RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 TYW1BQ6NUM6 668 aa20.65■□□□□ 0.9
CLK4-211ENST00000522556 NOL8Q76FK4 1167 aaKnown RBP20.65■□□□□ 0.9
CLK4-211ENST00000522556 TLK2Q86UE8 772 aa20.65■□□□□ 0.9
CLK4-211ENST00000522556 FCHSD1Q86WN1 690 aa20.65■□□□□ 0.9
CLK4-211ENST00000522556 COPS5Q92905 334 aa20.65■□□□□ 0.9
CLK4-211ENST00000522556 PXMP2Q9NR77 195 aa20.65■□□□□ 0.9
CLK4-211ENST00000522556 SEC63Q9UGP8 760 aaKnown RBP20.65■□□□□ 0.9
CLK4-211ENST00000522556 ZMYND8Q9ULU4 1186 aaPredicted RBP20.65■□□□□ 0.9
CLK4-211ENST00000522556 PHF24Q9UPV7 400 aa20.65■□□□□ 0.9
CLK4-211ENST00000522556 NID2Q14112 1375 aa20.64■□□□□ 0.89
CLK4-211ENST00000522556 A0A1W2PQ45 241 aaPredicted RBP20.64■□□□□ 0.89
CLK4-211ENST00000522556 A0A1W2PQY0 241 aa20.64■□□□□ 0.89
CLK4-211ENST00000522556 SYN1P17600 705 aa20.64■□□□□ 0.89
CLK4-211ENST00000522556 GJA9P57773 515 aa20.64■□□□□ 0.89
CLK4-211ENST00000522556 KCNA10Q16322 511 aa20.64■□□□□ 0.89
CLK4-211ENST00000522556 C8orf34Q49A92 452 aa20.64■□□□□ 0.89
CLK4-211ENST00000522556 USP17L6PQ6QN14 398 aa20.64■□□□□ 0.89
CLK4-211ENST00000522556 RNF180Q86T96 592 aa20.64■□□□□ 0.89
CLK4-211ENST00000522556 NCOA5Q9HCD5 579 aaKnown RBP20.64■□□□□ 0.89
CLK4-211ENST00000522556 CEP290O15078 2479 aa20.64■□□□□ 0.89
CLK4-211ENST00000522556 LOC102724159A0A0B4J2E5 919 aa20.63■□□□□ 0.89
CLK4-211ENST00000522556 RBM47A0AV96 593 aaKnown RBP20.63■□□□□ 0.89
CLK4-211ENST00000522556 GCOM1H8Y6P7 765 aaPredicted RBP20.63■□□□□ 0.89
CLK4-211ENST00000522556 POLR2MP0CAP2 368 aa20.63■□□□□ 0.89
CLK4-211ENST00000522556 METAP2P50579 478 aaKnown RBP eCLIP20.63■□□□□ 0.89
CLK4-211ENST00000522556 RTP1P59025 263 aa20.63■□□□□ 0.89
CLK4-211ENST00000522556 PWP2Q15269 919 aaKnown RBP20.63■□□□□ 0.89
CLK4-211ENST00000522556 ARHGEF16Q5VV41 709 aa20.63■□□□□ 0.89
CLK4-211ENST00000522556 WWC2Q6AWC2 1192 aa20.63■□□□□ 0.89
CLK4-211ENST00000522556 FBXL16Q8N461 479 aa20.63■□□□□ 0.89
CLK4-211ENST00000522556 NSUN6Q8TEA1 469 aaKnown RBP20.63■□□□□ 0.89
CLK4-211ENST00000522556 WDR11Q9BZH6 1224 aa20.63■□□□□ 0.89
CLK4-211ENST00000522556 RBM28Q9NW13 759 aaKnown RBP20.63■□□□□ 0.89
CLK4-211ENST00000522556 MEIS2O14770 477 aa20.62■□□□□ 0.89
CLK4-211ENST00000522556 DYNC1LI2O43237 492 aaPredicted RBP20.62■□□□□ 0.89
CLK4-211ENST00000522556 NR3C2P08235 984 aa20.62■□□□□ 0.89
CLK4-211ENST00000522556 CST5P28325 142 aaPredicted RBP20.62■□□□□ 0.89
CLK4-211ENST00000522556 ACLYP53396 1101 aa20.62■□□□□ 0.89
CLK4-211ENST00000522556 TRIM60Q495X7 471 aa20.62■□□□□ 0.89
CLK4-211ENST00000522556 SLC39A5Q6ZMH5 540 aa20.62■□□□□ 0.89
CLK4-211ENST00000522556 SEPT14Q6ZU15 432 aa20.62■□□□□ 0.89
CLK4-211ENST00000522556 HEATR3Q7Z4Q2 680 aa20.62■□□□□ 0.89
CLK4-211ENST00000522556 PDCD2LQ9BRP1 358 aa20.62■□□□□ 0.89
CLK4-211ENST00000522556 TM6SF1Q9BZW5 370 aa20.62■□□□□ 0.89
CLK4-211ENST00000522556 CYP46A1Q9Y6A2 500 aa20.62■□□□□ 0.89
CLK4-211ENST00000522556 LTBP2Q14767 1821 aa20.62■□□□□ 0.89
CLK4-211ENST00000522556 DOCK5Q9H7D0 1870 aa20.61■□□□□ 0.89
CLK4-211ENST00000522556 DTNBO60941 627 aa20.61■□□□□ 0.89
CLK4-211ENST00000522556 RGS20O76081 388 aa20.61■□□□□ 0.89
CLK4-211ENST00000522556 ASGR1P07306 291 aa20.61■□□□□ 0.89
CLK4-211ENST00000522556 CCT2P78371 535 aaKnown RBP20.61■□□□□ 0.89
CLK4-211ENST00000522556 PGM5Q15124 567 aa20.61■□□□□ 0.89
CLK4-211ENST00000522556 UBE2SQ16763 222 aa20.61■□□□□ 0.89
CLK4-211ENST00000522556 DUSP28Q4G0W2 176 aa20.61■□□□□ 0.89
CLK4-211ENST00000522556 GNASQ5JWF2 1037 aa20.61■□□□□ 0.89
CLK4-211ENST00000522556 IQSEC1Q6DN90 963 aa20.61■□□□□ 0.89
CLK4-211ENST00000522556 V9GY48 417 aaPredicted RBP20.61■□□□□ 0.89
CLK4-211ENST00000522556 ADAMTS3O15072 1205 aa20.6■□□□□ 0.89
CLK4-211ENST00000522556 MYCLP12524 364 aaPredicted RBP20.6■□□□□ 0.89
CLK4-211ENST00000522556 PDIA3P30101 505 aaKnown RBP20.6■□□□□ 0.89
CLK4-211ENST00000522556 RCAN1P53805 252 aa20.6■□□□□ 0.89
CLK4-211ENST00000522556 EVCP57679 992 aa20.6■□□□□ 0.89
CLK4-211ENST00000522556 NKX3-2P78367 333 aa20.6■□□□□ 0.89
CLK4-211ENST00000522556 SNX17Q15036 470 aa20.6■□□□□ 0.89
CLK4-211ENST00000522556 FSCN1Q16658 493 aaKnown RBP20.6■□□□□ 0.89
CLK4-211ENST00000522556 CCDC62Q6P9F0 684 aa20.6■□□□□ 0.89
CLK4-211ENST00000522556 PHKBQ93100 1093 aa20.6■□□□□ 0.89
CLK4-211ENST00000522556 MAF1Q9H063 256 aa20.6■□□□□ 0.89
CLK4-211ENST00000522556 ATP11BQ9Y2G3 1177 aa20.6■□□□□ 0.89
CLK4-211ENST00000522556 FRMPD4Q14CM0 1322 aa20.59■□□□□ 0.89
CLK4-211ENST00000522556 STXBP3O00186 592 aa20.59■□□□□ 0.89
CLK4-211ENST00000522556 PPP2R5BQ15173 497 aa20.59■□□□□ 0.89
CLK4-211ENST00000522556 NTRK3Q16288 839 aa20.59■□□□□ 0.89
CLK4-211ENST00000522556 LY6KQ17RY6 165 aa20.59■□□□□ 0.89
CLK4-211ENST00000522556 CXCL17Q6UXB2 119 aa20.59■□□□□ 0.89
CLK4-211ENST00000522556 SCFD2Q8WU76 684 aa20.59■□□□□ 0.89
CLK4-211ENST00000522556 IWS1Q96ST2 819 aa20.59■□□□□ 0.89
CLK4-211ENST00000522556 TSEN34Q9BSV6 310 aaKnown RBP20.59■□□□□ 0.89
CLK4-211ENST00000522556 PDRG1Q9NUG6 133 aa20.59■□□□□ 0.89
CLK4-211ENST00000522556 SORBS3O60504 671 aa20.58■□□□□ 0.89
CLK4-211ENST00000522556 TXNP10599 105 aaKnown RBP20.58■□□□□ 0.89
CLK4-211ENST00000522556 TRAF1Q13077 416 aa20.58■□□□□ 0.89
CLK4-211ENST00000522556 STXBP2Q15833 593 aa20.58■□□□□ 0.89
CLK4-211ENST00000522556 OR6J1Q8NGC5 347 aa20.58■□□□□ 0.89
CLK4-211ENST00000522556 PPP1R13LQ8WUF5 828 aa20.58■□□□□ 0.89
CLK4-211ENST00000522556 MAP3K20Q9NYL2 800 aaKnown RBP20.58■□□□□ 0.89
CLK4-211ENST00000522556 NR2E3Q9Y5X4 410 aa20.58■□□□□ 0.89
CLK4-211ENST00000522556 MYH7BA7E2Y1 1941 aa20.58■□□□□ 0.88
CLK4-211ENST00000522556 MRPS9P82933 396 aaKnown RBP20.57■□□□□ 0.88
CLK4-211ENST00000522556 STK3Q13188 491 aa20.57■□□□□ 0.88
CLK4-211ENST00000522556 PKN1Q16512 942 aa20.57■□□□□ 0.88
CLK4-211ENST00000522556 CHRDL2Q6WN34 429 aa20.57■□□□□ 0.88
CLK4-211ENST00000522556 SH3RF1Q7Z6J0 888 aa20.57■□□□□ 0.88
CLK4-211ENST00000522556 SMARCC2Q8TAQ2 1214 aa20.57■□□□□ 0.88
CLK4-211ENST00000522556 PGBD1Q96JS3 809 aa20.57■□□□□ 0.88
CLK4-211ENST00000522556 MPHOSPH6Q99547 160 aaKnown RBP20.57■□□□□ 0.88
CLK4-211ENST00000522556 AP5M1Q9H0R1 490 aa20.57■□□□□ 0.88
CLK4-211ENST00000522556 SPC25Q9HBM1 224 aa20.57■□□□□ 0.88
CLK4-211ENST00000522556 STARD7Q9NQZ5 370 aa20.57■□□□□ 0.88
CLK4-211ENST00000522556 COLQQ9Y215 455 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms