 214 aa8.1□□□□□ -1.11
CASP4-209ENST00000531333 SGSM2O43147 1006 aa8.1□□□□□ -1.11
CASP4-209ENST00000531333 B4GALT3O60512 393 aa8.1□□□□□ -1.11
CASP4-209ENST00000531333 GDF5P43026 501 aa8.1□□□□□ -1.11
CASP4-209ENST00000531333 CD300LDQ6UXZ3 194 aa8.1□□□□□ -1.11
CASP4-209ENST00000531333 PHAXQ9H814 394 aaKnown RBP8.1□□□□□ -1.11
CASP4-209ENST00000531333 PPP4R1LQ9P1A2 415 aa8.1□□□□□ -1.11
CASP4-209ENST00000531333 SLC12A7Q9Y666 1083 aa8.1□□□□□ -1.11
CASP4-209ENST00000531333 DDX3XO00571 662 aaKnown RBP eCLIP8.09□□□□□ -1.11
CASP4-209ENST00000531333 ZNF76P36508 570 aa8.09□□□□□ -1.11
CASP4-209ENST00000531333 RBM10P98175 930 aaKnown RBP8.09□□□□□ -1.11
CASP4-209ENST00000531333 ICAM4Q14773 271 aa8.09□□□□□ -1.11
CASP4-209ENST00000531333 ZNF394Q53GI3 561 aa8.09□□□□□ -1.11
CASP4-209ENST00000531333 ZNF513Q8N8E2 541 aaPredicted RBP8.09□□□□□ -1.11
CASP4-209ENST00000531333 KLHL6Q8WZ60 621 aa8.09□□□□□ -1.11
CASP4-209ENST00000531333 COPS5Q92905 334 aa8.09□□□□□ -1.11
CASP4-209ENST00000531333 LCORQ96JN0 433 aaPredicted RBP8.09□□□□□ -1.11
CASP4-209ENST00000531333 PCDHGB7Q9Y5F8 929 aa8.09□□□□□ -1.11
CASP4-209ENST00000531333 LAMTOR5O43504 91 aa8.08□□□□□ -1.12
CASP4-209ENST00000531333 SLC7A5Q01650 507 aa8.08□□□□□ -1.12
CASP4-209ENST00000531333 CCDC81Q6ZN84 652 aa8.08□□□□□ -1.12
CASP4-209ENST00000531333 KISS1RQ969F8 398 aaPredicted RBP8.08□□□□□ -1.12
CASP4-209ENST00000531333 MMP19Q99542 508 aa8.08□□□□□ -1.12
CASP4-209ENST00000531333 AP5M1Q9H0R1 490 aa8.08□□□□□ -1.12
CASP4-209ENST00000531333 CD248Q9HCU0 757 aa8.08□□□□□ -1.12
CASP4-209ENST00000531333 MARCH2Q9P0N8 246 aa8.08□□□□□ -1.12
CASP4-209ENST00000531333 CLEC1BQ9P126 229 aa8.08□□□□□ -1.12
CASP4-209ENST00000531333 C9orf118A6NHY6 69 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms