RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 SNHG28P0DPA3 235 aa23.49■■□□□ 1.35
HDAC2-207ENST00000520170 TXNP10599 105 aaKnown RBP23.49■■□□□ 1.35
HDAC2-207ENST00000520170 PCP11498 1178 aaKnown RBP23.49■■□□□ 1.35
HDAC2-207ENST00000520170 EDNRBP24530 442 aa23.49■■□□□ 1.35
HDAC2-207ENST00000520170 CHMP4BP1P59074 171 aa23.49■■□□□ 1.35
HDAC2-207ENST00000520170 TICAM2Q86XR7 235 aa23.49■■□□□ 1.35
HDAC2-207ENST00000520170 TET1Q8NFU7 2136 aa23.49■■□□□ 1.35
HDAC2-207ENST00000520170 ASB2Q96Q27 587 aa23.49■■□□□ 1.35
HDAC2-207ENST00000520170 UBA5Q9GZZ9 404 aa23.49■■□□□ 1.35
HDAC2-207ENST00000520170 CPVLQ9H3G5 476 aa23.49■■□□□ 1.35
HDAC2-207ENST00000520170 TCF20Q9UGU0 1960 aaKnown RBP23.49■■□□□ 1.35
HDAC2-207ENST00000520170 B4DLN1 442 aa23.48■■□□□ 1.35
HDAC2-207ENST00000520170 KPNA6O60684 536 aa23.48■■□□□ 1.35
HDAC2-207ENST00000520170 MRPL12P52815 198 aaKnown RBP23.48■■□□□ 1.35
HDAC2-207ENST00000520170 MICALL1Q8N3F8 863 aa23.48■■□□□ 1.35
HDAC2-207ENST00000520170 ESR2Q92731 530 aa23.48■■□□□ 1.35
HDAC2-207ENST00000520170 RNF41Q9H4P4 317 aaPredicted RBP23.48■■□□□ 1.35
HDAC2-207ENST00000520170 NCOR1O75376 2440 aa23.47■■□□□ 1.35
HDAC2-207ENST00000520170 A6NJR5 290 aa23.47■■□□□ 1.35
HDAC2-207ENST00000520170 MRPS5P82675 430 aaKnown RBP23.47■■□□□ 1.35
HDAC2-207ENST00000520170 GPATCH4Q5T3I0 446 aaKnown RBP23.47■■□□□ 1.35
HDAC2-207ENST00000520170 NFRKBQ6P4R8 1299 aa23.47■■□□□ 1.35
HDAC2-207ENST00000520170 RETREG2Q8NC44 543 aa23.47■■□□□ 1.35
HDAC2-207ENST00000520170 NEDD4P46934 1319 aa23.47■■□□□ 1.35
HDAC2-207ENST00000520170 KIAA1217Q5T5P2 1943 aa23.47■■□□□ 1.35
HDAC2-207ENST00000520170 ARIH2O95376 493 aa23.46■■□□□ 1.35
HDAC2-207ENST00000520170 ACTN1P12814 892 aa23.46■■□□□ 1.35
HDAC2-207ENST00000520170 MFAP1P55081 439 aaKnown RBP23.46■■□□□ 1.35
HDAC2-207ENST00000520170 TMEM67Q5HYA8 995 aa23.46■■□□□ 1.35
HDAC2-207ENST00000520170 TRANK1O15050 2925 aa23.46■■□□□ 1.35
HDAC2-207ENST00000520170 PRRC2BQ5JSZ5 2229 aaKnown RBP23.45■■□□□ 1.35
HDAC2-207ENST00000520170 TANC1Q9C0D5 1861 aa23.45■■□□□ 1.35
HDAC2-207ENST00000520170 ZNF213O14771 459 aa23.45■■□□□ 1.34
HDAC2-207ENST00000520170 SDSP20132 328 aa23.45■■□□□ 1.34
HDAC2-207ENST00000520170 B4GALNT3Q6L9W6 998 aa23.45■■□□□ 1.34
HDAC2-207ENST00000520170 RGS22Q8NE09 1264 aa23.45■■□□□ 1.34
HDAC2-207ENST00000520170 TBC1D5Q92609 795 aa23.45■■□□□ 1.34
HDAC2-207ENST00000520170 FTOQ9C0B1 505 aaKnown RBP eCLIP23.45■■□□□ 1.346e-11■□□□□ 8.1
HDAC2-207ENST00000520170 NOD1Q9Y239 953 aa23.45■■□□□ 1.34
HDAC2-207ENST00000520170 MYH7BA7E2Y1 1941 aa23.45■■□□□ 1.34
HDAC2-207ENST00000520170 LAMA4Q16363 1823 aa23.45■■□□□ 1.34
HDAC2-207ENST00000520170 IQCF3P0C7M6 154 aa23.44■■□□□ 1.34
HDAC2-207ENST00000520170 RFC2P35250 354 aa23.44■■□□□ 1.34
HDAC2-207ENST00000520170 CDC37Q16543 378 aaPredicted RBP23.44■■□□□ 1.34
HDAC2-207ENST00000520170 DGKHQ86XP1 1220 aa23.44■■□□□ 1.34
HDAC2-207ENST00000520170 PNMA1Q8ND90 353 aa23.44■■□□□ 1.34
HDAC2-207ENST00000520170 IL27Q8NEV9 243 aa23.44■■□□□ 1.34
HDAC2-207ENST00000520170 ADAMTS19Q8TE59 1207 aa23.44■■□□□ 1.34
HDAC2-207ENST00000520170 TSPYL2Q9H2G4 693 aaPredicted RBP23.44■■□□□ 1.34
HDAC2-207ENST00000520170 RFXAPO00287 272 aa23.43■■□□□ 1.34
HDAC2-207ENST00000520170 PITPNM1O00562 1244 aa23.43■■□□□ 1.34
HDAC2-207ENST00000520170 CA3P07451 260 aa23.43■■□□□ 1.34
HDAC2-207ENST00000520170 PTPN11Q06124 597 aaPredicted RBP23.43■■□□□ 1.34
HDAC2-207ENST00000520170 BFSP2Q13515 415 aa23.43■■□□□ 1.34
HDAC2-207ENST00000520170 SEPT14Q6ZU15 432 aa23.43■■□□□ 1.34
HDAC2-207ENST00000520170 IQCA1Q86XH1 822 aa23.43■■□□□ 1.34
HDAC2-207ENST00000520170 AFG1LQ8WV93 481 aa23.43■■□□□ 1.34
HDAC2-207ENST00000520170 TAAR1Q96RJ0 339 aa23.43■■□□□ 1.34
HDAC2-207ENST00000520170 KAT14Q9H8E8 782 aa23.43■■□□□ 1.34
HDAC2-207ENST00000520170 CERS4Q9HA82 394 aa23.43■■□□□ 1.34
HDAC2-207ENST00000520170 KDM4AO75164 1064 aa23.42■■□□□ 1.34
HDAC2-207ENST00000520170 LY6KQ17RY6 165 aa23.42■■□□□ 1.34
HDAC2-207ENST00000520170 CCDC62Q6P9F0 684 aa23.42■■□□□ 1.34
HDAC2-207ENST00000520170 CWC27Q6UX04 472 aaKnown RBP23.42■■□□□ 1.34
HDAC2-207ENST00000520170 CHST3Q7LGC8 479 aa23.42■■□□□ 1.34
HDAC2-207ENST00000520170 ADGRF4Q8IZF3 695 aa23.42■■□□□ 1.34
HDAC2-207ENST00000520170 ABCB11O95342 1321 aa23.41■■□□□ 1.34
HDAC2-207ENST00000520170 B4E1Z4 1266 aa23.41■■□□□ 1.34
HDAC2-207ENST00000520170 DHX16O60231 1041 aaKnown RBP23.41■■□□□ 1.34
HDAC2-207ENST00000520170 PTGISQ16647 500 aa23.41■■□□□ 1.34
HDAC2-207ENST00000520170 CCDC178Q5BJE1 867 aa23.41■■□□□ 1.34
HDAC2-207ENST00000520170 SYTL5Q8TDW5 730 aaPredicted RBP23.41■■□□□ 1.34
HDAC2-207ENST00000520170 NSUN6Q8TEA1 469 aaKnown RBP23.41■■□□□ 1.34
HDAC2-207ENST00000520170 SLC9A7Q96T83 725 aa23.41■■□□□ 1.34
HDAC2-207ENST00000520170 VAT1LQ9HCJ6 419 aa23.41■■□□□ 1.34
HDAC2-207ENST00000520170 COL20A1Q9P218 1284 aa23.41■■□□□ 1.34
HDAC2-207ENST00000520170 GH1P01241 217 aa23.4■■□□□ 1.34
HDAC2-207ENST00000520170 SKIV2LQ15477 1246 aaKnown RBP23.4■■□□□ 1.34
HDAC2-207ENST00000520170 UHRF1Q96T88 793 aaPredicted RBP23.4■■□□□ 1.34
HDAC2-207ENST00000520170 RMDN3Q96TC7 470 aa23.4■■□□□ 1.34
HDAC2-207ENST00000520170 DIAPH3Q9NSV4 1193 aa23.4■■□□□ 1.34
HDAC2-207ENST00000520170 PTPRSQ13332 1948 aa23.39■■□□□ 1.34
HDAC2-207ENST00000520170 MMP3P08254 477 aa23.39■■□□□ 1.33
HDAC2-207ENST00000520170 ARHGAP1Q07960 439 aa23.39■■□□□ 1.33
HDAC2-207ENST00000520170 STXBP2Q15833 593 aa23.39■■□□□ 1.33
HDAC2-207ENST00000520170 QRICH1Q2TAL8 776 aa23.39■■□□□ 1.33
HDAC2-207ENST00000520170 ASPRV1Q53RT3 343 aa23.39■■□□□ 1.33
HDAC2-207ENST00000520170 GDF6Q6KF10 455 aaPredicted RBP23.39■■□□□ 1.33
HDAC2-207ENST00000520170 MCF2L2Q86YR7 1114 aa23.39■■□□□ 1.33
HDAC2-207ENST00000520170 PLEKHM2Q8IWE5 1019 aa23.39■■□□□ 1.33
HDAC2-207ENST00000520170 PHOSPHO2Q8TCD6 241 aa23.39■■□□□ 1.33
HDAC2-207ENST00000520170 ZSCAN10Q96SZ4 725 aaPredicted RBP23.39■■□□□ 1.33
HDAC2-207ENST00000520170 ZSWIM5Q9P217 1185 aa23.39■■□□□ 1.33
HDAC2-207ENST00000520170 XIRP2A4UGR9 3374 aa23.39■■□□□ 1.33
HDAC2-207ENST00000520170 GTPBP6O43824 516 aaPredicted RBP23.38■■□□□ 1.33
HDAC2-207ENST00000520170 TFF2Q03403 129 aa23.38■■□□□ 1.33
HDAC2-207ENST00000520170 FBXO11Q86XK2 927 aa23.38■■□□□ 1.33
HDAC2-207ENST00000520170 HERC6Q8IVU3 1022 aa23.38■■□□□ 1.33
HDAC2-207ENST00000520170 SMC5Q8IY18 1101 aa23.38■■□□□ 1.33
HDAC2-207ENST00000520170 CCDC155Q8N6L0 562 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms