RNA–Protein interactions for RNA: ENST00000528932.1

TRIM3-207, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-207ENST00000528932 FTOQ9C0B1 505 aaKnown RBP eCLIP14.74□□□□□ -0.05
TRIM3-207ENST00000528932 UBA5Q9GZZ9 404 aa14.74□□□□□ -0.05
TRIM3-207ENST00000528932 TCP11L1Q9NUJ3 509 aa14.74□□□□□ -0.05
TRIM3-207ENST00000528932 PRRC2BQ5JSZ5 2229 aaKnown RBP14.73□□□□□ -0.05
TRIM3-207ENST00000528932 RAD50Q92878 1312 aa14.73□□□□□ -0.05
TRIM3-207ENST00000528932 MYH7BA7E2Y1 1941 aa14.73□□□□□ -0.05
TRIM3-207ENST00000528932 KIAA1217Q5T5P2 1943 aa14.73□□□□□ -0.05
TRIM3-207ENST00000528932 TRIM6-TRIM34B2RNG4 842 aa14.73□□□□□ -0.05
TRIM3-207ENST00000528932 ARIH2O95376 493 aa14.73□□□□□ -0.05
TRIM3-207ENST00000528932 TXNP10599 105 aaKnown RBP14.73□□□□□ -0.05
TRIM3-207ENST00000528932 TFF2Q03403 129 aa14.73□□□□□ -0.05
TRIM3-207ENST00000528932 BRDTQ58F21 947 aaPredicted RBP14.73□□□□□ -0.05
TRIM3-207ENST00000528932 TMEM67Q5HYA8 995 aa14.73□□□□□ -0.05
TRIM3-207ENST00000528932 KRT40Q6A162 431 aa14.73□□□□□ -0.05
TRIM3-207ENST00000528932 MFSD6Q6ZSS7 791 aa14.73□□□□□ -0.05
TRIM3-207ENST00000528932 RWDD1Q9H446 243 aaPredicted RBP14.73□□□□□ -0.05
TRIM3-207ENST00000528932 NEDD4P46934 1319 aa14.72□□□□□ -0.05
TRIM3-207ENST00000528932 CCDC171Q6TFL3 1326 aa14.72□□□□□ -0.05
TRIM3-207ENST00000528932 CHD7Q9P2D1 2997 aa14.72□□□□□ -0.05
TRIM3-207ENST00000528932 EPOPA6NHQ4 379 aa14.72□□□□□ -0.05
TRIM3-207ENST00000528932 ARHGEF15O94989 841 aa14.72□□□□□ -0.05
TRIM3-207ENST00000528932 ACTN1P12814 892 aa14.72□□□□□ -0.05
TRIM3-207ENST00000528932 HDAC1Q13547 482 aaPredicted RBP14.72□□□□□ -0.05
TRIM3-207ENST00000528932 RETREG2Q8NC44 543 aa14.72□□□□□ -0.05
TRIM3-207ENST00000528932 SCFD2Q8WU76 684 aa14.72□□□□□ -0.05
TRIM3-207ENST00000528932 TBC1D5Q92609 795 aa14.72□□□□□ -0.05
TRIM3-207ENST00000528932 MPHOSPH6Q99547 160 aaKnown RBP14.72□□□□□ -0.05
TRIM3-207ENST00000528932 NOD1Q9Y239 953 aa14.72□□□□□ -0.05
TRIM3-207ENST00000528932 LAMA4Q16363 1823 aa14.71□□□□□ -0.05
TRIM3-207ENST00000528932 LOC102724159A0A0B4J2E5 919 aa14.71□□□□□ -0.05
TRIM3-207ENST00000528932 NKRFO15226 690 aaKnown RBP eCLIP14.71□□□□□ -0.05
TRIM3-207ENST00000528932 PFKMP08237 780 aa14.71□□□□□ -0.05
TRIM3-207ENST00000528932 IQCF3P0C7M6 154 aa14.71□□□□□ -0.05
TRIM3-207ENST00000528932 EDNRBP24530 442 aa14.71□□□□□ -0.05
TRIM3-207ENST00000528932 PWP2Q15269 919 aaKnown RBP14.71□□□□□ -0.05
TRIM3-207ENST00000528932 SEPT14Q6ZU15 432 aa14.71□□□□□ -0.05
TRIM3-207ENST00000528932 CHST3Q7LGC8 479 aa14.71□□□□□ -0.05
TRIM3-207ENST00000528932 ARNTL2Q8WYA1 636 aa14.71□□□□□ -0.05
TRIM3-207ENST00000528932 LNPKQ9C0E8 428 aa14.71□□□□□ -0.05
TRIM3-207ENST00000528932 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
TRIM3-207ENST00000528932 COL4A4P53420 1690 aaPredicted RBP14.71□□□□□ -0.06
TRIM3-207ENST00000528932 WDR19Q8NEZ3 1342 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 A6NJR5 290 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 SNHG28P0DPA3 235 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 KCNQ1P51787 676 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 CDC37Q16543 378 aaPredicted RBP14.7□□□□□ -0.06
TRIM3-207ENST00000528932 PTGISQ16647 500 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 LY6KQ17RY6 165 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 NFRKBQ6P4R8 1299 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 SPRED2Q7Z698 418 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 TMCO2Q7Z6W1 182 aaPredicted RBP14.7□□□□□ -0.06
TRIM3-207ENST00000528932 DNERQ8NFT8 737 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 AFG1LQ8WV93 481 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 TTC14Q96N46 770 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 TAAR1Q96RJ0 339 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 COL20A1Q9P218 1284 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 REV3LO60673 3130 aa14.7□□□□□ -0.06
TRIM3-207ENST00000528932 KPNA6O60684 536 aa14.69□□□□□ -0.06
TRIM3-207ENST00000528932 MMP3P08254 477 aa14.69□□□□□ -0.06
TRIM3-207ENST00000528932 RFC2P35250 354 aa14.69□□□□□ -0.06
TRIM3-207ENST00000528932 BFSP2Q13515 415 aa14.69□□□□□ -0.06
TRIM3-207ENST00000528932 GDF6Q6KF10 455 aaPredicted RBP14.69□□□□□ -0.06
TRIM3-207ENST00000528932 B4GALNT3Q6L9W6 998 aa14.69□□□□□ -0.06
TRIM3-207ENST00000528932 HERC6Q8IVU3 1022 aa14.69□□□□□ -0.06
TRIM3-207ENST00000528932 ESR2Q92731 530 aa14.69□□□□□ -0.06
TRIM3-207ENST00000528932 SLC9A7Q96T83 725 aa14.69□□□□□ -0.06
TRIM3-207ENST00000528932 VAT1LQ9HCJ6 419 aa14.69□□□□□ -0.06
TRIM3-207ENST00000528932 PNMA2Q9UL42 364 aa14.69□□□□□ -0.06
TRIM3-207ENST00000528932 MTCH2Q9Y6C9 303 aa14.69□□□□□ -0.06
TRIM3-207ENST00000528932 ZMYM6O95789 1325 aa14.68□□□□□ -0.06
TRIM3-207ENST00000528932 B4DLN1 442 aa14.68□□□□□ -0.06
TRIM3-207ENST00000528932 GTPBP6O43824 516 aaPredicted RBP14.68□□□□□ -0.06
TRIM3-207ENST00000528932 DHX16O60231 1041 aaKnown RBP14.68□□□□□ -0.06
TRIM3-207ENST00000528932 SORBS3O60504 671 aa14.68□□□□□ -0.06
TRIM3-207ENST00000528932 KDM4AO75164 1064 aa14.68□□□□□ -0.06
TRIM3-207ENST00000528932 SDSP20132 328 aa14.68□□□□□ -0.06
TRIM3-207ENST00000528932 MRPL12P52815 198 aaKnown RBP14.68□□□□□ -0.06
TRIM3-207ENST00000528932 TAP1Q03518 808 aa14.68□□□□□ -0.06
TRIM3-207ENST00000528932 GPATCH4Q5T3I0 446 aaKnown RBP14.68□□□□□ -0.06
TRIM3-207ENST00000528932 ADGRF4Q8IZF3 695 aa14.68□□□□□ -0.06
TRIM3-207ENST00000528932 PNMA1Q8ND90 353 aa14.68□□□□□ -0.06
TRIM3-207ENST00000528932 SYTL5Q8TDW5 730 aaPredicted RBP14.68□□□□□ -0.06
TRIM3-207ENST00000528932 RNF41Q9H4P4 317 aaPredicted RBP14.68□□□□□ -0.06
TRIM3-207ENST00000528932 MUC3AQ02505 3323 aa14.67□□□□□ -0.06
TRIM3-207ENST00000528932 B4E1Z4 1266 aa14.67□□□□□ -0.06
TRIM3-207ENST00000528932 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
TRIM3-207ENST00000528932 ZNF213O14771 459 aa14.67□□□□□ -0.06
TRIM3-207ENST00000528932 GH1P01241 217 aa14.67□□□□□ -0.06
TRIM3-207ENST00000528932 BMP1P13497 986 aa14.67□□□□□ -0.06
TRIM3-207ENST00000528932 EIF2AK2P19525 551 aaKnown RBP14.67□□□□□ -0.06
TRIM3-207ENST00000528932 KCNJ6P48051 423 aa14.67□□□□□ -0.06
TRIM3-207ENST00000528932 PTPN11Q06124 597 aaPredicted RBP14.67□□□□□ -0.06
TRIM3-207ENST00000528932 ARHGAP1Q07960 439 aa14.67□□□□□ -0.06
TRIM3-207ENST00000528932 CCDC62Q6P9F0 684 aa14.67□□□□□ -0.06
TRIM3-207ENST00000528932 CWC27Q6UX04 472 aaKnown RBP14.67□□□□□ -0.06
TRIM3-207ENST00000528932 ALG1Q9BT22 464 aa14.67□□□□□ -0.06
TRIM3-207ENST00000528932 KAT14Q9H8E8 782 aa14.67□□□□□ -0.06
TRIM3-207ENST00000528932 SUPT16HQ9Y5B9 1047 aaKnown RBP14.67□□□□□ -0.06
TRIM3-207ENST00000528932 ABCB11O95342 1321 aa14.66□□□□□ -0.06
TRIM3-207ENST00000528932 LCHNA4D1U4 455 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms