RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 FAM129BQ96TA1 746 aa7.03□□□□□ -1.28
SF3B2-205ENST00000526653 ARHGAP39Q9C0H5 1083 aa7.03□□□□□ -1.28
SF3B2-205ENST00000526653 NPHS2Q9NP85 383 aa7.03□□□□□ -1.28
SF3B2-205ENST00000526653 MTMR10Q9NXD2 777 aa7.03□□□□□ -1.28
SF3B2-205ENST00000526653 ADGRE2Q9UHX3 823 aa7.03□□□□□ -1.28
SF3B2-205ENST00000526653 LAMA3Q16787 3333 aa7.03□□□□□ -1.28
SF3B2-205ENST00000526653 SH3TC1Q8TE82 1336 aa7.02□□□□□ -1.28
SF3B2-205ENST00000526653 FAM170BA6NMN3 283 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 CPNE3O75131 537 aaKnown RBP7.02□□□□□ -1.29
SF3B2-205ENST00000526653 ZBTB48P10074 688 aaPredicted RBP7.02□□□□□ -1.29
SF3B2-205ENST00000526653 ITPKAP23677 461 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 TXKP42681 527 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 EIF4A1P60842 406 aaKnown RBP7.02□□□□□ -1.29
SF3B2-205ENST00000526653 HP1BP3Q5SSJ5 553 aaPredicted RBP7.02□□□□□ -1.29
SF3B2-205ENST00000526653 DYMQ7RTS9 669 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 ABI1Q8IZP0 508 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 GATA6Q92908 595 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 SHISA4Q96DD7 197 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 CORO1BQ9BR76 489 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 DEFB129Q9H1M3 183 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 RAD18Q9NS91 495 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 FAM105AQ9NUU6 356 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 BIN2Q9UBW5 565 aaPredicted RBP7.02□□□□□ -1.29
SF3B2-205ENST00000526653 CCDC39Q9UFE4 941 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 RAPGEFL1Q9UHV5 662 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 IBTKQ9P2D0 1353 aaPredicted RBP7.02□□□□□ -1.29
SF3B2-205ENST00000526653 UBR2Q8IWV8 1755 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 PAPPA2Q9BXP8 1791 aa7.02□□□□□ -1.29
SF3B2-205ENST00000526653 A0A1W2PPC1 479 aa7.01□□□□□ -1.29
SF3B2-205ENST00000526653 CYP26A1O43174 497 aa7.01□□□□□ -1.29
SF3B2-205ENST00000526653 USP2O75604 605 aaPredicted RBP7.01□□□□□ -1.29
SF3B2-205ENST00000526653 PRNPP04156 253 aa7.01□□□□□ -1.29
SF3B2-205ENST00000526653 MAP7Q14244 749 aa7.01□□□□□ -1.29
SF3B2-205ENST00000526653 SF3B3Q15393 1217 aaKnown RBP7.01□□□□□ -1.29
SF3B2-205ENST00000526653 TAF1CQ15572 869 aaPredicted RBP7.01□□□□□ -1.29
SF3B2-205ENST00000526653 PROSER3Q2NL68 480 aa7.01□□□□□ -1.29
SF3B2-205ENST00000526653 SEMA6CQ9H3T2 930 aa7.01□□□□□ -1.29
SF3B2-205ENST00000526653 ACSS3Q9H6R3 686 aa7.01□□□□□ -1.29
SF3B2-205ENST00000526653 ZFYVE1Q9HBF4 777 aa7.01□□□□□ -1.29
SF3B2-205ENST00000526653 AP4E1Q9UPM8 1137 aa7.01□□□□□ -1.29
SF3B2-205ENST00000526653 VCANP13611 3396 aa7.01□□□□□ -1.29
SF3B2-205ENST00000526653 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7□□□□□ -1.29
SF3B2-205ENST00000526653 EIF1AYO14602 144 aaKnown RBP7□□□□□ -1.29
SF3B2-205ENST00000526653 GPR182O15218 404 aa7□□□□□ -1.29
SF3B2-205ENST00000526653 HTATSF1O43719 755 aaKnown RBP7□□□□□ -1.29
SF3B2-205ENST00000526653 U2AF1L5P0DN76 240 aaPredicted RBP7□□□□□ -1.29
SF3B2-205ENST00000526653 HSPA5P11021 654 aaKnown RBP7□□□□□ -1.29
SF3B2-205ENST00000526653 CCL5P13501 91 aa7□□□□□ -1.29
SF3B2-205ENST00000526653 GJA8P48165 433 aa7□□□□□ -1.29
SF3B2-205ENST00000526653 U2AF1Q01081 240 aaKnown RBP eCLIP7□□□□□ -1.29
SF3B2-205ENST00000526653 KIF22Q14807 665 aa7□□□□□ -1.29
SF3B2-205ENST00000526653 HSP90AB3PQ58FF7 597 aa7□□□□□ -1.29
SF3B2-205ENST00000526653 NFXL1Q6ZNB6 911 aa7□□□□□ -1.29
SF3B2-205ENST00000526653 UBE2Q1Q7Z7E8 422 aa7□□□□□ -1.29
SF3B2-205ENST00000526653 PNISRQ8TF01 805 aaKnown RBP7□□□□□ -1.29
SF3B2-205ENST00000526653 XAGE3Q8WTP9 111 aa7□□□□□ -1.29
SF3B2-205ENST00000526653 CITED4Q96RK1 184 aa7□□□□□ -1.29
SF3B2-205ENST00000526653 ABCB6Q9NP58 842 aa7□□□□□ -1.29
SF3B2-205ENST00000526653 PODXL2Q9NZ53 605 aa7□□□□□ -1.29
SF3B2-205ENST00000526653 RNF114Q9Y508 228 aa7□□□□□ -1.29
SF3B2-205ENST00000526653 IGHA2P01877 340 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 TFRCP02786 760 aaKnown RBP6.99□□□□□ -1.29
SF3B2-205ENST00000526653 GJB1P08034 283 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 ASPAP45381 313 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 PDE3AQ14432 1141 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 SUPT20HL1Q3ZLR7 823 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 DACT2Q5SW24 774 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 NBPF12Q5TAG4 269 aaPredicted RBP6.99□□□□□ -1.29
SF3B2-205ENST00000526653 LRP10Q7Z4F1 713 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 VSIG10LQ86VR7 867 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 APOBEC3FQ8IUX4 373 aaKnown RBP6.99□□□□□ -1.29
SF3B2-205ENST00000526653 KIAA0825Q8IV33 1275 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 FAM43AQ8N2R8 423 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 BRI3BPQ8WY22 251 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 CCDC74AQ96AQ1 378 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 FAM161BQ96MY7 647 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 NIF3L1Q9GZT8 377 aa6.99□□□□□ -1.29
SF3B2-205ENST00000526653 GSX1Q9H4S2 264 aaPredicted RBP6.99□□□□□ -1.29
SF3B2-205ENST00000526653 CCL15-CCL14A0A0B4J2E2 113 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 IRS4O14654 1257 aaPredicted RBP6.98□□□□□ -1.29
SF3B2-205ENST00000526653 FARP2O94887 1054 aaPredicted RBP6.98□□□□□ -1.29
SF3B2-205ENST00000526653 GRK4P32298 578 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 LACTBP83111 547 aaPredicted RBP6.98□□□□□ -1.29
SF3B2-205ENST00000526653 AP3B2Q13367 1082 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 DLGAP5Q15398 846 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 MAP3K11Q16584 847 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 CCL15Q16663 113 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 DUSP27Q5VZP5 1158 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 TTLL5Q6EMB2 1281 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 SEZ6L2Q6UXD5 910 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 ZNF765Q7L2R6 523 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 ANKRD13AQ8IZ07 590 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 RAET1EQ8TD07 263 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 U2AF1L4Q8WU68 220 aaKnown RBP6.98□□□□□ -1.29
SF3B2-205ENST00000526653 JARID2Q92833 1246 aaPredicted RBP6.98□□□□□ -1.29
SF3B2-205ENST00000526653 OPTNQ96CV9 577 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 GDF15Q99988 308 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 WDR18Q9BV38 432 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 DNAJC25Q9H1X3 360 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 BSDC1Q9NW68 430 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms