RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 MICU3Q86XE3 530 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 MB21D2Q8IYB1 491 aaPredicted RBP10.52□□□□□ -0.73
CMTM1-210ENST00000528441 TMTC2Q8N394 836 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 DNERQ8NFT8 737 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 CLEC4DQ8WXI8 215 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 CUL5Q93034 780 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 RRP36Q96EU6 259 aaKnown RBP10.52□□□□□ -0.73
CMTM1-210ENST00000528441 NEK1Q96PY6 1258 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 PIGSQ96S52 555 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 RMDN3Q96TC7 470 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 TMEM39AQ9NV64 488 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 MAD2L2Q9UI95 211 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 TAF6LQ9Y6J9 622 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 MKI67P46013 3256 aaKnown RBP10.52□□□□□ -0.73
CMTM1-210ENST00000528441 MROH7Q68CQ1 1323 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 LRRC37A2A6NM11 1700 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 GCOM1H8Y6P7 765 aaPredicted RBP10.51□□□□□ -0.73
CMTM1-210ENST00000528441 POLR2MP0CAP2 368 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 CALM1P0DP23 149 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 CALM2P0DP24 149 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 CALM3P0DP25 149 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 TXNP10599 105 aaKnown RBP10.51□□□□□ -0.73
CMTM1-210ENST00000528441 SMPD1P17405 629 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 CPT1AP50416 773 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 GJA9P57773 515 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 IRX5P78411 483 aaPredicted RBP10.51□□□□□ -0.73
CMTM1-210ENST00000528441 KRT32Q14532 448 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 TTLL4Q14679 1199 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 IER5LQ5T953 404 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 CXCL17Q6UXB2 119 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 CCDC82Q8N4S0 544 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 SMARCC2Q8TAQ2 1214 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 NSUN6Q8TEA1 469 aaKnown RBP10.51□□□□□ -0.73
CMTM1-210ENST00000528441 SCFD2Q8WU76 684 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 SENP2Q9HC62 589 aa10.51□□□□□ -0.73
CMTM1-210ENST00000528441 CEP290O15078 2479 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 LOC102724159A0A0B4J2E5 919 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 PALM3A6NDB9 673 aaPredicted RBP10.5□□□□□ -0.73
CMTM1-210ENST00000528441 SH2B2O14492 632 aaPredicted RBP10.5□□□□□ -0.73
CMTM1-210ENST00000528441 REC8O95072 547 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 IGHA2P01877 340 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 HOXA13P31271 388 aaPredicted RBP10.5□□□□□ -0.73
CMTM1-210ENST00000528441 ANTXR2P58335 489 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 PWP2Q15269 919 aaKnown RBP10.5□□□□□ -0.73
CMTM1-210ENST00000528441 STXBP2Q15833 593 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 TDHQ8IZJ6 230 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 SYTL5Q8TDW5 730 aaPredicted RBP10.5□□□□□ -0.73
CMTM1-210ENST00000528441 TBC1D5Q92609 795 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 BADQ92934 168 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 RNF25Q96BH1 459 aaPredicted RBP10.5□□□□□ -0.73
CMTM1-210ENST00000528441 TCEANC2Q96MN5 208 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 TAAR1Q96RJ0 339 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 PPP1R12CQ9BZL4 782 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 LY9Q9HBG7 655 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 POLR3EQ9NVU0 708 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 NOD1Q9Y239 953 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 MRVI1Q9Y6F6 885 aa10.5□□□□□ -0.73
CMTM1-210ENST00000528441 BAZ2BQ9UIF8 2168 aaKnown RBP10.49□□□□□ -0.73
CMTM1-210ENST00000528441 LCTP09848 1927 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 PNMA6FA0A0J9YX94 578 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 A0A1W2PPC1 479 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 RIOK3O14730 519 aaKnown RBP10.49□□□□□ -0.73
CMTM1-210ENST00000528441 NKRFO15226 690 aaKnown RBP eCLIP10.49□□□□□ -0.73
CMTM1-210ENST00000528441 ADCY6O43306 1168 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 SORBS3O60504 671 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 CABYRO75952 493 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 PTGS1P23219 599 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 CST5P28325 142 aaPredicted RBP10.49□□□□□ -0.73
CMTM1-210ENST00000528441 FXR1P51114 621 aaKnown RBP eCLIP10.49□□□□□ -0.73
CMTM1-210ENST00000528441 DUSP28Q4G0W2 176 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 CMTR1Q8N1G2 835 aaKnown RBP10.49□□□□□ -0.73
CMTM1-210ENST00000528441 KLHDC9Q8NEP7 349 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 JAKMIP1Q96N16 626 aaKnown RBP10.49□□□□□ -0.73
CMTM1-210ENST00000528441 LZTS2Q9BRK4 669 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 UPF3AQ9H1J1 476 aaKnown RBP10.49□□□□□ -0.73
CMTM1-210ENST00000528441 PDLIM7Q9NR12 457 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 PPP4R2Q9NY27 417 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 ASTN1O14525 1302 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 ELP1O95163 1332 aa10.49□□□□□ -0.73
CMTM1-210ENST00000528441 GOLGA8AA7E2F4 631 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 GOLGA8BA8MQT2 603 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 ARVCFO00192 962 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 ZBTB43O43298 467 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 PLEKHA8P1O95397 391 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 HMGB1P09429 215 aaKnown RBP10.48□□□□□ -0.73
CMTM1-210ENST00000528441 CCND2P30279 289 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 PSMC6P62333 389 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 TROAPQ12815 778 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 ITGA7Q13683 1181 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 NECTIN1Q15223 517 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 RTN1Q16799 776 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 TAPT1Q6NXT6 567 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 BLOC1S2Q6QNY1 142 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 HEATR3Q7Z4Q2 680 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 SH3RF1Q7Z6J0 888 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 RGS22Q8NE09 1264 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 IGDCC4Q8TDY8 1250 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 COPS5Q92905 334 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 IWS1Q96ST2 819 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 GDF15Q99988 308 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms