RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 HERC6Q8IVU3 1022 aa4.21□□□□□ -1.74
PTPRC-213ENST00000529828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.21□□□□□ -1.74
PTPRC-213ENST00000529828 TRERF1Q96PN7 1200 aa4.21□□□□□ -1.74
PTPRC-213ENST00000529828 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.21□□□□□ -1.74
PTPRC-213ENST00000529828 EPB41L4AQ9HCS5 686 aaPredicted RBP4.21□□□□□ -1.74
PTPRC-213ENST00000529828 NYAP2Q9P242 653 aa4.21□□□□□ -1.74
PTPRC-213ENST00000529828 ARPP21Q9UBL0 812 aaPredicted RBP4.21□□□□□ -1.74
PTPRC-213ENST00000529828 FEM1BQ9UK73 627 aa4.21□□□□□ -1.74
PTPRC-213ENST00000529828 ZNF536O15090 1300 aa4.21□□□□□ -1.74
PTPRC-213ENST00000529828 WDR87Q6ZQQ6 2873 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 IGKV6D-41A0A0C4DH26 115 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 ASB14A6NK59 587 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 GPR37L1O60883 481 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 BMP3P12645 472 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 ACTN1P12814 892 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 KCNA5P22460 613 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 TDO2P48775 406 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 MRE11P49959 708 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 NKX3-2P78367 333 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 DEFB103AP81534 67 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 NBPF20Q3BBV1 942 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 TSHZ3Q63HK5 1081 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 OR6J1Q8NGC5 347 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 COPS5Q92905 334 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 KIF1BPQ96EK5 621 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 SLC9A7Q96T83 725 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 UBE2ZQ9H832 354 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-213ENST00000529828 CYP39A1Q9NYL5 469 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 GREB1LQ9C091 1923 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-213ENST00000529828 VPS13AQ96RL7 3174 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 GSG1L2A8MUP6 293 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 PI4K2BG5E9Z4 385 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 SMARCA5O60264 1052 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-213ENST00000529828 PFKMP08237 780 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 POU3F3P20264 500 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-213ENST00000529828 MCCP23508 829 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 KCNJ6P48051 423 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 PURAQ00577 322 aaKnown RBP4.2□□□□□ -1.74
PTPRC-213ENST00000529828 UBE3CQ15386 1083 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 TCTN1Q2MV58 587 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.2□□□□□ -1.74
PTPRC-213ENST00000529828 GJD3Q8N144 294 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 STRBPQ96SI9 672 aaKnown RBP4.2□□□□□ -1.74
PTPRC-213ENST00000529828 HAUS7Q99871 368 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 ZBED2Q9BTP6 218 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 WDR11Q9BZH6 1224 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 MTMR4Q9NYA4 1195 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 NOD1Q9Y239 953 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 VPS9D1Q9Y2B5 631 aa4.2□□□□□ -1.74
PTPRC-213ENST00000529828 ZFHX2Q9C0A1 2572 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-213ENST00000529828 KIF28PB7ZC32 967 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 H3BQ06 376 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-213ENST00000529828 M0R2C6 588 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 NFIBO00712 420 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 NMT2O60551 498 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 TTLL1O95922 423 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 APPP05067 770 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 IQCF3P0C7M6 154 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 SUPT20HL2P0C7V6 817 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 TSPY3P0CV98 308 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 TSPY8P0CW00 308 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 ATP5JP18859 108 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 SLC1A4P43007 532 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 STAT2P52630 851 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 OAZ1P54368 228 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 WDR5P61964 334 aaKnown RBP4.19□□□□□ -1.74
PTPRC-213ENST00000529828 NHLH1Q02575 133 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 BAATQ14032 418 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-213ENST00000529828 CSPP1Q1MSJ5 1256 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 DUSP28Q4G0W2 176 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 HSP90AB4PQ58FF6 505 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 IQSEC1Q6DN90 963 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 SLC30A10Q6XR72 485 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 EP400NLQ6ZTU2 488 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 SIRT2Q8IXJ6 389 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 ZNF444Q8N0Y2 327 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-213ENST00000529828 RETREG2Q8NC44 543 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 GMCL1P1Q8NEA9 526 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-213ENST00000529828 OSBP2Q969R2 916 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 MTG1Q9BT17 334 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-213ENST00000529828 VTA1Q9NP79 307 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 GPHNQ9NQX3 736 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-213ENST00000529828 POLR3EQ9NVU0 708 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 CCPG1Q9ULG6 757 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 ARIH1Q9Y4X5 557 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-213ENST00000529828 TET1Q8NFU7 2136 aa4.19□□□□□ -1.74
PTPRC-213ENST00000529828 MYH4Q9Y623 1939 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 PTPDC1A2A3K4 754 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 PRR33A8MZF0 331 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 GPAA1O43292 621 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 CSPG5O95196 566 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 CALML3P27482 149 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 SLC16A2P36021 539 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 CPT1AP50416 773 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 ALDH5A1P51649 535 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-213ENST00000529828 TFAP4Q01664 338 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 CCDC96Q2M329 555 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 SBK1Q52WX2 424 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 PTCRAQ6ISU1 281 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms