RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 ERCC3P19447 782 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 ARHGAP4P98171 946 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 RNF207Q6ZRF8 634 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 RIOX2Q8IUF8 465 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 MB21D1Q8N884 522 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 GOLPH3LQ9H4A5 285 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 CEP350Q5VT06 3117 aa17.12■□□□□ 0.33
SREK1-209ENST00000520953 SREBF1P36956 1147 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 ACAD9Q9H845 621 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 PNMA3Q9UL41 463 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 RABGAP1Q9Y3P9 1069 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 FAM86B1E9PN63 330 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 MBD3O95983 291 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 FAM86B2P0C5J1 330 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 UBE2HP62256 183 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 ERVK-9P63128 1117 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 ERVK-24P63145 666 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 ATP2C1P98194 919 aaPredicted RBP17.11■□□□□ 0.33
SREK1-209ENST00000520953 GHRHRQ02643 423 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 MCF2L2Q86YR7 1114 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 CYP39A1Q9NYL5 469 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 TMEM63CQ9P1W3 806 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 SLC45A1Q9Y2W3 748 aa17.11■□□□□ 0.33
SREK1-209ENST00000520953 MANSC4A6NHS7 340 aaPredicted RBP17.1■□□□□ 0.33
SREK1-209ENST00000520953 USP49Q70CQ1 688 aa17.1■□□□□ 0.33
SREK1-209ENST00000520953 EFCC1Q9HA90 598 aa17.1■□□□□ 0.33
SREK1-209ENST00000520953 ASTN1O14525 1302 aa17.1■□□□□ 0.33
SREK1-209ENST00000520953 PPP6R2O75170 966 aa17.09■□□□□ 0.33
SREK1-209ENST00000520953 FOSP01100 380 aaPredicted RBP17.09■□□□□ 0.33
SREK1-209ENST00000520953 EIF2AK2P19525 551 aaKnown RBP17.09■□□□□ 0.33
SREK1-209ENST00000520953 CSPP1Q1MSJ5 1256 aa17.09■□□□□ 0.33
SREK1-209ENST00000520953 SHC4Q6S5L8 630 aa17.09■□□□□ 0.33
SREK1-209ENST00000520953 IFNL1Q8IU54 200 aa17.09■□□□□ 0.33
SREK1-209ENST00000520953 CCDC102AQ96A19 550 aa17.09■□□□□ 0.33
SREK1-209ENST00000520953 CPA4Q9UI42 421 aa17.09■□□□□ 0.33
SREK1-209ENST00000520953 PTPREP23469 700 aa17.09■□□□□ 0.33
SREK1-209ENST00000520953 APLP1P51693 650 aa17.09■□□□□ 0.33
SREK1-209ENST00000520953 CNTN2Q02246 1040 aa17.09■□□□□ 0.33
SREK1-209ENST00000520953 A0A1B0GVL5 298 aa17.08■□□□□ 0.33
SREK1-209ENST00000520953 VWA3AA6NCI4 1184 aa17.08■□□□□ 0.33
SREK1-209ENST00000520953 NEMFO60524 1076 aa17.08■□□□□ 0.33
SREK1-209ENST00000520953 WDR78Q5VTH9 848 aa17.08■□□□□ 0.33
SREK1-209ENST00000520953 CCAR1Q8IX12 1150 aaKnown RBP17.08■□□□□ 0.33
SREK1-209ENST00000520953 KRI1Q8N9T8 703 aaKnown RBP17.08■□□□□ 0.33
SREK1-209ENST00000520953 LENG9Q96B70 501 aa17.08■□□□□ 0.33
SREK1-209ENST00000520953 PARK7Q99497 189 aaKnown RBP17.08■□□□□ 0.33
SREK1-209ENST00000520953 CSRNP2Q9H175 543 aa17.08■□□□□ 0.33
SREK1-209ENST00000520953 DDX25Q9UHL0 483 aaKnown RBP17.08■□□□□ 0.33
SREK1-209ENST00000520953 RPTORQ8N122 1335 aa17.08■□□□□ 0.32
SREK1-209ENST00000520953 CENPFP49454 3210 aa17.08■□□□□ 0.32
SREK1-209ENST00000520953 TKFCQ3LXA3 575 aa17.08■□□□□ 0.32
SREK1-209ENST00000520953 ADALQ6DHV7 355 aa17.08■□□□□ 0.32
SREK1-209ENST00000520953 ANKRD35Q8N283 1001 aa17.08■□□□□ 0.32
SREK1-209ENST00000520953 FSIP1Q8NA03 581 aa17.08■□□□□ 0.32
SREK1-209ENST00000520953 CHST13Q8NET6 341 aa17.08■□□□□ 0.32
SREK1-209ENST00000520953 RMDN3Q96TC7 470 aa17.08■□□□□ 0.32
SREK1-209ENST00000520953 PNMA2Q9UL42 364 aa17.08■□□□□ 0.32
SREK1-209ENST00000520953 CEP131Q9UPN4 1083 aa17.08■□□□□ 0.32
SREK1-209ENST00000520953 SRPRBQ9Y5M8 271 aaKnown RBP17.08■□□□□ 0.32
SREK1-209ENST00000520953 GOLGA6L4A6NEF3 574 aa17.07■□□□□ 0.32
SREK1-209ENST00000520953 PGK2P07205 417 aa17.07■□□□□ 0.32
SREK1-209ENST00000520953 CDC25AP30304 524 aa17.07■□□□□ 0.32
SREK1-209ENST00000520953 TAF1CQ15572 869 aaPredicted RBP17.07■□□□□ 0.32
SREK1-209ENST00000520953 PRR16Q569H4 304 aa17.07■□□□□ 0.32
SREK1-209ENST00000520953 PPP4R3AQ6IN85 833 aa17.07■□□□□ 0.32
SREK1-209ENST00000520953 GPRC5AQ8NFJ5 357 aa17.07■□□□□ 0.32
SREK1-209ENST00000520953 HAS1Q92839 578 aa17.07■□□□□ 0.32
SREK1-209ENST00000520953 HHIPL1Q96JK4 782 aa17.07■□□□□ 0.32
SREK1-209ENST00000520953 CAPNS2Q96L46 248 aa17.07■□□□□ 0.32
SREK1-209ENST00000520953 CREBZFQ9NS37 354 aa17.07■□□□□ 0.32
SREK1-209ENST00000520953 ADGRA2Q96PE1 1338 aa17.07■□□□□ 0.32
SREK1-209ENST00000520953 RASSF10A6NK89 507 aa17.06■□□□□ 0.32
SREK1-209ENST00000520953 PP2D1A8MPX8 630 aa17.06■□□□□ 0.32
SREK1-209ENST00000520953 NR1I2O75469 434 aa17.06■□□□□ 0.32
SREK1-209ENST00000520953 USP11P51784 963 aa17.06■□□□□ 0.32
SREK1-209ENST00000520953 MRPS9P82933 396 aaKnown RBP17.06■□□□□ 0.32
SREK1-209ENST00000520953 MTMR9Q96QG7 549 aa17.06■□□□□ 0.32
SREK1-209ENST00000520953 PXMP2Q9NR77 195 aa17.06■□□□□ 0.32
SREK1-209ENST00000520953 IGLV3-22A0A075B6J6 115 aa17.06■□□□□ 0.32
SREK1-209ENST00000520953 OR52Z1P0C646 297 aa17.06■□□□□ 0.32
SREK1-209ENST00000520953 NDUFA8P51970 172 aa17.06■□□□□ 0.32
SREK1-209ENST00000520953 DEFB115Q30KQ5 88 aa17.06■□□□□ 0.32
SREK1-209ENST00000520953 EPSTI1Q96J88 318 aa17.06■□□□□ 0.32
SREK1-209ENST00000520953 MBOAT7Q96N66 472 aa17.06■□□□□ 0.32
SREK1-209ENST00000520953 CYP3A7-CYP3A51PA0A087WV96 503 aa17.05■□□□□ 0.32
SREK1-209ENST00000520953 CYP3A4P08684 503 aa17.05■□□□□ 0.32
SREK1-209ENST00000520953 MYCLP12524 364 aaPredicted RBP17.05■□□□□ 0.32
SREK1-209ENST00000520953 CYP3A7P24462 503 aa17.05■□□□□ 0.32
SREK1-209ENST00000520953 TXKP42681 527 aa17.05■□□□□ 0.32
SREK1-209ENST00000520953 PGM5Q15124 567 aa17.05■□□□□ 0.32
SREK1-209ENST00000520953 CALCRLQ16602 461 aa17.05■□□□□ 0.32
SREK1-209ENST00000520953 JMYQ8N9B5 988 aa17.05■□□□□ 0.32
SREK1-209ENST00000520953 PDCD2LQ9BRP1 358 aa17.05■□□□□ 0.32
SREK1-209ENST00000520953 RTN4Q9NQC3 1192 aaKnown RBP17.05■□□□□ 0.32
SREK1-209ENST00000520953 MORF4L1Q9UBU8 362 aa17.05■□□□□ 0.32
SREK1-209ENST00000520953 FRMPD4Q14CM0 1322 aa17.05■□□□□ 0.32
SREK1-209ENST00000520953 CUTAO60888 179 aa17.05■□□□□ 0.32
SREK1-209ENST00000520953 ITGB5P18084 799 aa17.05■□□□□ 0.32
SREK1-209ENST00000520953 CIITAP33076 1130 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms