RNA–Protein interactions for RNA: ENST00000528588.5

VPS51-206, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-206ENST00000528588 RILPL2Q969X0 211 aa23.37■■□□□ 1.33
VPS51-206ENST00000528588 SLC9A7Q96T83 725 aa23.37■■□□□ 1.33
VPS51-206ENST00000528588 ARNTL2Q8WYA1 636 aa23.36■■□□□ 1.33
VPS51-206ENST00000528588 RANBP17Q9H2T7 1088 aaKnown RBP23.36■■□□□ 1.33
VPS51-206ENST00000528588 TCP11L1Q9NUJ3 509 aa23.36■■□□□ 1.33
VPS51-206ENST00000528588 TET1Q8NFU7 2136 aa23.35■■□□□ 1.33
VPS51-206ENST00000528588 LOC102724159A0A0B4J2E5 919 aa23.35■■□□□ 1.33
VPS51-206ENST00000528588 RBM47A0AV96 593 aaKnown RBP23.35■■□□□ 1.33
VPS51-206ENST00000528588 PWP2Q15269 919 aaKnown RBP23.35■■□□□ 1.33
VPS51-206ENST00000528588 NBPF20Q3BBV1 942 aa23.35■■□□□ 1.33
VPS51-206ENST00000528588 KRT40Q6A162 431 aa23.35■■□□□ 1.33
VPS51-206ENST00000528588 RETREG2Q8NC44 543 aa23.35■■□□□ 1.33
VPS51-206ENST00000528588 PHOSPHO2Q8TCD6 241 aa23.35■■□□□ 1.33
VPS51-206ENST00000528588 PPP1R13LQ8WUF5 828 aa23.35■■□□□ 1.33
VPS51-206ENST00000528588 FTOQ9C0B1 505 aaKnown RBP eCLIP23.35■■□□□ 1.33
VPS51-206ENST00000528588 COG5Q9UP83 839 aa23.35■■□□□ 1.33
VPS51-206ENST00000528588 TRIP12Q14669 1992 aaPredicted RBP23.34■■□□□ 1.33
VPS51-206ENST00000528588 PTPDC1A2A3K4 754 aa23.34■■□□□ 1.33
VPS51-206ENST00000528588 NFIBO00712 420 aa23.34■■□□□ 1.33
VPS51-206ENST00000528588 PCP11498 1178 aaKnown RBP23.34■■□□□ 1.33
VPS51-206ENST00000528588 SLC16A2P36021 539 aa23.34■■□□□ 1.33
VPS51-206ENST00000528588 MFAP1P55081 439 aaKnown RBP23.34■■□□□ 1.33
VPS51-206ENST00000528588 TAP1Q03518 808 aa23.34■■□□□ 1.33
VPS51-206ENST00000528588 BRDTQ58F21 947 aaPredicted RBP23.34■■□□□ 1.33
VPS51-206ENST00000528588 TTBK2Q6IQ55 1244 aa23.34■■□□□ 1.33
VPS51-206ENST00000528588 HERC6Q8IVU3 1022 aa23.34■■□□□ 1.33
VPS51-206ENST00000528588 DCAF4Q8WV16 495 aa23.34■■□□□ 1.33
VPS51-206ENST00000528588 RAD50Q92878 1312 aa23.33■■□□□ 1.33
VPS51-206ENST00000528588 COL4A4P53420 1690 aaPredicted RBP23.33■■□□□ 1.33
VPS51-206ENST00000528588 PITPNM1O00562 1244 aa23.33■■□□□ 1.33
VPS51-206ENST00000528588 ARHGEF15O94989 841 aa23.33■■□□□ 1.33
VPS51-206ENST00000528588 IQCF3P0C7M6 154 aa23.33■■□□□ 1.33
VPS51-206ENST00000528588 NFRKBQ6P4R8 1299 aa23.33■■□□□ 1.33
VPS51-206ENST00000528588 SLC30A10Q6XR72 485 aa23.33■■□□□ 1.33
VPS51-206ENST00000528588 PTPRSQ13332 1948 aa23.33■■□□□ 1.32
VPS51-206ENST00000528588 KIF28PB7ZC32 967 aa23.32■■□□□ 1.32
VPS51-206ENST00000528588 TOP1P11387 765 aaKnown RBP23.32■■□□□ 1.32
VPS51-206ENST00000528588 CALML3P27482 149 aa23.32■■□□□ 1.32
VPS51-206ENST00000528588 PPP2R5BQ15173 497 aa23.32■■□□□ 1.32
VPS51-206ENST00000528588 SYDE2Q5VT97 1194 aa23.32■■□□□ 1.32
VPS51-206ENST00000528588 EPHX3Q9H6B9 360 aa23.32■■□□□ 1.32
VPS51-206ENST00000528588 TOMM22Q9NS69 142 aa23.32■■□□□ 1.32
VPS51-206ENST00000528588 NKRFO15226 690 aaKnown RBP eCLIP23.31■■□□□ 1.32
VPS51-206ENST00000528588 KPNA6O60684 536 aa23.31■■□□□ 1.32
VPS51-206ENST00000528588 HAND2P61296 217 aa23.31■■□□□ 1.32
VPS51-206ENST00000528588 PDE4DQ08499 809 aa23.31■■□□□ 1.32
VPS51-206ENST00000528588 RRP12Q5JTH9 1297 aaKnown RBP23.31■■□□□ 1.32
VPS51-206ENST00000528588 BTNL9Q6UXG8 535 aa23.31■■□□□ 1.32
VPS51-206ENST00000528588 TMEM47Q9BQJ4 181 aa23.31■■□□□ 1.32
VPS51-206ENST00000528588 NOD1Q9Y239 953 aa23.31■■□□□ 1.32
VPS51-206ENST00000528588 SUPT16HQ9Y5B9 1047 aaKnown RBP23.31■■□□□ 1.32
VPS51-206ENST00000528588 FRMPD2Q68DX3 1309 aaPredicted RBP23.31■■□□□ 1.32
VPS51-206ENST00000528588 TLL1O43897 1013 aa23.3■■□□□ 1.32
VPS51-206ENST00000528588 PTPN11Q06124 597 aaPredicted RBP23.3■■□□□ 1.32
VPS51-206ENST00000528588 GRB10Q13322 594 aa23.3■■□□□ 1.32
VPS51-206ENST00000528588 BFSP2Q13515 415 aa23.3■■□□□ 1.32
VPS51-206ENST00000528588 RNF207Q6ZRF8 634 aa23.3■■□□□ 1.32
VPS51-206ENST00000528588 MFSD6Q6ZSS7 791 aa23.3■■□□□ 1.32
VPS51-206ENST00000528588 TBC1D10CQ8IV04 446 aa23.3■■□□□ 1.32
VPS51-206ENST00000528588 SCFD2Q8WU76 684 aa23.3■■□□□ 1.32
VPS51-206ENST00000528588 CLEC4DQ8WXI8 215 aa23.3■■□□□ 1.32
VPS51-206ENST00000528588 HLA-CQ95604 372 aa23.3■■□□□ 1.32
VPS51-206ENST00000528588 TTC14Q96N46 770 aa23.3■■□□□ 1.32
VPS51-206ENST00000528588 LRFN3Q9BTN0 628 aa23.3■■□□□ 1.32
VPS51-206ENST00000528588 GPCPD1Q9NPB8 672 aa23.3■■□□□ 1.32
VPS51-206ENST00000528588 A6NJR5 290 aa23.29■■□□□ 1.32
VPS51-206ENST00000528588 HIP1O00291 1037 aa23.29■■□□□ 1.32
VPS51-206ENST00000528588 BAIAP3O94812 1187 aa23.29■■□□□ 1.32
VPS51-206ENST00000528588 COPS5Q92905 334 aa23.29■■□□□ 1.32
VPS51-206ENST00000528588 MPHOSPH6Q99547 160 aaKnown RBP23.29■■□□□ 1.32
VPS51-206ENST00000528588 RNF41Q9H4P4 317 aaPredicted RBP23.29■■□□□ 1.32
VPS51-206ENST00000528588 HCN4Q9Y3Q4 1203 aa23.29■■□□□ 1.32
VPS51-206ENST00000528588 HOXD11P31277 338 aaPredicted RBP23.28■■□□□ 1.32
VPS51-206ENST00000528588 KCNJ6P48051 423 aa23.28■■□□□ 1.32
VPS51-206ENST00000528588 NT5C2P49902 561 aa23.28■■□□□ 1.32
VPS51-206ENST00000528588 CHMP4BP1P59074 171 aa23.28■■□□□ 1.32
VPS51-206ENST00000528588 CWC27Q6UX04 472 aaKnown RBP23.28■■□□□ 1.32
VPS51-206ENST00000528588 DIAPH3Q9NSV4 1193 aa23.28■■□□□ 1.32
VPS51-206ENST00000528588 BRWD1Q9NSI6 2320 aa23.28■■□□□ 1.32
VPS51-206ENST00000528588 TXNP10599 105 aaKnown RBP23.27■■□□□ 1.32
VPS51-206ENST00000528588 EDNRBP24530 442 aa23.27■■□□□ 1.32
VPS51-206ENST00000528588 RPS6P62753 249 aaKnown RBP23.27■■□□□ 1.32
VPS51-206ENST00000528588 SPRED2Q7Z698 418 aa23.27■■□□□ 1.32
VPS51-206ENST00000528588 ZNF213O14771 459 aa23.26■■□□□ 1.31
VPS51-206ENST00000528588 LPXNO60711 386 aa23.26■■□□□ 1.31
VPS51-206ENST00000528588 SNHG28P0DPA3 235 aa23.26■■□□□ 1.31
VPS51-206ENST00000528588 PDHBP11177 359 aa23.26■■□□□ 1.31
VPS51-206ENST00000528588 PTGISQ16647 500 aa23.26■■□□□ 1.31
VPS51-206ENST00000528588 TMEM31Q5JXX7 168 aa23.26■■□□□ 1.31
VPS51-206ENST00000528588 DSCC1Q9BVC3 393 aa23.26■■□□□ 1.31
VPS51-206ENST00000528588 PNMA2Q9UL42 364 aa23.26■■□□□ 1.31
VPS51-206ENST00000528588 ARIH1Q9Y4X5 557 aaPredicted RBP23.26■■□□□ 1.31
VPS51-206ENST00000528588 CCDC155Q8N6L0 562 aa23.25■■□□□ 1.31
VPS51-206ENST00000528588 DNERQ8NFT8 737 aa23.25■■□□□ 1.31
VPS51-206ENST00000528588 ESR2Q92731 530 aa23.25■■□□□ 1.31
VPS51-206ENST00000528588 NEDD4P46934 1319 aa23.25■■□□□ 1.31
VPS51-206ENST00000528588 LCHNA4D1U4 455 aa23.24■■□□□ 1.31
VPS51-206ENST00000528588 B4DLN1 442 aa23.24■■□□□ 1.31
VPS51-206ENST00000528588 PDE4AP27815 886 aa23.24■■□□□ 1.31
VPS51-206ENST00000528588 MRPL12P52815 198 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms