RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 JAKMIP3Q5VZ66 844 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 OLFML2BQ68BL8 750 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 ZNF467Q7Z7K2 595 aaPredicted RBP13.08□□□□□ -0.32
CHD7-209ENST00000529472 TRMT44Q8IYL2 757 aaKnown RBP13.08□□□□□ -0.32
CHD7-209ENST00000529472 SAMD3Q8N6K7 520 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 SPRYD3Q8NCJ5 442 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 BICD2Q8TD16 824 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 RASGRP4Q8TDF6 673 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 PXYLP1Q8TE99 480 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 PGBD1Q96JS3 809 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 TINF2Q9BSI4 451 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 PHF20Q9BVI0 1012 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 MCOLN1Q9GZU1 580 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 MAF1Q9H063 256 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 PXMP2Q9NR77 195 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 PCDHA4Q9UN74 947 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 KIF3AQ9Y496 699 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 LRRC37A2A6NM11 1700 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 HMGCRP04035 888 aa13.07□□□□□ -0.32
CHD7-209ENST00000529472 INHAP05111 366 aa13.07□□□□□ -0.32
CHD7-209ENST00000529472 TRIM32Q13049 653 aa13.07□□□□□ -0.32
CHD7-209ENST00000529472 NPY5RQ15761 445 aa13.07□□□□□ -0.32
CHD7-209ENST00000529472 MFSD14CQ5VZR4 134 aa13.07□□□□□ -0.32
CHD7-209ENST00000529472 ARMCX2Q7L311 632 aa13.07□□□□□ -0.32
CHD7-209ENST00000529472 BLIDQ8IZY5 108 aa13.07□□□□□ -0.32
CHD7-209ENST00000529472 FAM177A1Q8N128 213 aaPredicted RBP13.07□□□□□ -0.32
CHD7-209ENST00000529472 DNERQ8NFT8 737 aa13.07□□□□□ -0.32
CHD7-209ENST00000529472 IL31RAQ8NI17 732 aa13.07□□□□□ -0.32
CHD7-209ENST00000529472 NSUN6Q8TEA1 469 aaKnown RBP13.07□□□□□ -0.32
CHD7-209ENST00000529472 INTS4Q96HW7 963 aaKnown RBP13.07□□□□□ -0.32
CHD7-209ENST00000529472 MPHOSPH6Q99547 160 aaKnown RBP13.07□□□□□ -0.32
CHD7-209ENST00000529472 PCDHA6Q9UN73 950 aa13.07□□□□□ -0.32
CHD7-209ENST00000529472 PCDHA8Q9Y5H6 950 aa13.07□□□□□ -0.32
CHD7-209ENST00000529472 SYNGAP1Q96PV0 1343 aa13.07□□□□□ -0.32
CHD7-209ENST00000529472 MKI67P46013 3256 aaKnown RBP13.06□□□□□ -0.32
CHD7-209ENST00000529472 ASB14A6NK59 587 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 MYCP01106 439 aaPredicted RBP13.06□□□□□ -0.32
CHD7-209ENST00000529472 MMP1P03956 469 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 PRKAR2AP13861 404 aaKnown RBP13.06□□□□□ -0.32
CHD7-209ENST00000529472 KRT2P35908 639 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 CLK2P49760 499 aaKnown RBP13.06□□□□□ -0.32
CHD7-209ENST00000529472 PDE4DQ08499 809 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 AP3B2Q13367 1082 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 COL13A1Q5TAT6 717 aaPredicted RBP13.06□□□□□ -0.32
CHD7-209ENST00000529472 KRT40Q6A162 431 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 GALNT17Q6IS24 598 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 MAMDC4Q6UXC1 1216 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 TEX2Q8IWB9 1127 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 DAGLBQ8NCG7 672 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 OXER1Q8TDS5 423 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 ANO3Q9BYT9 981 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 BRMS1Q9HCU9 246 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.06□□□□□ -0.32
CHD7-209ENST00000529472 FRMPD4Q14CM0 1322 aa13.06□□□□□ -0.32
CHD7-209ENST00000529472 B4DLN1 442 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 H3BQV1 296 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 FOSP01100 380 aaPredicted RBP13.05□□□□□ -0.32
CHD7-209ENST00000529472 MYCLP12524 364 aaPredicted RBP13.05□□□□□ -0.32
CHD7-209ENST00000529472 EDNRBP24530 442 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 ANP32AP39687 249 aaKnown RBP13.05□□□□□ -0.32
CHD7-209ENST00000529472 NR5A1Q13285 461 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 PGM5Q15124 567 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 SAFBQ15424 915 aaKnown RBP eCLIP13.05□□□□□ -0.32
CHD7-209ENST00000529472 PRAMEF19Q5SWL8 479 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 IFFO2Q5TF58 517 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 EEPD1Q7L9B9 569 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 FBXO16Q8IX29 292 aaPredicted RBP13.05□□□□□ -0.32
CHD7-209ENST00000529472 DIS3L2Q8IYB7 885 aaKnown RBP13.05□□□□□ -0.32
CHD7-209ENST00000529472 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
CHD7-209ENST00000529472 FBXO18Q8NFZ0 1043 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 ZFP91Q96JP5 570 aaPredicted RBP13.05□□□□□ -0.32
CHD7-209ENST00000529472 IWS1Q96ST2 819 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 PDCD2LQ9BRP1 358 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 EHMT1Q9H9B1 1298 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 ZHX1Q9UKY1 873 aaPredicted RBP13.05□□□□□ -0.32
CHD7-209ENST00000529472 CNPY2Q9Y2B0 182 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 RPTORQ8N122 1335 aa13.05□□□□□ -0.32
CHD7-209ENST00000529472 MYH7BA7E2Y1 1941 aa13.04□□□□□ -0.32
CHD7-209ENST00000529472 LOC102724159A0A0B4J2E5 919 aa13.04□□□□□ -0.32
CHD7-209ENST00000529472 M0R2N6 131 aa13.04□□□□□ -0.32
CHD7-209ENST00000529472 SNAI1O95863 264 aaPredicted RBP13.04□□□□□ -0.32
CHD7-209ENST00000529472 IGHA2P01877 340 aa13.04□□□□□ -0.32
CHD7-209ENST00000529472 NR3C2P08235 984 aa13.04□□□□□ -0.32
CHD7-209ENST00000529472 CCND2P30279 289 aa13.04□□□□□ -0.32
CHD7-209ENST00000529472 CACNB2Q08289 660 aaPredicted RBP13.04□□□□□ -0.32
CHD7-209ENST00000529472 PWP2Q15269 919 aaKnown RBP13.04□□□□□ -0.32
CHD7-209ENST00000529472 LARP1BQ659C4 914 aaKnown RBP13.04□□□□□ -0.32
CHD7-209ENST00000529472 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
CHD7-209ENST00000529472 CCDC194A0A1B0GVG4 234 aa13.03□□□□□ -0.32
CHD7-209ENST00000529472 VPS37CA5D8V6 355 aaPredicted RBP13.03□□□□□ -0.32
CHD7-209ENST00000529472 BTBD18B2RXH4 712 aa13.03□□□□□ -0.32
CHD7-209ENST00000529472 CYBAP13498 195 aa13.03□□□□□ -0.32
CHD7-209ENST00000529472 CNGA1P29973 690 aa13.03□□□□□ -0.32
CHD7-209ENST00000529472 CCND3P30281 292 aaPredicted RBP13.03□□□□□ -0.32
CHD7-209ENST00000529472 SREBF1P36956 1147 aa13.03□□□□□ -0.32
CHD7-209ENST00000529472 ACVR2BQ13705 512 aa13.03□□□□□ -0.32
CHD7-209ENST00000529472 GNL2Q13823 731 aaKnown RBP13.03□□□□□ -0.32
CHD7-209ENST00000529472 STXBP2Q15833 593 aa13.03□□□□□ -0.32
CHD7-209ENST00000529472 MAP3K21Q5TCX8 1036 aa13.03□□□□□ -0.32
CHD7-209ENST00000529472 MCTP2Q6DN12 878 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms