RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 MSRAQ9UJ68 235 aa26.15■■□□□ 1.78
TRAPPC4-208ENST00000527680 MYO9BQ13459 2157 aa26.14■■□□□ 1.78
TRAPPC4-208ENST00000527680 TNKSO95271 1327 aa26.14■■□□□ 1.78
TRAPPC4-208ENST00000527680 ABCB11O95342 1321 aa26.14■■□□□ 1.78
TRAPPC4-208ENST00000527680 CHMP4BP1P59074 171 aa26.14■■□□□ 1.78
TRAPPC4-208ENST00000527680 TTLL4Q14679 1199 aa26.14■■□□□ 1.78
TRAPPC4-208ENST00000527680 MCF2L2Q86YR7 1114 aa26.14■■□□□ 1.78
TRAPPC4-208ENST00000527680 COPS5Q92905 334 aa26.14■■□□□ 1.78
TRAPPC4-208ENST00000527680 KPNA6O60684 536 aa26.13■■□□□ 1.77
TRAPPC4-208ENST00000527680 CYP2C9P11712 490 aa26.13■■□□□ 1.77
TRAPPC4-208ENST00000527680 EDNRBP24530 442 aa26.13■■□□□ 1.77
TRAPPC4-208ENST00000527680 SCLYQ96I15 445 aa26.13■■□□□ 1.77
TRAPPC4-208ENST00000527680 TAAR1Q96RJ0 339 aa26.13■■□□□ 1.77
TRAPPC4-208ENST00000527680 CXXC1Q9P0U4 656 aaPredicted RBP26.13■■□□□ 1.77
TRAPPC4-208ENST00000527680 NBPF20Q3BBV1 942 aa26.12■■□□□ 1.77
TRAPPC4-208ENST00000527680 IFIT1BQ5T764 474 aaKnown RBP26.12■■□□□ 1.77
TRAPPC4-208ENST00000527680 SEPT14Q6ZU15 432 aa26.12■■□□□ 1.77
TRAPPC4-208ENST00000527680 FBXO11Q86XK2 927 aa26.12■■□□□ 1.77
TRAPPC4-208ENST00000527680 NSUN6Q8TEA1 469 aaKnown RBP26.12■■□□□ 1.77
TRAPPC4-208ENST00000527680 WNT8AQ9H1J5 351 aa26.12■■□□□ 1.77
TRAPPC4-208ENST00000527680 MRPL11Q9Y3B7 192 aaKnown RBP26.12■■□□□ 1.77
TRAPPC4-208ENST00000527680 SUPT16HQ9Y5B9 1047 aaKnown RBP26.12■■□□□ 1.77
TRAPPC4-208ENST00000527680 RAB30Q15771 203 aa26.11■■□□□ 1.77
TRAPPC4-208ENST00000527680 QRICH1Q2TAL8 776 aa26.11■■□□□ 1.77
TRAPPC4-208ENST00000527680 PPP1R13LQ8WUF5 828 aa26.11■■□□□ 1.77
TRAPPC4-208ENST00000527680 GAS2L1Q99501 681 aaPredicted RBP26.11■■□□□ 1.77
TRAPPC4-208ENST00000527680 UNC80Q8N2C7 3258 aa26.11■■□□□ 1.77
TRAPPC4-208ENST00000527680 A6NJR5 290 aa26.1■■□□□ 1.77
TRAPPC4-208ENST00000527680 ZBBXA8MT70 800 aa26.1■■□□□ 1.77
TRAPPC4-208ENST00000527680 TRDNQ13061 729 aa26.1■■□□□ 1.77
TRAPPC4-208ENST00000527680 STXBP2Q15833 593 aa26.1■■□□□ 1.77
TRAPPC4-208ENST00000527680 SYTL5Q8TDW5 730 aaPredicted RBP26.1■■□□□ 1.77
TRAPPC4-208ENST00000527680 RMDN3Q96TC7 470 aa26.1■■□□□ 1.77
TRAPPC4-208ENST00000527680 MAF1Q9H063 256 aa26.1■■□□□ 1.77
TRAPPC4-208ENST00000527680 JMJD4Q9H9V9 463 aa26.1■■□□□ 1.77
TRAPPC4-208ENST00000527680 SLC4A7Q9Y6M7 1214 aa26.1■■□□□ 1.77
TRAPPC4-208ENST00000527680 MYH6P13533 1939 aa26.1■■□□□ 1.77
TRAPPC4-208ENST00000527680 LAMA4Q16363 1823 aa26.09■■□□□ 1.77
TRAPPC4-208ENST00000527680 CUL9Q8IWT3 2517 aa26.09■■□□□ 1.77
TRAPPC4-208ENST00000527680 ARHGEF16Q5VV41 709 aa26.09■■□□□ 1.77
TRAPPC4-208ENST00000527680 DEFB128Q7Z7B8 93 aa26.09■■□□□ 1.77
TRAPPC4-208ENST00000527680 RETREG2Q8NC44 543 aa26.09■■□□□ 1.77
TRAPPC4-208ENST00000527680 SLC28A3Q9HAS3 691 aa26.09■■□□□ 1.77
TRAPPC4-208ENST00000527680 NOD1Q9Y239 953 aa26.09■■□□□ 1.77
TRAPPC4-208ENST00000527680 ARIH2O95376 493 aa26.08■■□□□ 1.77
TRAPPC4-208ENST00000527680 CFBP00751 764 aa26.08■■□□□ 1.77
TRAPPC4-208ENST00000527680 NFRKBQ6P4R8 1299 aa26.08■■□□□ 1.77
TRAPPC4-208ENST00000527680 CHST3Q7LGC8 479 aa26.08■■□□□ 1.77
TRAPPC4-208ENST00000527680 PPM1EQ8WY54 764 aa26.08■■□□□ 1.77
TRAPPC4-208ENST00000527680 IWS1Q96ST2 819 aa26.08■■□□□ 1.77
TRAPPC4-208ENST00000527680 PRDM12Q9H4Q4 367 aa26.08■■□□□ 1.77
TRAPPC4-208ENST00000527680 KLRF2D3W0D1 207 aa26.07■■□□□ 1.76
TRAPPC4-208ENST00000527680 LY6KQ17RY6 165 aa26.07■■□□□ 1.76
TRAPPC4-208ENST00000527680 STAG2Q8N3U4 1231 aa26.07■■□□□ 1.76
TRAPPC4-208ENST00000527680 AFG1LQ8WV93 481 aa26.07■■□□□ 1.76
TRAPPC4-208ENST00000527680 RUFY2Q8WXA3 655 aa26.07■■□□□ 1.76
TRAPPC4-208ENST00000527680 AMNQ9BXJ7 453 aa26.07■■□□□ 1.76
TRAPPC4-208ENST00000527680 NKX2-4Q9H2Z4 354 aa26.07■■□□□ 1.76
TRAPPC4-208ENST00000527680 COL20A1Q9P218 1284 aa26.07■■□□□ 1.76
TRAPPC4-208ENST00000527680 GH1P01241 217 aa26.06■■□□□ 1.76
TRAPPC4-208ENST00000527680 EIF2AK2P19525 551 aaKnown RBP26.06■■□□□ 1.76
TRAPPC4-208ENST00000527680 TTC22Q5TAA0 569 aa26.06■■□□□ 1.76
TRAPPC4-208ENST00000527680 CCDC62Q6P9F0 684 aa26.06■■□□□ 1.76
TRAPPC4-208ENST00000527680 IL25Q9H293 177 aa26.06■■□□□ 1.76
TRAPPC4-208ENST00000527680 CDH23Q9H251 3354 aa26.06■■□□□ 1.76
TRAPPC4-208ENST00000527680 PDE4AP27815 886 aa26.05■■□□□ 1.76
TRAPPC4-208ENST00000527680 RABGGTBP53611 331 aa26.05■■□□□ 1.76
TRAPPC4-208ENST00000527680 PTPN11Q06124 597 aaPredicted RBP26.05■■□□□ 1.76
TRAPPC4-208ENST00000527680 CYB5R4Q7L1T6 521 aa26.05■■□□□ 1.76
TRAPPC4-208ENST00000527680 U3KPZ7 1027 aaPredicted RBP26.05■■□□□ 1.76
TRAPPC4-208ENST00000527680 PFKMP08237 780 aa26.04■■□□□ 1.76
TRAPPC4-208ENST00000527680 ACTN1P12814 892 aa26.04■■□□□ 1.76
TRAPPC4-208ENST00000527680 GSPT1P15170 499 aaKnown RBP26.04■■□□□ 1.76
TRAPPC4-208ENST00000527680 IGFBP4P22692 258 aa26.04■■□□□ 1.76
TRAPPC4-208ENST00000527680 FTOQ9C0B1 505 aaKnown RBP eCLIP26.04■■□□□ 1.76
TRAPPC4-208ENST00000527680 EYSQ5T1H1 3165 aa26.04■■□□□ 1.76
TRAPPC4-208ENST00000527680 ERICH2A1L162 156 aa26.03■■□□□ 1.76
TRAPPC4-208ENST00000527680 EIF3JO75822 258 aaKnown RBP26.03■■□□□ 1.76
TRAPPC4-208ENST00000527680 NR3C2P08235 984 aa26.03■■□□□ 1.76
TRAPPC4-208ENST00000527680 CASTP20810 708 aaKnown RBP26.03■■□□□ 1.76
TRAPPC4-208ENST00000527680 BFSP2Q13515 415 aa26.03■■□□□ 1.76
TRAPPC4-208ENST00000527680 SEC23AQ15436 765 aa26.03■■□□□ 1.76
TRAPPC4-208ENST00000527680 YBX2Q9Y2T7 364 aaKnown RBP26.03■■□□□ 1.76
TRAPPC4-208ENST00000527680 PCDHA1Q9Y5I3 950 aa26.03■■□□□ 1.76
TRAPPC4-208ENST00000527680 SCN10AQ9Y5Y9 1956 aa26.03■■□□□ 1.76
TRAPPC4-208ENST00000527680 IFIT3O14879 490 aaKnown RBP26.02■■□□□ 1.76
TRAPPC4-208ENST00000527680 MMP3P08254 477 aa26.02■■□□□ 1.76
TRAPPC4-208ENST00000527680 MYCLP12524 364 aaPredicted RBP26.02■■□□□ 1.76
TRAPPC4-208ENST00000527680 ATP2A2P16615 1042 aaKnown RBP26.02■■□□□ 1.76
TRAPPC4-208ENST00000527680 PTGISQ16647 500 aa26.02■■□□□ 1.76
TRAPPC4-208ENST00000527680 PXMP2Q9NR77 195 aa26.02■■□□□ 1.76
TRAPPC4-208ENST00000527680 MAD2L2Q9UI95 211 aa26.02■■□□□ 1.76
TRAPPC4-208ENST00000527680 MRVI1Q9Y6F6 885 aa26.02■■□□□ 1.76
TRAPPC4-208ENST00000527680 ZBTB5O15062 677 aa26.01■■□□□ 1.75
TRAPPC4-208ENST00000527680 IQCF3P0C7M6 154 aa26.01■■□□□ 1.75
TRAPPC4-208ENST00000527680 ARHGAP1Q07960 439 aa26.01■■□□□ 1.75
TRAPPC4-208ENST00000527680 DGKDQ16760 1214 aa26.01■■□□□ 1.75
TRAPPC4-208ENST00000527680 RALYLQ86SE5 291 aaKnown RBP26.01■■□□□ 1.75
TRAPPC4-208ENST00000527680 HOMER1Q86YM7 354 aa26.01■■□□□ 1.75
TRAPPC4-208ENST00000527680 USP38Q8NB14 1042 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms