RNA–Protein interactions for RNA: ENST00000530311.6

TRIM49D1-202, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-202ENST00000530311 NEDD1Q8NHV4 660 aa10.29□□□□□ -0.76
TRIM49D1-202ENST00000530311 HDAC7Q8WUI4 952 aa10.29□□□□□ -0.76
TRIM49D1-202ENST00000530311 CCDC47Q96A33 483 aaKnown RBP10.29□□□□□ -0.76
TRIM49D1-202ENST00000530311 CCDC42Q96M95 316 aa10.29□□□□□ -0.76
TRIM49D1-202ENST00000530311 MTMR9Q96QG7 549 aa10.29□□□□□ -0.76
TRIM49D1-202ENST00000530311 ERGIC2Q96RQ1 377 aa10.29□□□□□ -0.76
TRIM49D1-202ENST00000530311 PSMB7Q99436 277 aa10.29□□□□□ -0.76
TRIM49D1-202ENST00000530311 LZTS2Q9BRK4 669 aa10.29□□□□□ -0.76
TRIM49D1-202ENST00000530311 MMRN2Q9H8L6 949 aa10.29□□□□□ -0.76
TRIM49D1-202ENST00000530311 CAPN6Q9Y6Q1 641 aa10.29□□□□□ -0.76
TRIM49D1-202ENST00000530311 SNED1Q8TER0 1413 aa10.29□□□□□ -0.76
TRIM49D1-202ENST00000530311 MOCS3O95396 460 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 GNA11P29992 359 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 EIF4A3P38919 411 aaKnown RBP10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 KIF5AQ12840 1032 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 GRAPQ13588 217 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 ECM1Q16610 540 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 VWA3BQ502W6 1294 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 CNNM4Q6P4Q7 775 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 ZNF662Q6ZS27 426 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 SV2BQ7L1I2 683 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 REXO1Q8N1G1 1221 aaKnown RBP10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 RETREG2Q8NC44 543 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 GRAPLQ8TC17 118 aaPredicted RBP10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 COG1Q8WTW3 980 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 SECISBP2LQ93073 1101 aaKnown RBP10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 CALML4Q96GE6 196 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 PURBQ96QR8 312 aaKnown RBP10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 EHD2Q9NZN4 543 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 SEC63Q9UGP8 760 aaKnown RBP10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 SIK3Q9Y2K2 1263 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 LEMD3Q9Y2U8 911 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 PCDHA13Q9Y5I0 950 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 LTBP4Q8N2S1 1624 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 ZC3H4Q9UPT8 1303 aaKnown RBP10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 IPO7O95373 1038 aaKnown RBP10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 CXCR5P32302 372 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 VAV2P52735 878 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 AMPD3Q01432 767 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 CALCRLQ16602 461 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 HSP90B2PQ58FF3 399 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 FKBP15Q5T1M5 1219 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 CREG2Q8IUH2 290 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 FAM114A1Q8IWE2 563 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 LRRC47Q8N1G4 583 aaKnown RBP10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 MSL3Q8N5Y2 521 aaKnown RBP10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 GOLGA5Q8TBA6 731 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 FAM71BQ8TC56 605 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 NDST4Q9H3R1 872 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 FAM204AQ9H8W3 233 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 MAGEF1Q9HAY2 307 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 CD209Q9NNX6 404 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 TMEM51Q9NW97 253 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 SALL4Q9UJQ4 1053 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 HPCAL4Q9UM19 191 aa10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 RTCBQ9Y3I0 505 aaKnown RBP10.28□□□□□ -0.76
TRIM49D1-202ENST00000530311 NCK2O43639 380 aa10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 RNF40O75150 1001 aa10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 LDHCP07864 332 aa10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 MATR3P43243 847 aaKnown RBP eCLIP10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 RHBDL3P58872 404 aa10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 SPA17Q15506 151 aa10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 UBE2SQ16763 222 aa10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 RC3H1Q5TC82 1133 aaKnown RBP10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 CCNI2Q6ZMN8 369 aaPredicted RBP10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 RRAGAQ7L523 313 aa10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 ZNF804AQ7Z570 1209 aa10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 PLEKHA4Q9H4M7 779 aa10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 GPCPD1Q9NPB8 672 aa10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 CCNL1Q9UK58 526 aaPredicted RBP10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 PLAGL2Q9UPG8 496 aa10.27□□□□□ -0.77
TRIM49D1-202ENST00000530311 GPR75-ASB3A0A0A6YYF3 556 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 A0A1W2PQJ5 194 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 LRRC53A6NM62 1247 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 TRIM66O15016 1216 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 UFL1O94874 794 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 TUBBP07437 444 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 SLURP2P0DP57 97 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 GGCXP38435 758 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 KIF11P52732 1056 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 SLC7A5Q01650 507 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 APBA1Q02410 837 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 NFRKBQ6P4R8 1299 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 UNC13DQ70J99 1090 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 EHBP1Q8NDI1 1231 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 LARP4BQ92615 738 aaKnown RBP10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 LRRC1Q9BTT6 524 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 IFIH1Q9BYX4 1025 aaKnown RBP10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 KANSL2Q9H9L4 492 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 SNX12Q9UMY4 172 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 AGPSO00116 658 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 PRPF6O94906 941 aaKnown RBP10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 PDHBP11177 359 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 CDK17Q00537 523 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 CKAP4Q07065 602 aaKnown RBP10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 SEMA3FQ13275 785 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 PICALMQ13492 652 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 FIGNQ5HY92 759 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 SNX29Q8TEQ0 813 aa10.26□□□□□ -0.77
TRIM49D1-202ENST00000530311 DDX12PQ92771 950 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms