RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 ATP2A2P16615 1042 aaKnown RBP13.77□□□□□ -0.21
CAPN1-204ENST00000526468 NEDD4P46934 1319 aa13.77□□□□□ -0.21
CAPN1-204ENST00000526468 PDE1AP54750 535 aa13.77□□□□□ -0.21
CAPN1-204ENST00000526468 ZNF543Q08ER8 600 aa13.77□□□□□ -0.21
CAPN1-204ENST00000526468 PWP2Q15269 919 aaKnown RBP13.77□□□□□ -0.21
CAPN1-204ENST00000526468 ALX1Q15699 326 aa13.77□□□□□ -0.21
CAPN1-204ENST00000526468 USH1GQ495M9 461 aa13.77□□□□□ -0.21
CAPN1-204ENST00000526468 MCMDC2Q4G0Z9 681 aa13.77□□□□□ -0.21
CAPN1-204ENST00000526468 TBC1D10CQ8IV04 446 aa13.77□□□□□ -0.21
CAPN1-204ENST00000526468 PPP1R13LQ8WUF5 828 aa13.77□□□□□ -0.21
CAPN1-204ENST00000526468 CRBNQ96SW2 442 aa13.77□□□□□ -0.21
CAPN1-204ENST00000526468 MTG1Q9BT17 334 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-204ENST00000526468 PNMA2Q9UL42 364 aa13.77□□□□□ -0.21
CAPN1-204ENST00000526468 TRIM6-TRIM34B2RNG4 842 aa13.76□□□□□ -0.21
CAPN1-204ENST00000526468 FGAP02671 866 aa13.76□□□□□ -0.21
CAPN1-204ENST00000526468 FGRP09769 529 aa13.76□□□□□ -0.21
CAPN1-204ENST00000526468 SUPT20HL2P0C7V6 817 aa13.76□□□□□ -0.21
CAPN1-204ENST00000526468 HSPD1P10809 573 aaKnown RBP13.76□□□□□ -0.21
CAPN1-204ENST00000526468 MYOGP15173 224 aa13.76□□□□□ -0.21
CAPN1-204ENST00000526468 CHMP4BP1P59074 171 aa13.76□□□□□ -0.21
CAPN1-204ENST00000526468 RPS6P62753 249 aaKnown RBP13.76□□□□□ -0.21
CAPN1-204ENST00000526468 TTLL4Q14679 1199 aa13.76□□□□□ -0.21
CAPN1-204ENST00000526468 ADAMTS19Q8TE59 1207 aa13.76□□□□□ -0.21
CAPN1-204ENST00000526468 SCFD2Q8WU76 684 aa13.76□□□□□ -0.21
CAPN1-204ENST00000526468 CLEC4DQ8WXI8 215 aa13.76□□□□□ -0.21
CAPN1-204ENST00000526468 NOD1Q9Y239 953 aa13.76□□□□□ -0.21
CAPN1-204ENST00000526468 PCDHA11Q9Y5I1 949 aa13.76□□□□□ -0.21
CAPN1-204ENST00000526468 NKRFO15226 690 aaKnown RBP eCLIP13.75□□□□□ -0.21
CAPN1-204ENST00000526468 ACTN1P12814 892 aa13.75□□□□□ -0.21
CAPN1-204ENST00000526468 MFSD6Q6ZSS7 791 aa13.75□□□□□ -0.21
CAPN1-204ENST00000526468 ATXN2LQ8WWM7 1075 aaKnown RBP13.75□□□□□ -0.21
CAPN1-204ENST00000526468 COPS5Q92905 334 aa13.75□□□□□ -0.21
CAPN1-204ENST00000526468 RNF41Q9H4P4 317 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-204ENST00000526468 TCP11L1Q9NUJ3 509 aa13.75□□□□□ -0.21
CAPN1-204ENST00000526468 RBM47A0AV96 593 aaKnown RBP13.74□□□□□ -0.21
CAPN1-204ENST00000526468 B4DLN1 442 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 CA3P07451 260 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 GOLGA8HP0CJ92 632 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 TXNP10599 105 aaKnown RBP13.74□□□□□ -0.21
CAPN1-204ENST00000526468 PCP11498 1178 aaKnown RBP13.74□□□□□ -0.21
CAPN1-204ENST00000526468 EDNRBP24530 442 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 MRPL12P52815 198 aaKnown RBP13.74□□□□□ -0.21
CAPN1-204ENST00000526468 MRPS5P82675 430 aaKnown RBP13.74□□□□□ -0.21
CAPN1-204ENST00000526468 CDC37Q16543 378 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-204ENST00000526468 NBPF20Q3BBV1 942 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 DNERQ8NFT8 737 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 ESR2Q92731 530 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 RILPL2Q969X0 211 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 ASB2Q96Q27 587 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 SLC9A7Q96T83 725 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 ZKSCAN3Q9BRR0 538 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 LNPKQ9C0E8 428 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 TSPYL2Q9H2G4 693 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-204ENST00000526468 CPVLQ9H3G5 476 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 KIAA1671Q9BY89 1806 aa13.74□□□□□ -0.21
CAPN1-204ENST00000526468 PITPNM1O00562 1244 aa13.73□□□□□ -0.21
CAPN1-204ENST00000526468 DHX16O60231 1041 aaKnown RBP13.73□□□□□ -0.21
CAPN1-204ENST00000526468 SNHG28P0DPA3 235 aa13.73□□□□□ -0.21
CAPN1-204ENST00000526468 RFC2P35250 354 aa13.73□□□□□ -0.21
CAPN1-204ENST00000526468 MFAP1P55081 439 aaKnown RBP13.73□□□□□ -0.21
CAPN1-204ENST00000526468 HDAC1Q13547 482 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-204ENST00000526468 SKIV2LQ15477 1246 aaKnown RBP13.73□□□□□ -0.21
CAPN1-204ENST00000526468 TMEM67Q5HYA8 995 aa13.73□□□□□ -0.21
CAPN1-204ENST00000526468 GPATCH4Q5T3I0 446 aaKnown RBP13.73□□□□□ -0.21
CAPN1-204ENST00000526468 NFRKBQ6P4R8 1299 aa13.73□□□□□ -0.21
CAPN1-204ENST00000526468 CCDC155Q8N6L0 562 aa13.73□□□□□ -0.21
CAPN1-204ENST00000526468 VWCEQ96DN2 955 aa13.73□□□□□ -0.21
CAPN1-204ENST00000526468 UHRF1Q96T88 793 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-204ENST00000526468 FTOQ9C0B1 505 aaKnown RBP eCLIP13.73□□□□□ -0.21
CAPN1-204ENST00000526468 MYO7AQ13402 2215 aa13.73□□□□□ -0.21
CAPN1-204ENST00000526468 ABCB11O95342 1321 aa13.72□□□□□ -0.21
CAPN1-204ENST00000526468 ARIH2O95376 493 aa13.72□□□□□ -0.21
CAPN1-204ENST00000526468 MMP3P08254 477 aa13.72□□□□□ -0.21
CAPN1-204ENST00000526468 BFSP2Q13515 415 aa13.72□□□□□ -0.21
CAPN1-204ENST00000526468 RETREG2Q8NC44 543 aa13.72□□□□□ -0.21
CAPN1-204ENST00000526468 CERS4Q9HA82 394 aa13.72□□□□□ -0.21
CAPN1-204ENST00000526468 A6NJR5 290 aa13.71□□□□□ -0.21
CAPN1-204ENST00000526468 GTPBP6O43824 516 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-204ENST00000526468 KPNA6O60684 536 aa13.71□□□□□ -0.21
CAPN1-204ENST00000526468 KDM4AO75164 1064 aa13.71□□□□□ -0.21
CAPN1-204ENST00000526468 KCNJ6P48051 423 aa13.71□□□□□ -0.21
CAPN1-204ENST00000526468 PTPN11Q06124 597 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-204ENST00000526468 SEPT14Q6ZU15 432 aa13.71□□□□□ -0.21
CAPN1-204ENST00000526468 IQCA1Q86XH1 822 aa13.71□□□□□ -0.21
CAPN1-204ENST00000526468 PNMA1Q8ND90 353 aa13.71□□□□□ -0.21
CAPN1-204ENST00000526468 TTC14Q96N46 770 aa13.71□□□□□ -0.21
CAPN1-204ENST00000526468 UBA5Q9GZZ9 404 aa13.71□□□□□ -0.21
CAPN1-204ENST00000526468 KAT14Q9H8E8 782 aa13.71□□□□□ -0.21
CAPN1-204ENST00000526468 DIAPH3Q9NSV4 1193 aa13.71□□□□□ -0.21
CAPN1-204ENST00000526468 GH1P01241 217 aa13.7□□□□□ -0.22
CAPN1-204ENST00000526468 IQCF3P0C7M6 154 aa13.7□□□□□ -0.22
CAPN1-204ENST00000526468 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-204ENST00000526468 PTGISQ16647 500 aa13.7□□□□□ -0.22
CAPN1-204ENST00000526468 CHST3Q7LGC8 479 aa13.7□□□□□ -0.22
CAPN1-204ENST00000526468 TICAM2Q86XR7 235 aa13.7□□□□□ -0.22
CAPN1-204ENST00000526468 AFG1LQ8WV93 481 aa13.7□□□□□ -0.22
CAPN1-204ENST00000526468 ARNTL2Q8WYA1 636 aa13.7□□□□□ -0.22
CAPN1-204ENST00000526468 XIRP2A4UGR9 3374 aa13.7□□□□□ -0.22
CAPN1-204ENST00000526468 EPOPA6NHQ4 379 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 B4E1Z4 1266 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms