RNA–Protein interactions for RNA: ENST00000531140.1

SC5D-207, Transcript of sterol-C5-desaturase, humanhuman

TSL 1 (best)

Gene SC5D, Length 767 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-207ENST00000531140 BARHL2Q9NY43 387 aa18.19■□□□□ 0.5
SC5D-207ENST00000531140 PCDHA1Q9Y5I3 950 aa18.19■□□□□ 0.5
SC5D-207ENST00000531140 ALPK3Q96L96 1907 aa18.19■□□□□ 0.5
SC5D-207ENST00000531140 PLXNA1Q9UIW2 1896 aa18.18■□□□□ 0.5
SC5D-207ENST00000531140 PIK3CDO00329 1044 aa18.18■□□□□ 0.5
SC5D-207ENST00000531140 GJC2Q5T442 439 aaPredicted RBP18.18■□□□□ 0.5
SC5D-207ENST00000531140 MSL3Q8N5Y2 521 aaKnown RBP18.18■□□□□ 0.5
SC5D-207ENST00000531140 RAVER2Q9HCJ3 691 aaKnown RBP18.18■□□□□ 0.5
SC5D-207ENST00000531140 SZT2Q5T011 3432 aa18.17■□□□□ 0.5
SC5D-207ENST00000531140 RTP1P59025 263 aa18.17■□□□□ 0.5
SC5D-207ENST00000531140 STK3Q13188 491 aa18.17■□□□□ 0.5
SC5D-207ENST00000531140 KCTD2Q14681 263 aa18.17■□□□□ 0.5
SC5D-207ENST00000531140 CPXCR1Q8N123 301 aa18.17■□□□□ 0.5
SC5D-207ENST00000531140 NSUN7Q8NE18 718 aaKnown RBP18.17■□□□□ 0.5
SC5D-207ENST00000531140 MAML3Q96JK9 1138 aa18.17■□□□□ 0.5
SC5D-207ENST00000531140 TRERF1Q96PN7 1200 aa18.17■□□□□ 0.5
SC5D-207ENST00000531140 NCOA5Q9HCD5 579 aaKnown RBP18.17■□□□□ 0.5
SC5D-207ENST00000531140 RNF146Q9NTX7 359 aa18.17■□□□□ 0.5
SC5D-207ENST00000531140 V9GY48 417 aaPredicted RBP18.17■□□□□ 0.5
SC5D-207ENST00000531140 LARGE1O95461 756 aa18.16■□□□□ 0.5
SC5D-207ENST00000531140 GNA11P29992 359 aa18.16■□□□□ 0.5
SC5D-207ENST00000531140 BECN1Q14457 450 aa18.16■□□□□ 0.5
SC5D-207ENST00000531140 PRAMEF19Q5SWL8 479 aa18.16■□□□□ 0.5
SC5D-207ENST00000531140 CCDC174Q6PII3 467 aa18.16■□□□□ 0.5
SC5D-207ENST00000531140 SLC39A5Q6ZMH5 540 aa18.16■□□□□ 0.5
SC5D-207ENST00000531140 ZNF467Q7Z7K2 595 aaPredicted RBP18.16■□□□□ 0.5
SC5D-207ENST00000531140 HOMER1Q86YM7 354 aa18.16■□□□□ 0.5
SC5D-207ENST00000531140 BICD2Q8TD16 824 aa18.16■□□□□ 0.5
SC5D-207ENST00000531140 AGBL1Q96MI9 1066 aa18.16■□□□□ 0.5
SC5D-207ENST00000531140 SLC26A6Q9BXS9 759 aa18.16■□□□□ 0.5
SC5D-207ENST00000531140 CPVLQ9H3G5 476 aa18.16■□□□□ 0.5
SC5D-207ENST00000531140 VAT1LQ9HCJ6 419 aa18.16■□□□□ 0.5
SC5D-207ENST00000531140 CD2BP2O95400 341 aaKnown RBP18.15■□□□□ 0.5
SC5D-207ENST00000531140 CTDNEP1O95476 244 aa18.15■□□□□ 0.5
SC5D-207ENST00000531140 RARBP10826 455 aa18.15■□□□□ 0.5
SC5D-207ENST00000531140 ALAS1P13196 640 aa18.15■□□□□ 0.5
SC5D-207ENST00000531140 CALML3P27482 149 aa18.15■□□□□ 0.5
SC5D-207ENST00000531140 PKN1Q16512 942 aa18.15■□□□□ 0.5
SC5D-207ENST00000531140 RAB11FIP4Q86YS3 637 aa18.15■□□□□ 0.5
SC5D-207ENST00000531140 CLEC4DQ8WXI8 215 aa18.15■□□□□ 0.5
SC5D-207ENST00000531140 ZMYND12Q9H0C1 365 aa18.15■□□□□ 0.5
SC5D-207ENST00000531140 ATP11BQ9Y2G3 1177 aa18.15■□□□□ 0.5
SC5D-207ENST00000531140 DNAJC25-GNG10A0A024R161 153 aa18.14■□□□□ 0.49
SC5D-207ENST00000531140 PTPDC1A2A3K4 754 aa18.14■□□□□ 0.49
SC5D-207ENST00000531140 B4DLN1 442 aa18.14■□□□□ 0.49
SC5D-207ENST00000531140 PPP1R11O60927 126 aaPredicted RBP18.14■□□□□ 0.49
SC5D-207ENST00000531140 HSD17B4P51659 736 aa18.14■□□□□ 0.49
SC5D-207ENST00000531140 MRPL12P52815 198 aaKnown RBP18.14■□□□□ 0.49
SC5D-207ENST00000531140 ST3GAL1Q11201 340 aa18.14■□□□□ 0.49
SC5D-207ENST00000531140 LRRC41Q15345 812 aa18.14■□□□□ 0.49
SC5D-207ENST00000531140 ANO1Q5XXA6 986 aa18.14■□□□□ 0.49
SC5D-207ENST00000531140 DNERQ8NFT8 737 aa18.14■□□□□ 0.49
SC5D-207ENST00000531140 MPHOSPH6Q99547 160 aaKnown RBP18.14■□□□□ 0.49
SC5D-207ENST00000531140 TINF2Q9BSI4 451 aa18.14■□□□□ 0.49
SC5D-207ENST00000531140 ORC3Q9UBD5 711 aaPredicted RBP18.14■□□□□ 0.49
SC5D-207ENST00000531140 RIPK3Q9Y572 518 aa18.14■□□□□ 0.49
SC5D-207ENST00000531140 STXBP3O00186 592 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 FOSP01100 380 aaPredicted RBP18.13■□□□□ 0.49
SC5D-207ENST00000531140 ADCYAP1R1P41586 468 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 WWC2Q6AWC2 1192 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 RNF207Q6ZRF8 634 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 RNF180Q86T96 592 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 CCDC83Q8IWF9 413 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 CMTR1Q8N1G2 835 aaKnown RBP18.13■□□□□ 0.49
SC5D-207ENST00000531140 ANKRD35Q8N283 1001 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 CCDC82Q8N4S0 544 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 NECAB1Q8N987 351 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 DAGLBQ8NCG7 672 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 CUL5Q93034 780 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 PHKBQ93100 1093 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 LARP6Q9BRS8 491 aaKnown RBP18.13■□□□□ 0.49
SC5D-207ENST00000531140 C6orf50Q9HD87 102 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 MTMR10Q9NXD2 777 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 ADD3Q9UEY8 706 aaKnown RBP18.13■□□□□ 0.49
SC5D-207ENST00000531140 CNPY2Q9Y2B0 182 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 STXBP5LQ9Y2K9 1186 aa18.13■□□□□ 0.49
SC5D-207ENST00000531140 LCTP09848 1927 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 PGK2P07205 417 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 PDCP20941 246 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 NAPAP54920 295 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 AP3B2Q13367 1082 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 ZNF792Q3KQV3 632 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 USH1GQ495M9 461 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 C1orf53Q5VUE5 145 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 FAM109BQ6ICB4 259 aaPredicted RBP18.12■□□□□ 0.49
SC5D-207ENST00000531140 NOL8Q76FK4 1167 aaKnown RBP18.12■□□□□ 0.49
SC5D-207ENST00000531140 HEATR3Q7Z4Q2 680 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 DDX11Q96FC9 970 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 PSTPIP2Q9H939 334 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 RIC8AQ9NPQ8 531 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 A1CFQ9NQ94 594 aaKnown RBP18.12■□□□□ 0.49
SC5D-207ENST00000531140 XPNPEP3Q9NQH7 507 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 CYP39A1Q9NYL5 469 aa18.12■□□□□ 0.49
SC5D-207ENST00000531140 GCOM1H8Y6P7 765 aaPredicted RBP18.11■□□□□ 0.49
SC5D-207ENST00000531140 POLR2MP0CAP2 368 aa18.11■□□□□ 0.49
SC5D-207ENST00000531140 SNX17Q15036 470 aa18.11■□□□□ 0.49
SC5D-207ENST00000531140 Q7L0L9 218 aa18.11■□□□□ 0.49
SC5D-207ENST00000531140 FAM133AQ8N9E0 248 aa18.11■□□□□ 0.49
SC5D-207ENST00000531140 FRMPD4Q14CM0 1322 aa18.1■□□□□ 0.49
SC5D-207ENST00000531140 OPLAHO14841 1288 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms